Sandra Bond

Detailed and accurate historical data are crucial to characterizing landscape change, whether it is caused by natural phenomena or of anthropogenic origin. Aerial imagery has been periodically collected by government and nongovernment agencies, for a broad range of purposes, since the early 20th century. The acquisition of aerial images involves using standardized equipment with large-format, carefully calibrated cameras and lens assemblies. Historical archives of aerial images preserve a record of the landscape and are invaluable sources of information that predate satellite and lidar. Structure from motion (SfM) aided photogrammetry provides an efficient means for creating digital three-dimensional data from the vast archives of historical aerial imagery.This report presents techniques, methods, best practices, and a standard workflow for creating point clouds, digital elevation models, and orthomosaic digital scans of overlapping (stereographic) vertical aerial photographs using photogrammetry software. A list of critical issues relevant to SfM-aided photogrammetry of historical aerial imagery is provided, along with potential contingencies and solutions. The workflow was tested in many geographic study areas and with historical imagery datasets of different scales and sources. Three case studies are included. By integrating known SfM methods, these procedures enable the consistent and optimal extraction of historical quantitative data from archives like the U.S. Geological Survey (USGS) Aerial Photo Single Frame archive in the USGS EarthExplorer data portal.

The U.S. Army Fort Irwin National Training Center (NTC), 120 miles northeast of Los Angeles in the Mojave Desert of California, obtains its potable water supply from the Bicycle Valley and Langford Valley groundwater basins; Langford Valley groundwater basin is further subdivided into the Langford Well Lake and Irwin groundwater subbasins. The Irwin groundwater subbasin contains younger, unconsolidated deposits that have a saturated thickness of as much as 200 feet (ft) and a lower aquifer within older unconsolidated deposits as thick as 650 ft. Groundwater recharge under predevelopment conditions (before 1941) occurred primarily from infiltration of intermittent streamflow in small washes that cross the Irwin groundwater subbasin. Since that time, groundwater recharge has increased because of growth of the NTC in recent years and as a result of other processes, including (1) infiltration of treated wastewater into the aquifer through ponds near the NTC wastewater treatment facility (WWTF) and (2) infiltration of imported water and treated wastewater used for landscape irrigation at base housing and athletic fields.Water samples were collected from 17 wells and analyzed for field parameters, chemical constituents, and isotope composition in the Irwin groundwater subbasin between 2014 and 2019. These data were supplemented with water- chemistry data collected during 1993–95 and at other times if available. Between 1993–95 and 2015–19, median dissolved solids and nitrate concentrations in water from wells in the Irwin groundwater subbasin increased from 620 to 1,030 milligrams per liter (mg/L) and from 2.8 to 4.5 mg/L as nitrogen, respectively. After 2014, dissolved solids and nitrate concentrations in water from wells near the NTC WWTF decreased as a result of changes in source water quality attributable to reverse osmosis of treated drinking water delivered within the Irwin groundwater subbasin and to increased levels of treatment at the NTC WWTF. Based on delta oxygen-18 and delta deuterium isotope data, increases in dissolved solids concentrations in water from most wells were consistent with evaporation prior to recharge and mobilization of soluble salts from the unsaturated zone. Arsenic and fluoride concentrations in water from wells decreased between 1993–95 and 2015–19 as the basin filled with treated wastewater, but 2015–19 concentrations generally exceeded the California State Water Resources Control Board maximum contaminant levels of 10 micrograms per liter for arsenic and 2 mg/L for fluoride. Most groundwater in the Irwin groundwater subbasin has unadjusted carbon- 14 ages ranging from 18,400 to 12,350 years before present. However, water from well 10E3, located along the wash near the subbasin outflow in the southeastern part of the Irwin groundwater subbasin, contained measurable tritium, which is consistent with infiltration of intermittent streamflow and groundwater recharge from the wash after 1952. Chemical and isotopic data indicate that treated wastewater is present in water from most wells in the upper aquifer that underlies the Irwin groundwater subbasin. Wells were not sampled to adequately determine the extent of treated wastewater and changes in water quality within the lower aquifer that underlies the Irwin groundwater subbasin.

The U.S. Geological Survey (USGS), in cooperation with the Monterey County Water Resources Agency, conducted studies to help evaluate the surface-water and groundwater resources of the Salinas Valley study area, consisting of the entire Salinas River watershed and several smaller, adjacent coastal watersheds draining into Monterey Bay. The Salinas Valley study area is a highly productive agricultural region that depends on the coordinated use of surface water and groundwater to meet demand for irrigation and public water supply. To continue to meet these demands, a better understanding of the historical water balance and the effects of water-resource development on the long-term sustainability of water resources in the Salinas Valley study area is needed.

The Central Valley of California is one of the most prolific agricultural regions in the world. Agriculture is reliant on the conjunctive use of surface-water and groundwater. The lack of available surface-water and land-use changes have led to pumping-induced groundwater-level and storage declines, land subsidence, changes to streamflow and the environment, and the degradation of water quality. As a result, in part, the Sustainable Groundwater Management Act (SGMA) was developed. An examination of the components of SGMA and contextualizing regional model applications within the SGMA framework was undertaken to better understand and quantify many of the components of SGMA. Specifically, the U.S. Geological Survey (USGS) updated the Central Valley Hydrologic Model (CVHM) to assess hydrologic system responses to climatic variation, surface-water availability, land-use changes, and groundwater pumping. MODFLOW-OWHM has been enhanced to simulate the timing of land subsidence and attribute its inelastic and elastic portions. In addition to extending CVHM through 2019, the new version, CVHM2, includes several enhancements as follows: managed aquifer recharge (MAR), pumping with multi-aquifer wells, inflows from ungauged watersheds, and more detailed water-balance subregions, streamflow network, diversions, tile drains, land use, aquifer properties, and groundwater level and land subsidence observations. Combined with historical approximations, CVHM2 estimates approximately 158 km³ of storage loss in the Central Valley from pre-development to 2019. About 15% of the total storage loss is permanent loss of storage from subsidence that has caused damage to infrastructure. Climate extremes will likely complicate the efforts of water managers to store more water in the ground. CVHM2 can provide data in the form of aggregated input datasets, simulate climatic variations and changes, land-use changes or water management scenarios, and resulting changes in groundwater levels, storage, and land subsidence to assist decision-makers in the conjunctive management of water supplies.

First posted February 10, 2022 Director, California Water Science Center U.S. Geological Survey 6000 J Street, Placer Hall Sacramento, California 95819 Water management in the Santa Ana River watershed in San Bernardino and Riverside Counties in southern California (fig. A1) is complex with various water purveyors navigating geographic, geologic, hydrologic, and political challenges to provide a reliable water supply to stakeholders. As the population has increased throughout southern California, so has the demand for water. The Yucaipa groundwater subbasin (hereafter referred to as “Yucaipa subbasin”), one of nine groundwater subbasins in what the California Department of Water Resources (DWR) refers to as the Upper Santa Ana Valley groundwater basin (California Department of Water Resources, 2016; fig. A1; the DWR naming convention is used within this report), is no exception; steady population growth since the 1940s and changes in water use have forced local water purveyors to regularly adapt their water infrastructure. Water demands within the Yucaipa subbasin have historically been supplied by groundwater, but water imported via the California State Water Project has augmented the total water supply through direct use and through anthropogenic recharge at the Wilson Creek and Oak Glen Creek spreading basins since 2002. Overall demand for groundwater continues to rise, and local water managers are concerned that despite the influx of imported water, groundwater levels may decline to a point where producing water will be uneconomical, severely limiting the ability of local agencies to meet water-supply demand. To better understand the hydrogeology and water resources in the Yucaipa subbasin, the U.S. Geological Survey (USGS) initiated a study in cooperation with the San Bernardino Valley Municipal Water District (SBVMWD) to characterize and model the hydrologic system of the Yucaipa subbasin and the surrounding Yucaipa Valley watershed (YVW; fig. A2). To gain this comprehensive understanding, a three-dimensional (3D) hydrogeologic framework model (HFM; Cromwell and Matti, 2022) was constructed to quantify the structure and extent of hydrogeologic units in the YVW; the hydrologic system was conceptualized and quantified (described in chapter A); and the Yucaipa Integrated Hydrological Model (YIHM; described in chapter B) was developed to simulate the integrated surface-water and aquifer systems, including natural and anthropogenic recharge and discharge throughout the study area during 1947–2014.

This river corridor assessment documents sediment mobility and river response to flood disturbance along a 140-kilometer segment of the main-stem Klamath River below Iron Gate Dam, California. Field and remote sensing methods were used to assess fundamental indicators of active sediment transport and river response to a combination of natural runoff events and reservoir releases during the study period from 2005 to 2019. Discharge measurements at two gaged sites and bed-material samples at two ungaged sites provided direct and indirect evidence of mobile bed conditions, scour and fill, and surface flushing of fine sediment. Available remote-sensing datasets collected in 2005, 2009, 2010, and 2016 were used to determine sediment storage, flood inundation boundaries, and provide indirect evidence of flood-induced scour. These datasets validate channel-maintenance flows defined by Shea and others (2016). During the study period, flows greater than or equal to 6,030 cubic feet per second mobilized the substrate, caused localized scour, and flushed fine sediment from bar surfaces. Flows greater than or equal to 10,400 cubic feet per second stripped vegetation from bars and floodplains and produced deeper scour. Flood disturbance within the study reach is produced by the combined effect of natural flows and reservoir releases, which resulted in mobile bed conditions during the study period. Periodic scour and substrate disturbance are considered by the U.S. Fish and Wildlife Service to be integral for managing disease-induced mortality of juvenile and adult salmonids. Substrate conditions conducive to parasites that host infectious diseases, particularly Ceratonova shasta, occur periodically. Additional studies are required to determine whether disease prevalence can be mitigated by well-timed reservoir releases. Study results are useful for interpreting linkages among physical and biological processes and for evaluating the effectiveness of flow management targeted to improve river bed conditions for endangered salmonid populations.

The abandoned hydraulic mine pit at Malakoff Diggins near Grass Valley, California, can produce large volumes of eroded sediment transportable by storm runoff. Sediment-laden water discharged from the pit is a major source of heavy metals to Humbug Creek and the South Yuba River. To develop a comprehensive sediment budget for the Malakoff Diggins mine pit and identify sources of sediment and metals within the pit that can become entrained as suspended sediment in runoff discharged from the pit, the U.S. Geological Survey, working in cooperation with the California Department of Water Resources, the California Department of Parks and Recreation, and the Nevada Irrigation District, used terrestrial laser scanning technology to quantify eroded volumes and erosion rates of sedimentary units exposed in the pit walls. The results for eroded volumes and rates reported here are part one of a three-part study.High-resolution terrestrial laser scanning surveys were repeated annually from 2014 through 2017, including before and after dry and wet winters, measuring centimeter-scale topographic changes to quantify the volume of sediment eroded from outcrops at Malakoff Diggins State Historic Park, located on the western slope of the northern Sierra Nevada about 17 kilometers northeast of Grass Valley, California. Terrestrial laser scanning enabled construction of three-dimensional maps of the complex outcrop surfaces, which could not be mapped non-destructively or in sufficient detail with traditional surveying techniques. Eroded volumes from discrete sedimentary units were calculated at four study sites (numbered 1, 2, 4, and 5) throughout the mine pit for the December 2014 to August 2017 period.Eroded volumes at the four study sites during the 32-month study ranged from 288 plus or minus (±) 13 cubic meters (m3) of sediment at site 1 to 8,517±145 m3 at site 4. Annual erosion rates at the four study sites ranged from 0.06±0.01 cubic meters per square meter per year (m3/m2/yr) at site 4 to 0.14±0.01 m3/m2/yr at site 2. The total eroded volume documented with terrestrial laser scanning at all four study sites from December 2014 to August 2017 was 12,934±334 m3 of sediment, and the average annual erosion rate for the four study sites was 0.10±0.04 m3/m2/yr.Horizontal erosional-change maps indicate that a variety of erosional processes were responsible for the eroded sediment volume. These included areally broad and smaller-scale processes such as persistent dry ravel, periodic sheet wash, and frost heave and more localized and larger-scale processes such as coalescing fluvial incision, rotational landslides, and translational block-fall failures.

High-resolution, terrestrial laser scanning, also known as ground-based lidar (light detection and ranging), was used to quantify the volume of mercury-contaminated sediment eroded from an outcrop of historical placer-mining debris at the confluence of Humbug Creek and the South Yuba River in the Sierra Nevada foothills, about 17 kilometers northeast of Grass Valley, California, and delivered to a zone below an observed flood stage of the South Yuba River. Substantial quantities of mercury were used and lost to the environment from historical placer gold mining activities on the western slope of the Sierra Nevada, California, and recent studies have documented continued persistence of mercury and methylmercury concentrations in water, sediment, fish, and predatory invertebrates in the Yuba River drainage basin in relation to suspected mercury sources. To identify areas that have high levels of mercury contamination as possible remediation targets in the Yuba River drainage basin and other areas in the Sierra Nevada, the U.S. Geological Survey worked in cooperation with the Bureau of Land Management on this and other detailed studies. Malakoff Diggings, one of the largest hydraulic gold mines in the Sierra Nevada, is 3.5 kilometers north of the study site in the Humbug Creek subbasin.Terrestrial laser scanning was used to produce centimeter-scale, three-dimensional maps of the complex outcrop surface, which was composed of an upper erosional area (cliff and over-steepened slope) and a lower depositional area (colluvial slope). The outcrop could not be mapped non-destructively or in sufficient detail by traditional surveying techniques. The study site, which was approximately 70 meters long, 30 meters wide and 20 meters high, was surveyed four times in 2 years (December 15, 2011; October 25, 2012; January 4, 2013; and November 22, 2013) to determine volumetric differences in the upper erosional and lower depositional areas between surveys. Measured changes in volume for the upper erosional area and lower depositional area were multiplied by the corresponding sediment density so that a mass-balance relationship, between the eroded and deposited sediment during each period, could be used to estimate the amount of mercury-contaminated sediment that was transported to below the base of the colluvial slope, where it could be mobilized by the South Yuba River during a flood having a 5-to-10-year recurrence interval. On December 2, 2012, a flood of this estimated magnitude reached the base of the colluvial slope.Between the first and second surveys (December 15, 2011–October 25, 2012), an estimated mass of 18±9.2 kilograms of sediment was transported from steeper slopes to the gently sloping river bank below the base of the colluvial slope. Between the second and third surveys (October 25, 2012–January 4, 2013), an atmospheric river caused heavy precipitation at the study site during late November and early December 2012. This short-duration, high-intensity rain resulted in a large amount of erosion and deposition at the study site and also caused high streamflow (flood stage) in the South Yuba River. From October 2012 to January 2013, 51±31 kilograms of sediment was transported to below the base of the colluvial slope, that is, below the high-water mark of December 2, 2012. Between the third and fourth surveys (January 4, 2013–November 22, 2013), an additional 10±26 kilograms of sediment was transported to below the base of the colluvial slope. During the 24 months of the study, the total mass of sediment delivered below the base of the colluvial slope and the high-water mark of December 2, 2012, was 79±66 kilograms.In any given year there is a 10–20-percent chance (5-to-10-year recurrence interval) of a flood equal to or greater than that of the December 2, 2012, flood, which could transport mercury-contaminated sediment at the study site into the South Yuba River. Hydraulically modeled estimates of the South Yuba River stage during floods having a 50- and 100-year recurrence interval (2- and 1-percent annual exceedance probability, respectively) indicated that resulting river stages could be 2.2–3.0 meters above the base of the colluvial slope, or 2.2–3.0 meters above the high-water mark of December 2, 2012. Such high river stages would be likely to inundate the lower half of the colluvial slope and mobilize a substantial volume of mercury-contaminated sediment to downstream areas.