Hassan Saeed Alzahrani

Tomato cv. super strain B was widely cultivated in Saudi Arabia under drought stress. Illumina Hiseq-2000 was used to create the transcriptional profile of tomato cultivar super strain B. A total of 98,069 contigs were gathered, with an average length of 766 bp. Most of the genes in the gene ontology (GO) analysis were categorized into molecular function (MF) of ATP binding (1301 genes), metal ion binding (456 genes), protein kinase activity (392 genes), transferase activity (299 genes), Biological process (BP) of DNA-templated genes (366 genes), and regulation of transcription genes (209 genes), while cellular components (CC) of integral component of membrane (436 genes). The most dominant enzymes expressed were transferases (645 sequences). According to the KEGG pathway database, 15,638 transcripts were interpreted in 125 exclusive pathways. The major pathway groups were metabolic pathways (map01100, 315 genes) and biosynthesis of secondary metabolites (map01110, 188 genes). The total number of variants in the twelve chromosomes of super strain B compared with the tomato genome was 5284. The total number of potential SSRs was 5047 in 4806 unigenes. Trinucleotide repeats (3006, 59.5%) were the most found type in the transcriptome. A total of 4541 SNPs and 744 INDELs in tomato super strain B were identified when compared with the tomato genome.

This study explored the role of exogenous α-Toc (0.5 mM) and Asc (1 mM) in alleviating the damaging effects of salt stress in rapeseed plants (Brassica campestris cv. BARI Sarisha-17). Exposure of 21-day-old plants to different levels of salt stress (75 mM and 150 mM NaCl) resulted in the higher accumulation of sodium ions (Na⁺), reduced potassium ion (K⁺) levels, lower K⁺/Na⁺ ratio, increased oxidative damage, chlorophyll (Chl) breakdown, and disrupted antioxidant and glyoxalase systems. Phenotype responses to salt stress included reductions in plant height, shoot fresh weight, dry weight, number of siliques plant⁻¹, silique length, number of seeds silique⁻¹, 1000-seed weight, and seed yield plant⁻¹. Exogenous α-Toc and Asc applications enhanced the levels of endogenous ascorbate, glutathione (GSH), AsA/dehydroascorbate ratios, GSH/glutathione disulfide, ascorbate peroxidase, monodehydroascorbate reductase, glutathione reductase, glutathione peroxidase, and catalase activities in the salt-stressed plants. Exogenous α-Toc and Asc enhanced antioxidant defense system components and insured better oxidative stress tolerance, as indicated by reduced hydrogen peroxide generation, membrane lipid peroxidation, and electrolyte leakage. Exogenous α-Toc and Asc increased glyoxalase I and glyoxalase II activities in the salt-affected plants. Moreover, they regulated proline levels and increased the leaf relative water content, as well as the Chl level. Exogenous α-Toc and Asc also restored growth and improved yield attributes and seed yield per plants in the salt-affected rapeseed.

In this study, the role of zinc (Zn) in salt-affected soybean (Glycine max L.) was scrutinized by exposing plants to salt stress (150 mM NaCl) alone and in combination with exogenous Zn (priming and/or foliar spray with 1 mM ZnSO₄.7H₂O). Salt stress decreased plant growth and caused the destruction of chlorophyll and carotenoids. It also disrupted physiological processes and antioxidant defenses, resulting in an oxidative burst. The levels of the toxic metabolite methylglyoxal (MG) rose substantially under salinity. Salinity resulted in a high accumulation of Na⁺ and decreased K⁺ which decreased the K⁺/Na⁺ ratio. Zn supplementation decreased ion toxicity and improved ion homeostasis in soybean plants. Zn increased glutathione (GSH) levels, decreased glutathione disulfide levels, and increased their ratio in salt-treated soybean plants compared to salt-treated plants without Zn addition. Zn supplementation also upregulated the activities of the glutathione-dependent enzymes glutathione reductase, dehydroascorbate reductase, glutathione peroxidase, and glutathione S-transferase in salt-stressed plants. The enhanced GSH pool and increased activity of GSH-dependent enzymes decreased oxidative damage, as indicated by the reduced levels of H₂O₂ and malondialdehyde and lower electrolyte leakage. The increased GSH level and high activity of glyoxalase I and glyoxalase II conferred by Zn under salt stress helped to scavenge methylglyoxal. The restoration of photosynthetic pigment levels and increased proline accumulation, together with the recovery of leaf relative water content, were further signs of salt stress recovery and tolerance conferred by Zn supplementation. Our results showed that the antioxidant defense, glyoxalase system and some other physiological parameters were improved by Zn supplementation which contributed to mitigating the effects of salt stress in soybean.

Cadmium (Cd) and lead (Pb) contaminated soils have increased recently, resulting in limited crop productivity. The ameliorative role of potassium (K) and silicon (Si) is well established in plants under heavy metals stress; however, their combined role under the co-contamination of Cd and Pb is not well understood. We hypothesized that the synergistic application of K and Si would be more effective than their sole treatment for increasing the Pb and Cd tolerance and phytostabilization potential of quinoa (Chenopodium quinoa Willd.). In the current study, quinoa genotype ‘Puno’ was exposed to different concentrations of Cd (0, 200 µM), Pb (0, 500 µM) and their combination with or without 10 mM K and 1.0 mM Si supplementation. The results revealed that the combined stress of Cd and Pb was more detrimental than their separate application to plant biomass (66% less than the control), chlorophyll content and stomatal conductance. Higher accumulation of Pb and Cd led to a limited uptake of K and Si in quinoa plants. The supplementation of metal-stressed plants with 10 mM K and 1.0 mM Si, particularly in combination, caused a significant increase in the growth, stomatal conductance and pigment content of plants. The combined stress of Cd and Pb resulted in an overproduction of H₂O₂ (11-fold) and TBARS (13-fold) and a decrease in membrane stability (59%). Oxidative stress induced by metals was lessened by 8-fold, 9-fold, 7-fold and 11-fold increases in SOD, CAT, APX and POD activities, respectively, under the combined application of K and Si. It is concluded that the exogenous supply of K and Si in combination is very promising for increasing Cd and Pb tolerance and the phytostabilization potential of quinoa.

This investigation involved a comparative analysis of the small GTPase superfamily in S. lycopersicum super strain B compared to their analogues in leguminous and other non-leguminous species. The small GTPases superfamily members were recognized by tBLASTn searches. The sequences of amino acid were aligned using Clustal Omega and the analysis of phylogeny was performed with the MEGA7 package. Protein alignments were applied for all studied species. Three-dimensional models of RABA2, ROP9, and ROP10 from Solanum lycopersicum “Super strain B” were performed. The levels of mRNA of the Rab, Arf, Rop, and Ran subfamilies were detected in aerial tissues vs. roots. Significant divergences were found in the number of members and groups comprising each subfamily of the small GTPases and Glycine max had the highest count. High expression of Rab and Arf proteins was shown in the roots of legumes whilst in non-legume plants, the highest values were recorded in aerial tissues. S. lycopersicum super strain B had the highest expression of Rab and Arf proteins in its aerial tissues, which may indicate that diazotroph strains have supreme activities in the aerial tissues of strain B and act as associated N-fixing bacteria. The phylogenies of the small GTPase superfamily of the studied plants did not reveal asymmetric evolution of the Ra, Arf, Rop, and Ran subfamilies. Multiple sequence alignments derived from each of the Rab, Arf, and Rop proteins of S. lycopersicum super strain B showed a low frequency of substitutions in their domains. GTPases superfamily members have definite functions during infection, delivery, and maintenance of N₂-fixing diazotroph but show some alterations in their function among S. lycopersicum super strain B, and other species.

Quinoa is a climate resilience potential crop for food security due to high nutritive value. However, crop variable response to nitrogen (N) use efficiency may lead to affect grain quality and yield. This study compared the performance of contrasting quinoa genotypes (UAF Q-7, EMS-line and JQH1) to fertilizer urea enriched with urease and nitrification inhibitors (NIs; 1% (w/w) thiourea + boric acid + sodium thiosulphate), ordinary urea and with no N as control. Application of NIs-enriched urea improved plant growth, N uptake and chlorophyll values in quinoa genotype UAF-Q7 and JHQ1, however, highest nitrate reductase (NR) activity was observed in EMS-line. Quinoa plants supplied with NIs-enriched urea also completed true and multiple leaf stage, bud formation, flowering, and maturity stages earlier than ordinary urea and control, nevertheless, all quinoa genotypes reached true and multiple leaf stage, flowering and maturity stages at same time. Among photosynthetic efficiency traits, application of NIs-enriched urea expressed highest photosynthetic active radiations (PAR), electron transport rate (ETR), current fluorescence (Ft) and reduced quantum yield (Y) in EMS line. Nitrogen treatments had no significant difference for panicle length, however, among genotypes, UAF-Q7 showed highest length of panicle followed by others. Among yield attributes, NIs-enriched urea expressed maximum 1000-seed weight and seed yield per plant in JQH-1 hybrid and EMS-line. Likely, an increase in quinoa grain protein contents was observed in JQH-1 hybrid for NIs-enriched urea. In conclusion, NIs-enriched urea with urease and nitrification inhibitors simultaneously can be used to improve the N uptake, seed yield and grain protein contents in quinoa, however, better crop response was attributed to enhanced plant growth and photosynthetic efficiency.

Boron (B) performs physiological functions in higher plants as an essential micronutrient, but its protective role in salt stress is poorly understood. Soybean (Glycine max L.) is planted widely throughout the world, and salinity has adverse effects on its physiology. Here, the role of B (1 mM boric acid) in salt stress was studied by subjecting soybean plants to two levels of salt stress: mild (75 mM NaCl) and severe (150 mM NaCl). Exogenous B relieved oxidative stress by enhancing antioxidant defense system components, such as ascorbate (AsA) levels, AsA/dehydroascorbate ratios, glutathione (GSH) levels, the GSH and glutathione disulfide ratios, and ascorbate peroxidase, monodehydroascorbate reductase, and dehydroascorbate reductase activities. B also enhanced the methylglyoxal detoxification process by upregulation of the components of the glyoxalase system in salt-stressed plants. Overall, B supplementation enhanced antioxidant defense and glyoxalase system components to alleviate oxidative stress and MG toxicity induced by salt stress. B also improved the physiology of salt-affected soybean plants.

Salt stress adversely affects the growth and productivity of crops. However, reports suggest that the application of various micronutrients could help the plant to cope with this stress. Hence, the objective of the study was to examine the effect of exogenous application of Zinc (Zn) on salt tolerance in Vigna radiata (L.) Wilczek (mungbean). Mungbean is considered to be an economically important crop and possess a strategic position in Southeast Asian countries for sustainable crop production. It is rich in quality proteins, minerals and vitamins. Three weeks old grown seedlings were subjected to NaCl (150 mM and 200 mM) alone or with Zn (250 µM). After 21 days of treatment, plants were harvested for investigating morphological, physiological and biochemical changes. We found that the Zn application mitigates the negative effect upon plant growth to a variable extent. This may be attributed to the increased shoot and root length, improved chlorophyll and carotenoid contents, enhanced total soluble sugar (TSS), total soluble protein (TSP) and proline accumulation, decreased H₂O₂ content and increased enzymatic antioxidant activities. Zn’s application improved the performance of the enzymes such as phenylalanine ammonia-lyase (PAL) and tyrosine ammonia-lyase (TAL) of the secondary metabolism, which resulted in the improvement of total phenol and flavonoids. The antioxidant activities such as 1,1diphenyl 2-picryl hydrazine (DPPH) and ferrous reducing antioxidant power assay (FRAP) of the plants also showed improved results in their salt only treatments. Furthermore, hydrogen peroxide (H₂O₂) and superoxide radical (SOD) scavenging activity were also improved upon the application of 250 µM zinc. Thus, Zn application in low doses offers promising potential for recovering plants suffering from salinity stress. In conclusion, we assume that zinc application improved salt tolerance in mungbean through the improvement of various physiological and photochemical processes which could prove to be useful in nutrient mediated management for crop improvement.

The potential protective role of priming wheat seeds with maize green extract (MGE) against the stress effects of drought was studied. Pretreatment using MGE, MGE enriched with polyamines (MGE_PA), and drought treatments (irrigation deficit of 30% (severe drought) or 60% (moderate drought) versus 90% relative water content of soil as a control) were applied in a factorial completely randomized design. Under moderate drought, pretreatment with MGE_PA outperformed MGE and control, while severely stressed plants died even with pretreatments. Both extracts enhanced normal plant growth and yield and mitigated the deleterious effect of moderately stressed plants. Application of both extracts markedly increased photosynthetic efficiency, membrane stability, relative water content, and accumulation of antioxidants, osmoprotectants, trans- and cis-zeatin, polyamines, and their gene expressions, while levels of superoxide (O₂^•−) and hydrogen peroxide (H₂O₂), lipid peroxidation, and electrolyte leakage were decreased. Enzymatic antioxidants and glyoxalase system activities were improved in moderately stressed plants and were further improved with pretreatment with both extracts, thus protecting plants from oxidative damage by up-regulation of the ascorbate–glutathione cycle. Glycine betaine, soluble sugars, and proline levels were greatly increased in pretreated plants, thus maintaining membrane stability and photosynthetic efficiency. The interaction between drought and pretreatment using MGE_PA was significant in growing wheat plants in dry environments with 60% relative water content of soil.

For maize, the potential preventive role of foliar spraying with an extract derived from maize grain (MEg, 2%), silymarin (Sm, 0.5 mM), or silymarin-enriched MEg (MEg-Sm) in attenuating the stress effects of cadmium (Cd, 0.5 mM) was examined using a completely randomized design layout. Under normal conditions, foliar spraying with MEg, Sm, or MEg-Sm was beneficial (with MEg-Sm preferred) for maize plants, whereas the benefit was more pronounced under Cd stress. The use of Cd through irrigation water decreased plant growth traits, photosynthetic efficiency, including instantaneous carboxylation efficiency, Fv/Fm, and pigment contents, and hormonal contents (e.g., auxin, gibberellins, cytokinins including trans-zeatin, and salicylic acid). These undesired findings were due to an increase in Cd content, leading to increased levels of oxidative stress (O₂^•− and H₂O₂), ionic leakage, and lipid peroxidation. Therefore, this damage resulted in an increase in the activities of nonenzymatic antioxidants, Sm, antioxidative enzymes, and enzyme gene expression. However, under Cd stress, although foliar spray with MEg or Sm had better findings than control, MEg-Sm had better findings than MEg or Sm. Application of MEg-Sm greatly increased photosynthesis efficiency, restored hormonal homeostasis, and further increased the activities of various antioxidants, Sm, antioxidative enzymes, and enzyme gene expression. These desired findings were due to the suppression of the Cd content, and thus the levels of O₂^•−, H₂O₂, ionic leakage, and lipid peroxidation, which were positively reflected in the growth and accumulation of dry matter in maize plants. The data obtained in this study recommend applying silymarin-enriched maize grain extract (MEg-Sm at 0.24 g Sm L⁻¹ of MEg) as a spray solution to maize plants when exposed to excess Cd in soil or irrigation water.