Chi-Yuan Chang
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Chi-Yuan Chang has a total of 17 co-authors. Here are the top co-authors by number of shared publications:
- Daniel M. Goldenholz
Harvard Medical School Boston Massachusetts USA
3 shared publications - Tzyy-Ping Jung
University of California San Diego
3 shared publications - Michael Brandon Westover
Harvard Medical School Boston Massachusetts USA
2 shared publications - Robert Moss
Seizure Tracker Springfield Virginia USA
2 shared publications - Bo-Yu Tsai
Institute of Biomedical Engineering and the Brain Research Center, National Yang Ming Chiao Tung University, Hsinchu, Taiwan
1 shared publication Hsiang-Jen Wang
Department of Computer Science, National Yang Ming Chiao Tung University, Hsinchu, Taiwan
1 shared publication
Latest Publications
- 5 January 2026
- Published by Wiley in Annals of Neurology
- Vol. 99 (4) , 1076-1082
Does Missing Medication Acutely Change Seizure Risk? A Prospective Study
Objective: The objective of this study was to determine whether missing individual doses of anti‐seizure medications (ASMs) elevate short‐term seizure risk in people with drug‐resistant epilepsy. Methods: In a prospective, community‐based cohort, adults with drug‐resistant epilepsy (≥ 3 seizures/month) or their caregivers recorded seizures and ASM intake with smartphone applications for 10 months each. Individual level analysis modeled the relationships between ASM adherence with seizure occurrence, as well as with a simplified seizure forecast via a 90‐day moving average (“Napkin method”). Group‐level analysis with a mixed‐effects model was performed to examine the relationship between ASM adherence and simplified forecasts, while controlling for differences in individual seizure frequency via random effects. Results: Twenty‐seven participants (median age = 29 years) contributed 7,853 person‐days. Individual analysis showed that only a small (n = 2) number of participants had a weak relationship between ASM adherence with seizure occurrence. Group‐level analysis showed that seizure occurrence was highly linked to the Napkin method, but not ASM adherence. Interpretation: Among individuals with frequent, drug‐resistant epilepsy, occasional missed ASM doses did not measurably raise immediate seizure risk. Whereas sustained nonadherence remains a clinical concern, clinicians may reassure patients that infrequent brief lapses are unlikely to trigger seizures acutely, yet they should continue emphasizing overall adherence for long‐term seizure control. ANN NEUROL 2026;99:1076–1082
- 5 January 2026
- Published by Wiley in Annals of Neurology
- Vol. 99 (4) , 1076-1082
Does Missing Medication Acutely Change Seizure Risk? A Prospective Study
Objective: The objective of this study was to determine whether missing individual doses of anti‐seizure medications (ASMs) elevate short‐term seizure risk in people with drug‐resistant epilepsy. Methods: In a prospective, community‐based cohort, adults with drug‐resistant epilepsy (≥ 3 seizures/month) or their caregivers recorded seizures and ASM intake with smartphone applications for 10 months each. Individual level analysis modeled the relationships between ASM adherence with seizure occurrence, as well as with a simplified seizure forecast via a 90‐day moving average (“Napkin method”). Group‐level analysis with a mixed‐effects model was performed to examine the relationship between ASM adherence and simplified forecasts, while controlling for differences in individual seizure frequency via random effects. Results: Twenty‐seven participants (median age = 29 years) contributed 7,853 person‐days. Individual analysis showed that only a small (n = 2) number of participants had a weak relationship between ASM adherence with seizure occurrence. Group‐level analysis showed that seizure occurrence was highly linked to the Napkin method, but not ASM adherence. Interpretation: Among individuals with frequent, drug‐resistant epilepsy, occasional missed ASM doses did not measurably raise immediate seizure risk. Whereas sustained nonadherence remains a clinical concern, clinicians may reassure patients that infrequent brief lapses are unlikely to trigger seizures acutely, yet they should continue emphasizing overall adherence for long‐term seizure control. ANN NEUROL 2026;99:1076–1082
Rigorous evaluation of five models for e‐diary‐only seizure forecasting: Retrospective and prospective datasets do not outperform the Napkin method
Objective: Seizure forecasting using e‐diaries may help patients with seizures to organize their daily life. Until now, most methods were not rigorously tested against a strict standard. This study aims to assess whether the performance of various models for seizure forecasting using e‐diaries is better than the performance of a moving window average (a.k.a. the Napkin method, due to simplicity of calculation). Methods: We analyzed three cohorts from Seizure Tracker: a retrospective study and two prospective studies. E‐diaries and the type of seizures were extracted from the datasets. We implemented five machine learning models (Perceptron, 1D‐convolution, Multilayer Perceptron, Cycle, point‐process generalized linear model) and compared their performance at seizure forecasting against the Napkin forecast. The models predicted the probability of having at least one seizure in the next 24‐h period based on a 90‐day historical window. Model performances were evaluated by commonly used metrics (area under the precision–recall curve, area under the receiver operating characteristic curve, and Brier score). We considered a model to be clinically ineffective if it did not outperform the Napkin method across metrics and seizure frequencies. Results: A total of 5501 retrospective patients (3300 training, 1100 validation, and 1101 testing) and 36 prospective patients (21 from one cohort, 15 from the other) were included in the analysis. No model achieved significantly better performance than the Napkin method across metrics and frequencies. Significance: Clinically effective seizure forecasting (i.e., beyond the Napkin method) for 24‐h risk using e‐diaries alone may be infeasible with currently available techniques.
Rigorous evaluation of five models for e‐diary‐only seizure forecasting: Retrospective and prospective datasets do not outperform the Napkin method
Objective: Seizure forecasting using e‐diaries may help patients with seizures to organize their daily life. Until now, most methods were not rigorously tested against a strict standard. This study aims to assess whether the performance of various models for seizure forecasting using e‐diaries is better than the performance of a moving window average (a.k.a. the Napkin method, due to simplicity of calculation). Methods: We analyzed three cohorts from Seizure Tracker: a retrospective study and two prospective studies. E‐diaries and the type of seizures were extracted from the datasets. We implemented five machine learning models (Perceptron, 1D‐convolution, Multilayer Perceptron, Cycle, point‐process generalized linear model) and compared their performance at seizure forecasting against the Napkin forecast. The models predicted the probability of having at least one seizure in the next 24‐h period based on a 90‐day historical window. Model performances were evaluated by commonly used metrics (area under the precision–recall curve, area under the receiver operating characteristic curve, and Brier score). We considered a model to be clinically ineffective if it did not outperform the Napkin method across metrics and seizure frequencies. Results: A total of 5501 retrospective patients (3300 training, 1100 validation, and 1101 testing) and 36 prospective patients (21 from one cohort, 15 from the other) were included in the analysis. No model achieved significantly better performance than the Napkin method across metrics and frequencies. Significance: Clinically effective seizure forecasting (i.e., beyond the Napkin method) for 24‐h risk using e‐diaries alone may be infeasible with currently available techniques.
- 17 June 2022
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Neural Networks and Learning Systems
- Vol. 35 (1) , 348-361
Development of an Adaptive Artifact Subspace Reconstruction Based on Hebbian/Anti-Hebbian Learning Networks for Enhancing BCI Performance
Brain–computer interface (BCI) actively translates the brain signals into executable actions by establishing direct communication between the human brain and external devices. Recording brain activity through electroencephalography (EEG) is generally contaminated with both physiological and nonphysiological artifacts, which significantly hinders the BCI performance. Artifact subspace reconstruction (ASR) is a well-known statistical technique that automatically removes artifact components by determining the rejection threshold based on the initial reference EEG segment in multichannel EEG recordings. In real-world applications, the fixed threshold may limit the efficacy of the artifact correction, especially when the quality of the reference data is poor. This study proposes an adaptive online ASR technique by integrating the Hebbian/anti-Hebbian neural networks into the ASR algorithm, namely, principle subspace projection ASR (PSP-ASR) and principal subspace whitening ASR (PSW-ASR) that segmentwise self-organize the artifact subspace by updating the synaptic weights according to the Hebbian and anti-Hebbian learning rules. The effectiveness of the proposed algorithm is compared to the conventional ASR approaches on benchmark EEG dataset and three BCI frameworks, including steady-state visual evoked potential (SSVEP), rapid serial visual presentation (RSVP), and motor imagery (MI) by evaluating the root-mean-square error (RMSE), the signal-to-noise ratio (SNR), the Pearson correlation, and classification accuracy. The results demonstrated that the PSW-ASR algorithm effectively removed the EEG artifacts and retained the activity-specific brain signals compared to the PSP-ASR, standard ASR (Init-ASR), and moving-window ASR (MW-ASR) methods, thereby enhancing the SSVEP, RSVP, and MI BCI performances. Finally, our empirical results from the PSW-ASR algorithm suggested the choice of an aggressive cutoff range of${c =}$ 1–10 for activity-specific BCI applications and a moderate range of${c > }10$ for the benchmark dataset and general BCI applications.- 17 June 2022
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Neural Networks and Learning Systems
- Vol. 35 (1) , 348-361
Development of an Adaptive Artifact Subspace Reconstruction Based on Hebbian/Anti-Hebbian Learning Networks for Enhancing BCI Performance
Brain–computer interface (BCI) actively translates the brain signals into executable actions by establishing direct communication between the human brain and external devices. Recording brain activity through electroencephalography (EEG) is generally contaminated with both physiological and nonphysiological artifacts, which significantly hinders the BCI performance. Artifact subspace reconstruction (ASR) is a well-known statistical technique that automatically removes artifact components by determining the rejection threshold based on the initial reference EEG segment in multichannel EEG recordings. In real-world applications, the fixed threshold may limit the efficacy of the artifact correction, especially when the quality of the reference data is poor. This study proposes an adaptive online ASR technique by integrating the Hebbian/anti-Hebbian neural networks into the ASR algorithm, namely, principle subspace projection ASR (PSP-ASR) and principal subspace whitening ASR (PSW-ASR) that segmentwise self-organize the artifact subspace by updating the synaptic weights according to the Hebbian and anti-Hebbian learning rules. The effectiveness of the proposed algorithm is compared to the conventional ASR approaches on benchmark EEG dataset and three BCI frameworks, including steady-state visual evoked potential (SSVEP), rapid serial visual presentation (RSVP), and motor imagery (MI) by evaluating the root-mean-square error (RMSE), the signal-to-noise ratio (SNR), the Pearson correlation, and classification accuracy. The results demonstrated that the PSW-ASR algorithm effectively removed the EEG artifacts and retained the activity-specific brain signals compared to the PSP-ASR, standard ASR (Init-ASR), and moving-window ASR (MW-ASR) methods, thereby enhancing the SSVEP, RSVP, and MI BCI performances. Finally, our empirical results from the PSW-ASR algorithm suggested the choice of an aggressive cutoff range of${c =}$ 1–10 for activity-specific BCI applications and a moderate range of${c > }10$ for the benchmark dataset and general BCI applications.- 1 November 2021
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Circuits and Systems II: Express Briefs
- Vol. 68 (12) , 3493-3497
Hardware-Oriented Memory-Limited Online Artifact Subspace Reconstruction (HMO-ASR) Algorithm
Artifact Subspace Reconstruction (ASR) is a machine learning technique widely used to remove non-brain signals (referred to as “artifacts”) from electroencephalograms (EEGs). The ASR algorithm can, however, be constrained by the limited memory available on portable devices. To address this challenge, we propose a Hardware-Oriented Memory-Limited Online ASR (HMO-ASR) algorithm. The proposed HMO-ASR algorithm consists of (1) two-level window-based preprocessing including PCA-based and z-score-based preprocessing to clean the data in each window, (2) iterative mean, standard deviation, and covariance update using a parallel algorithm to achieve window-based processing, and (3) early eigenvector matrix determination to save the computation. With the three schemes, the HMO-ASR method can be implemented on mobile devices, application-specific integrated circuits (ASICs) or field programmable gate arrays (FPGAs) with limited memory. The study results showed that the proposed HMO-ASR algorithm can achieve comparable performance to those obtained by the offline ASR algorithm with a 98.64% reduction in memory size. An FPGA implementation is used for silicon proof of the proposed HMO-ASR algorithm.
- 1 November 2021
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Circuits and Systems II: Express Briefs
- Vol. 68 (12) , 3493-3497
Hardware-Oriented Memory-Limited Online Artifact Subspace Reconstruction (HMO-ASR) Algorithm
Artifact Subspace Reconstruction (ASR) is a machine learning technique widely used to remove non-brain signals (referred to as “artifacts”) from electroencephalograms (EEGs). The ASR algorithm can, however, be constrained by the limited memory available on portable devices. To address this challenge, we propose a Hardware-Oriented Memory-Limited Online ASR (HMO-ASR) algorithm. The proposed HMO-ASR algorithm consists of (1) two-level window-based preprocessing including PCA-based and z-score-based preprocessing to clean the data in each window, (2) iterative mean, standard deviation, and covariance update using a parallel algorithm to achieve window-based processing, and (3) early eigenvector matrix determination to save the computation. With the three schemes, the HMO-ASR method can be implemented on mobile devices, application-specific integrated circuits (ASICs) or field programmable gate arrays (FPGAs) with limited memory. The study results showed that the proposed HMO-ASR algorithm can achieve comparable performance to those obtained by the offline ASR algorithm with a 98.64% reduction in memory size. An FPGA implementation is used for silicon proof of the proposed HMO-ASR algorithm.
- Top Cited Papers
- 22 July 2019
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Biomedical Engineering
- Vol. 67 (4) , 1114-1121
Evaluation of Artifact Subspace Reconstruction for Automatic Artifact Components Removal in Multi-Channel EEG Recordings
Objective: Artifact subspace reconstruction (ASR) is an automatic, online-capable, component-based method that can effectively remove transient or large-amplitude artifacts contaminating electroencephalographic (EEG) data. However, the effectiveness of ASR and the optimal choice of its parameter have not been systematically evaluated and reported, especially on actual EEG data. Methods: This study systematically evaluates ASR on twenty EEG recordings taken during simulated driving experiments. Independent component analysis (ICA) and an independent component classifier are applied to separate artifacts from brain signals to quantitatively assess the effectiveness of the ASR. Results: ASR removes more eye and muscle components than brain components. Moreover, even though some eye and muscle components retain after ASR cleaning, the power of their activities are reduced. Study results also showed that ASR cleaning improved the quality of a subsequent ICA decomposition. Conclusions: Empirical results show that the optimal ASR parameter is between 20 and 30, balancing between removing non-brain signals and retaining brain activities. Significance: With an appropriate choice of parameter, ASR can be a powerful and automatic artifact removal approach for offline data analysis or online real-time EEG applications such as clinical monitoring and brain-computer interfaces.
- 22 July 2019
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Biomedical Engineering
- Vol. 67 (4) , 1114-1121
Top Cited PapersEvaluation of Artifact Subspace Reconstruction for Automatic Artifact Components Removal in Multi-Channel EEG Recordings
Objective: Artifact subspace reconstruction (ASR) is an automatic, online-capable, component-based method that can effectively remove transient or large-amplitude artifacts contaminating electroencephalographic (EEG) data. However, the effectiveness of ASR and the optimal choice of its parameter have not been systematically evaluated and reported, especially on actual EEG data. Methods: This study systematically evaluates ASR on twenty EEG recordings taken during simulated driving experiments. Independent component analysis (ICA) and an independent component classifier are applied to separate artifacts from brain signals to quantitatively assess the effectiveness of the ASR. Results: ASR removes more eye and muscle components than brain components. Moreover, even though some eye and muscle components retain after ASR cleaning, the power of their activities are reduced. Study results also showed that ASR cleaning improved the quality of a subsequent ICA decomposition. Conclusions: Empirical results show that the optimal ASR parameter is between 20 and 30, balancing between removing non-brain signals and retaining brain activities. Significance: With an appropriate choice of parameter, ASR can be a powerful and automatic artifact removal approach for offline data analysis or online real-time EEG applications such as clinical monitoring and brain-computer interfaces.
- 4 December 2002
- Published by Institute of Electrical and Electronics Engineers (IEEE)
- Vol. i, 908-912
Multiresolution stereo-a Bayesian approach
- 4 December 2002
- Published by Institute of Electrical and Electronics Engineers (IEEE)
- Vol. i, 908-912
Multiresolution stereo-a Bayesian approach