Basari Basari
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Basari Basari has a total of 131 co-authors. Here are the top co-authors by number of shared publications:
Eko Tjipto Rahardjo
Antenna, Microwave and Propagation Research Group(AMRG), Department of Electrical Engineering, Universitas Indonesia, Depok 16424, Indonesia
6 shared publicationsFitri Yuli Zulkifli
Antenna, Microwave and Propagation Research Group(AMRG), Department of Electrical Engineering, Universitas Indonesia, Depok 16424, Indonesia
6 shared publicationsAgus Santoso Tamsir
Electrical Department, Engineering faculty, Universitas Indonesia, Depok, Jawa Barat, Indonesia, 16424
4 shared publicationsDadang Gunawan
Electrical Department, Engineering faculty, Universitas Indonesia, Depok, Jawa Barat, Indonesia, 16424
4 shared publications- Eko Tjipto Rahardjo
Universitas Indonesia
3 shared publications - Fitri Yuli Zulkifli
Department of Electrical Engineering, Universitas Indonesia, Depok, Indonesia
3 shared publications
Latest Publications
- Open Access
Effects of EEG Preprocessing on Channel-Wise Attention and Effective Connectivity Alignment in Visual EEG Decoding
Transformer-based deep learning models have shown great potential for decoding visual EEG signals. However, their internal attention mechanisms are often evaluated primarily on optimization objectives, leaving their alignment with biological brain connectivity an open question. This study empirically evaluates how variations in EEG preprocessing strategies affect these attention representations using the Adaptive Thinking Mapper (ATM) model as a framework. We compared a baseline pipeline (MVNN only) against a comprehensive cleaning pipeline integrating ICA and notch filtering. The models were evaluated through cross-generalization, noise robustness, and spectral-temporal ablation analyses. Furthermore, we investigated the structural correspondence between the model’s data-driven attention weights and neurophysiological reference networks (GPDC, PDC, and DTF) using Node Strength Correlation and Representational Similarity Analysis (RSA). The results show that the comprehensive preprocessing successfully suppresses non-neural artifacts, such as frontal noise and electrical interference, while maintaining comparable decoding accuracy and baseline robustness. Alignment analyses revealed that the broad spatial organization of the learned attention patterns remains highly stable across pipelines, capturing key directed connectivity dynamics with subtle, metricdependent variations in global representational geometry. This work provides an empirical exploration into bridging data-driven attention weights with neurophysiological consistency, offering insights toward more transparent brain-computer interfaces.
Open AccessEffects of EEG Preprocessing on Channel-Wise Attention and Effective Connectivity Alignment in Visual EEG Decoding
Transformer-based deep learning models have shown great potential for decoding visual EEG signals. However, their internal attention mechanisms are often evaluated primarily on optimization objectives, leaving their alignment with biological brain connectivity an open question. This study empirically evaluates how variations in EEG preprocessing strategies affect these attention representations using the Adaptive Thinking Mapper (ATM) model as a framework. We compared a baseline pipeline (MVNN only) against a comprehensive cleaning pipeline integrating ICA and notch filtering. The models were evaluated through cross-generalization, noise robustness, and spectral-temporal ablation analyses. Furthermore, we investigated the structural correspondence between the model’s data-driven attention weights and neurophysiological reference networks (GPDC, PDC, and DTF) using Node Strength Correlation and Representational Similarity Analysis (RSA). The results show that the comprehensive preprocessing successfully suppresses non-neural artifacts, such as frontal noise and electrical interference, while maintaining comparable decoding accuracy and baseline robustness. Alignment analyses revealed that the broad spatial organization of the learned attention patterns remains highly stable across pipelines, capturing key directed connectivity dynamics with subtle, metricdependent variations in global representational geometry. This work provides an empirical exploration into bridging data-driven attention weights with neurophysiological consistency, offering insights toward more transparent brain-computer interfaces.
- Open Access
- 15 June 2026
- Published by Elsevier in SSRN Electronic Journal
A Portable, Low-Cost, and Open-Source Electrical Impedance Tomography System with a Modular Analog Front-End Based on STM32 and AD5933
Electrical impedance tomography (EIT) is a non-invasive, and radiation-free medical imaging technique. However, the high cost and complexity of commercial devices limit their widespread accessibility. This paper presents a portable, low-cost (< $100), open-source 16-electrode EIT hardware based on the AD5933 impedance converter and an STM32F407VGT6 microcontroller. Its highly modular analog front-end allows users to conveniently select between Load-in-the-Loop or Mirrored Howland Voltage-Controlled Current Source (VCCS) topologies, and AD620 or INA118P instrumentation amplifiers. Leveraging the STM32's computational efficiency, the system employs an adjacent pattern to rapidly acquire 208 independent boundary voltage measurements in 4 seconds per frame. Hardware validation demonstrated excellent signal stability, yielding an average Signal-to-Noise Ratio (SNR) of 35.8 dB and measurement repeatability less than 0.65 [[EQUATION]]. Experimental tests were conducted using a custom 3D-printed saline phantom containing non-conductive anomalies. The collected data were successfully reconstructed into 2D images utilizing the Python-based pyEIT framework, achieving a high Structural Similarity Index Measure (SSIM) of 0.92. Relying on free, open-source applications across the software, this easily replicable system provides a robust, versatile platform for EIT research and education.
- 15 June 2026
- Published by Elsevier in SSRN Electronic Journal
Open AccessA Portable, Low-Cost, and Open-Source Electrical Impedance Tomography System with a Modular Analog Front-End Based on STM32 and AD5933
Electrical impedance tomography (EIT) is a non-invasive, and radiation-free medical imaging technique. However, the high cost and complexity of commercial devices limit their widespread accessibility. This paper presents a portable, low-cost (< $100), open-source 16-electrode EIT hardware based on the AD5933 impedance converter and an STM32F407VGT6 microcontroller. Its highly modular analog front-end allows users to conveniently select between Load-in-the-Loop or Mirrored Howland Voltage-Controlled Current Source (VCCS) topologies, and AD620 or INA118P instrumentation amplifiers. Leveraging the STM32's computational efficiency, the system employs an adjacent pattern to rapidly acquire 208 independent boundary voltage measurements in 4 seconds per frame. Hardware validation demonstrated excellent signal stability, yielding an average Signal-to-Noise Ratio (SNR) of 35.8 dB and measurement repeatability less than 0.65 [[EQUATION]]. Experimental tests were conducted using a custom 3D-printed saline phantom containing non-conductive anomalies. The collected data were successfully reconstructed into 2D images utilizing the Python-based pyEIT framework, achieving a high Structural Similarity Index Measure (SSIM) of 0.92. Relying on free, open-source applications across the software, this easily replicable system provides a robust, versatile platform for EIT research and education.
- Open Access
- 15 June 2026
- Published by Elsevier in SSRN Electronic Journal
A Portable, Low-Cost, and Open-Source Electrical Impedance Tomography System with a Modular Analog Front-End Based on STM32 and AD5933
Electrical impedance tomography (EIT) is a non-invasive, and radiation-free medical imaging technique. However, the high cost and complexity of commercial devices limit their widespread accessibility. This paper presents a portable, low-cost (< $100), open-source 16-electrode EIT hardware based on the AD5933 impedance converter and an STM32F407VGT6 microcontroller. Its highly modular analog front-end allows users to conveniently select between Load-in-the-Loop or Mirrored Howland Voltage-Controlled Current Source (VCCS) topologies, and AD620 or INA118P instrumentation amplifiers. Leveraging the STM32's computational efficiency, the system employs an adjacent pattern to rapidly acquire 208 independent boundary voltage measurements in 4 seconds per frame. Hardware validation demonstrated excellent signal stability, yielding an average Signal-to-Noise Ratio (SNR) of 35.8 dB and measurement repeatability less than 0.65 [[EQUATION]]. Experimental tests were conducted using a custom 3D-printed saline phantom containing non-conductive anomalies. The collected data were successfully reconstructed into 2D images utilizing the Python-based pyEIT framework, achieving a high Structural Similarity Index Measure (SSIM) of 0.92. Relying on free, open-source applications across the software, this easily replicable system provides a robust, versatile platform for EIT research and education.
- 15 June 2026
- Published by Elsevier in SSRN Electronic Journal
Open AccessA Portable, Low-Cost, and Open-Source Electrical Impedance Tomography System with a Modular Analog Front-End Based on STM32 and AD5933
Electrical impedance tomography (EIT) is a non-invasive, and radiation-free medical imaging technique. However, the high cost and complexity of commercial devices limit their widespread accessibility. This paper presents a portable, low-cost (< $100), open-source 16-electrode EIT hardware based on the AD5933 impedance converter and an STM32F407VGT6 microcontroller. Its highly modular analog front-end allows users to conveniently select between Load-in-the-Loop or Mirrored Howland Voltage-Controlled Current Source (VCCS) topologies, and AD620 or INA118P instrumentation amplifiers. Leveraging the STM32's computational efficiency, the system employs an adjacent pattern to rapidly acquire 208 independent boundary voltage measurements in 4 seconds per frame. Hardware validation demonstrated excellent signal stability, yielding an average Signal-to-Noise Ratio (SNR) of 35.8 dB and measurement repeatability less than 0.65 [[EQUATION]]. Experimental tests were conducted using a custom 3D-printed saline phantom containing non-conductive anomalies. The collected data were successfully reconstructed into 2D images utilizing the Python-based pyEIT framework, achieving a high Structural Similarity Index Measure (SSIM) of 0.92. Relying on free, open-source applications across the software, this easily replicable system provides a robust, versatile platform for EIT research and education.
- Open Access
- 15 January 2024
- Published by MDPI AG in Journal of Imaging
- Vol. 10 (1) , 22
Decomposition Technique for Bio-Transmittance Imaging Based on Attenuation Coefficient Matrix Inverse
Human body tissue disease diagnosis will become more accurate if transmittance images, such as X-ray images, are separated according to each constituent tissue. This research proposes a new image decomposition technique based on the matrix inverse method for biological tissue images. The fundamental idea of this research is based on the fact that when k different monochromatic lights penetrate a biological tissue, they will experience different attenuation coefficients. Furthermore, the same happens when monochromatic light penetrates k different biological tissues, as they will also experience different attenuation coefficients. The various attenuation coefficients are arranged into a unique -dimensional square matrix. -many images taken by -many different monochromatic lights are then merged into an image vector entity; further, a matrix inverse operation is performed on the merged image, producing N-many tissue thickness images of the constituent tissues. This research demonstrates that the proposed method effectively decomposes images of biological objects into separate images, each showing the thickness distributions of different constituent tissues. In the future, this proposed new technique is expected to contribute to supporting medical imaging analysis.- 15 January 2024
- Published by MDPI AG in Journal of Imaging
- Vol. 10 (1) , 22
Open AccessDecomposition Technique for Bio-Transmittance Imaging Based on Attenuation Coefficient Matrix Inverse
Human body tissue disease diagnosis will become more accurate if transmittance images, such as X-ray images, are separated according to each constituent tissue. This research proposes a new image decomposition technique based on the matrix inverse method for biological tissue images. The fundamental idea of this research is based on the fact that when k different monochromatic lights penetrate a biological tissue, they will experience different attenuation coefficients. Furthermore, the same happens when monochromatic light penetrates k different biological tissues, as they will also experience different attenuation coefficients. The various attenuation coefficients are arranged into a unique -dimensional square matrix. -many images taken by -many different monochromatic lights are then merged into an image vector entity; further, a matrix inverse operation is performed on the merged image, producing N-many tissue thickness images of the constituent tissues. This research demonstrates that the proposed method effectively decomposes images of biological objects into separate images, each showing the thickness distributions of different constituent tissues. In the future, this proposed new technique is expected to contribute to supporting medical imaging analysis. - Open Access
Hybrid Feature Extractor Using Discrete Wavelet Transform and Histogram of Oriented Gradient on Convolutional-Neural-Network-Based Palm Vein Recognition
Biometric recognition techniques have become more developed recently, especially in security and attendance systems. Biometrics are features attached to the human body that are considered safer and more reliable since they are difficult to imitate or lose. One of the popular biometrics considered in research is palm veins. They are an intrinsic biometric located under the human skin, so they have several advantages when developing verification systems. However, palm vein images obtained based on infrared spectra have several disadvantages, such as nonuniform illumination and low contrast. This study, based on a convolutional neural network (CNN), was conducted on five public datasets from CASIA, Vera, Tongji, PolyU, and PUT, with three parameters: accuracy, AUC, and EER. Our proposed VeinCNN recognition method, called verification scheme with VeinCNN, uses hybrid feature extraction from a discrete wavelet transform (DWT) and histogram of oriented gradient (HOG). It shows promising results in terms of accuracy, AUC, and EER values, especially in the total parameter values. The best result was obtained for the CASIA dataset with 99.85% accuracy, 99.80% AUC, and 0.0083 EER.
Open AccessHybrid Feature Extractor Using Discrete Wavelet Transform and Histogram of Oriented Gradient on Convolutional-Neural-Network-Based Palm Vein Recognition
Biometric recognition techniques have become more developed recently, especially in security and attendance systems. Biometrics are features attached to the human body that are considered safer and more reliable since they are difficult to imitate or lose. One of the popular biometrics considered in research is palm veins. They are an intrinsic biometric located under the human skin, so they have several advantages when developing verification systems. However, palm vein images obtained based on infrared spectra have several disadvantages, such as nonuniform illumination and low contrast. This study, based on a convolutional neural network (CNN), was conducted on five public datasets from CASIA, Vera, Tongji, PolyU, and PUT, with three parameters: accuracy, AUC, and EER. Our proposed VeinCNN recognition method, called verification scheme with VeinCNN, uses hybrid feature extraction from a discrete wavelet transform (DWT) and histogram of oriented gradient (HOG). It shows promising results in terms of accuracy, AUC, and EER values, especially in the total parameter values. The best result was obtained for the CASIA dataset with 99.85% accuracy, 99.80% AUC, and 0.0083 EER.
- 1 January 2024
- Published by AIP Publishing in AIP Conference Proceedings
- Vol. 3219 (1) , 080012
Design of wearable textile antenna for military application
A wearable textile antenna is proposed using felt as substrate and copper tape as conductor material at 2.4 GHz for military application. The overall dimension A wearable textile antenna is proposed using felt as substrate and copper tape as conductor material at 2.4 GHz for military application. The overall dimension
- 1 January 2024
- Published by AIP Publishing in AIP Conference Proceedings
- Vol. 3219 (1) , 080012
Design of wearable textile antenna for military application
A wearable textile antenna is proposed using felt as substrate and copper tape as conductor material at 2.4 GHz for military application. The overall dimension A wearable textile antenna is proposed using felt as substrate and copper tape as conductor material at 2.4 GHz for military application. The overall dimension
- 1 January 2024
- Published by AIP Publishing in AIP Conference Proceedings
- Vol. 3080 (1)
Extraction of collagen and hydroxyapatite from fish for bone scaffold: A review
Bones constitute a crucial element of human anatomy. The growing prevalence of bone disorders and diseases, such as fractures caused by osteoporosis, is a matte
- 1 January 2024
- Published by AIP Publishing in AIP Conference Proceedings
- Vol. 3080 (1)
Extraction of collagen and hydroxyapatite from fish for bone scaffold: A review
Bones constitute a crucial element of human anatomy. The growing prevalence of bone disorders and diseases, such as fractures caused by osteoporosis, is a matte
- Open Access
- 5 August 2022
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Access
- Vol. 10, 88621-88631
Optimizing CNN Hyperparameters for Blastocyst Quality Assessment in Small Datasets
Morphological assessment of blastocyst quality is one of the most significant challenges in the IVF process because the current assessment is based on evaluation by an embryologist; thus, it is still manual and subjective and lacks precision. Artificial intelligence (AI) plays a role in overcoming the limitations of the manual assessment system, and its use is expected to increase implantation rates in IVF. This study aims to optimize the convolutional neural network (CNN) model using the grid search method and to evaluate the effectiveness of different machine learning models in classifying the blastocyst quality in a small dataset. The reliability of the proposed model will be compared with that of other machine learning methods, such as logistic regression (LR), support vector machine (SVM), k-nearest neighbors (KNN), the boosting algorithm, and with the addition of the Canny operator as a segmentation process and principal component analysis (PCA) as a feature extraction approach. We evaluated the results using various performance measures, such as the precision, recall, F1-measure, accuracy, and area under the curve of the receiver operating characteristic curve (AUC-ROC). The final results showed that our proposed CNN model achieves a validation accuracy of 84.00%, a test accuracy of 83.33%, and an AUC of 0.844. McNemar’s statistical test results support that our CNN model outperforms the other classifiers.
- 5 August 2022
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Access
- Vol. 10, 88621-88631
Open AccessOptimizing CNN Hyperparameters for Blastocyst Quality Assessment in Small Datasets
Morphological assessment of blastocyst quality is one of the most significant challenges in the IVF process because the current assessment is based on evaluation by an embryologist; thus, it is still manual and subjective and lacks precision. Artificial intelligence (AI) plays a role in overcoming the limitations of the manual assessment system, and its use is expected to increase implantation rates in IVF. This study aims to optimize the convolutional neural network (CNN) model using the grid search method and to evaluate the effectiveness of different machine learning models in classifying the blastocyst quality in a small dataset. The reliability of the proposed model will be compared with that of other machine learning methods, such as logistic regression (LR), support vector machine (SVM), k-nearest neighbors (KNN), the boosting algorithm, and with the addition of the Canny operator as a segmentation process and principal component analysis (PCA) as a feature extraction approach. We evaluated the results using various performance measures, such as the precision, recall, F1-measure, accuracy, and area under the curve of the receiver operating characteristic curve (AUC-ROC). The final results showed that our proposed CNN model achieves a validation accuracy of 84.00%, a test accuracy of 83.33%, and an AUC of 0.844. McNemar’s statistical test results support that our CNN model outperforms the other classifiers.