Charan Kumar Basuri

This study represents the first investigation of soil ciliate diversity and community structure in the Marche region, Italy, encompassing both natural sites and agro-ecosystems. The main aims were (i) to assess the ability of ciliates to discriminate between different types of land uses, i.e., arable lands and possible farming management practices [organic (ORG) vs. conventional (CON)], and forest (FOR) sites; and (ii) to investigate the relationships among ciliate communities and abiotic parameters at the studied sites. Soil samples were collected twice from 10 sites (5 forest (FOR) (natural soils) and 5 arable lands under different agricultural management systems (3 ORG (minimum tillage) and 2 CON (sod seeding)). Ciliate communities were studied using qualitative (non-flooded Petri dish) and quantitative methods (ciliate counts from permanent slides). Soil chemical–physical (texture, CEC, N, OM, C/N) parameters were also measured. Qualitative ciliate analysis allowed us to identify a total of 59 species representing 33 genera, 20 families, 13 orders, and 7 classes. ORG sites were the richest in species followed by CON and FOR. Multivariate analysis showed statistically significant differences between natural sites (FOR) and agricultural sites, and between ORG and CON management farming systems. CCA analysis revealed a positive correlation between the ciliate species and silt, clay, and pH in ORG sites, and sand, organic carbon, organic matter, total nitrogen, C/N ratio, and CEC (cation exchange capacity) in FOR sites, suggesting the significance of these parameters in shaping the ciliate communities. Altogether, these results showed the bioindicative potential of ciliate communities in discriminating between natural sites (FOR) and arable lands, and their capacity to discriminate, at least preliminarily, between different soil management systems (ORG vs. CON). Furthermore, this study highlights the high diversity of soil ciliates and their response to habitat variability.

Determination of biogeochemical rate constants for Chilika Lake, a tropical brackish water lagoon on the east coast of India

Planktonic ciliate composition and distribution together with physicochemical variables were investigated in a shallow hypersaline lagoon, Pulicat, India, during three seasons, i.e., pre-monsoon (PRM), monsoon (MON), and post-monsoon (POM). The low freshwater inflow, evaporation, and closure of the lake mouth were the main factors for the hypersaline conditions in Pulicat Lake. The average depth and salinity were 1.8 ± 0.12 m (0.8 to 2.8 m) and 35.3 ± 1.68 (12.5 to 61), respectively. A total of 29 ciliate taxa belonging to 18 genera and five classes were identified. Strombidium conicum (24%) was the dominant species followed by Euplotes sp. (10.7%) and Stenosomella sp. (7.02%). Spirotrichea (84%) was the dominant class followed by Oligohymenophorea (9.6%) and Heterotrichea (5.8%). Fabrea salina, a typical species in hypersaline systems, was abundant at locations where the salinity was more than 35. Multivariate analysis using the Bray–Curtis similarity, followed by SIMPROF (Similarity Percentage Analysis), on ciliate abundance data revealed three ciliate assemblages characterizing south, central, and north of the lake at 40% similarity (SIMPROF, cophenetic correlation = 0.622, P = 5%). Both ciliate abundance and chlorophyll-a were positively correlated with salinity. Species richness and evenness were higher in the south sector when compared with those in the other two sectors. Biotic-environmental interaction through canonical correspondence analysis (CCA) inferred that the combined effects of salinity, chlorophyll-a, and nutrient levels are the key factors responsible for the distribution of the ciliate species, suggesting that ciliates can be considered to be potential bioindicators of water quality.

Hamatopeduncularia was erected with Hamatopeduncularis arii as the type species. This genus comprises monogenoidean species mostly found as ectoparasites of marine catfishes belonging to the Ariidae. There is a significant taxonomic ambiguity among Hamatopeduncularia species due to their morphological similarity, but so far only a few morphological studies have succeeded in addressing interspecific variation and relationships. Moreover, little molecular data is available for this genus. A multidisciplinary, integrated study consisting of morphological, morphometric and molecular analyses was conducted on different species of Hamatopeduncularia recovered from the gills of two marine catfishes, Arius jella Day and Plicofollis dussumieri (Valenciennes). Five species of Hamatopeduncularia, two of which represent new species, were investigated: H. arii, H. elongatum, H. thalassini, H. madhaviae sp. nov. and H. bifida sp. nov. Phylogenetic analysis was performed using the 18S rDNA sequence as a molecular marker. The most important results of the present work are: (1) the multidisciplinary description of two novel species; (2) the multidisciplinary redescription of two species and of the type species of the genus; (3) the first molecular characterisation of 18S rDNA sequences of five species of genus Hamatopeduncularia; and (4) molecular support for the monophyly of the genus. http://zoobank.org/urn:lsid:zoobank.org:act:1333F4CC-E497-4D0A-AD7D-276D44AE6413 http://zoobank.org/urn:lsid:zoobank.org:act:43D18F75-6F4A-4F9B-8C00-6234E5BA6526

Symbioses between bacteria and eukaryotes are widespread and may have significant impact on the evolutionary history of symbiotic partners. The order Rickettsiales is a lineage of intracellular Alphaproteobacteria characterized by an obligate association with a wide range of eukaryotic hosts, including several unicellular organisms, such as ciliates and amoebas. In this work, we characterized the Rickettsiales symbionts associated with two different genotypes of the freshwater ciliate Paramecium caudatum originated from freshwater environments in distant geographical areas. Phylogenetic analyses based on 16S rRNA gene showed that the two symbionts are closely related to each other (99.4% identity), belong to the family Rickettsiaceae, but are far-related with respect to previously characterized Rickettsiales. Consequently, they were assigned to a new species of a novel genus, namely “Candidatus Spectririckettsia obscura.” Screening on a database of short reads from 16S rRNA gene amplicon-based profiling studies confirmed that bacterial sequences related to the new symbiont are preferentially retrieved from freshwater environments, apparently with extremely scarce occurrence (< 0.1% positive samples). The present work provides new information on the still under-explored biodiversity of Rickettsiales, in particular those associated to ciliate host cells.