Mathieu Rembauville

Vecteurs écologiques de l'export de carbone et de biominéraux dans l'océan Austral: La biosphère océanique module la concentration de CO2 atmosphérique via la pompe biologique (transfert vertical de carbone organique particulaire - POC - de l'océan de surface vers le fond) et la contre-pompe des carbonates (émission de CO2 lors de la précipitation du carbone inorganique particulaire - PIC). Cette thèse a pour but (1) d'identifier la contribution de différents groupes planctoniques à l'export de POC et PIC à échelle annuelle dans des zones de production contrastée de l'océan Austral et (2) de comprendre comment cette diversité influence la stœchiométrie et la labilité du matériel exporté.Des déploiements de pièges à particules à proximité les iles Kerguelen et de la Géorgie du Sud montrent que la fertilisation naturelle en fer augmente l'intensité mais pas l'efficacité de l'export de POC. Les spores de résistance de diatomées pilotent une fraction importante (40-60 %) de l'export annuel de POC dans chacun des sites productifs. L'analyse taxonomique des diatomées mène à l'identification de groupes consistants qui impactent la séquestration préférentielle du C ou du Si. Lors d'une campagne estivale, nous associons l'abondance relative de diatomées et dinoflagellés à la stœchiométrie N:P de la matière organique et soulignons l'importance des couches de transition pour le découplage des cycles du C et Si. L'étude de la composition en lipides du matériel exporté nous permet d'identifier les spores de diatomées comme des vecteurs de matière organique contenant des acides gras riches en énergie. A Kerguelen, la faible contre-pompe des carbonates est due à dominance des coccolithophoridés dans l'export de PIC au Sud du Front Polaire.

The Southern Ocean hosts a large diversity of diatoms that play a major role in carbon fluxes. How the seasonal dynamics in the abundance of specific taxa in surface waters are linked to their contribution to carbon export remains, however, poorly understood. We present here synchronized observations from autonomous samplers deployed in the mixed layer (42 m) and at depth (300 m) during an entire productive season (October 2016 to March 2017) in the iron fertilized region of the central plateau of Kerguelen. Microscopic observations of surface water collected every 11 d revealed 30 different diatom taxa, each contributing to > 1% of total carbon biomass throughout the season. The synchronized sampling revealed a common pattern for diatom taxa belonging to 12 different genera, consisting, for a given taxon, in short pulses of abundance in surface waters followed by export. We explain these coupled dynamics by the formation of aggregates that are produced when a critical diatom cell abundance is reached. This control of the maximum abundance of a given diatom drives the seasonal change in the slope of the size‐class distribution of the diatom community. It further constrains the total carbon diatom biomass in a narrow range of values due to the inverse relationship between total diatom abundance and their community‐weighted mean biomass. This coupling let us conclude that aggregate formation, and the export to depth, occurs throughout the season for diatoms with different morphologies.

The Southern Ocean (SO) hosts plankton communities that impact the biogeochemical cycles of the global ocean. However, weather conditions in the SO restrict mainly in situ observations of plankton communities to spring and summer, preventing the description of biological successions at an annual scale. Here, we use shipboard observations collected in the Indian sector of the SO to develop a multivariate relationship between physical and bio‐optical data, and, the composition and carbon content of the plankton community. Then we apply this multivariate relationship to five biogeochemical Argo (BGC‐Argo) floats deployed within the same bio‐geographical zone as the ship‐board observations to describe spatial and seasonal changes in plankton assemblage. The floats reveal a high contribution of bacteria below the mixed layer, an overall low abundance of picoplankton and a seasonal succession from nano‐ to microplankton during the spring bloom. Both naturally iron‐fertilized waters downstream of the Crozet and Kerguelen Plateaus show elevated phytoplankton biomass in spring and summer but they differ by a nano‐ or microplankton dominance at Crozet and Kerguelen, respectively. The estimated plankton group successions appear consistent with independent estimations of particle diameter based on the optical signals. Furthermore, the comparison of the plankton community composition in the surface layer with the presence of large mesopelagic particles diagnosed by spikes of optical signals provides insight into the nature and temporal changes of ecological vectors that drive particle export. This study emphasizes the power of BGC‐Argo floats for investigating important biogeochemical processes at high temporal and spatial resolution.