Kyle Wickings

Plant response to water stress can be modified by the rhizosphere microbial community, but the range of responses across plant genotypes is unclear. We imposed drought conditions on 116 Festuca arundinacea (tall fescue) accessions using a rainout shelter for 46 days, followed by irrigation, to stimulate drought recovery in 24 days. We hypothesized that prolonged water deficit results in a range of phenotypic diversity (i.e., green color index) across tall fescue genotypes that are associated with distinct microbial taxonomic and functional traits impacting plant drought tolerance. Microbial extracellular enzyme activities of chitinase and phenol oxidase (targeting chitin and lignin) increased in rhizospheres of the 20 most drought tolerant genotypes. Lower rates of fungal (dark septate) endophyte root infection were found in roots of the most drought tolerant genotypes. Bacterial 16S rRNA gene and fungal ITS sequencing showed shifts in microbial communities across water deficit conditions prior to drought, during drought, and at drought recovery, but was not patterned by drought tolerance levels of the plant host. The results suggest that taxonomic information from bacterial 16S rRNA gene and fungal ITS sequences provided little indication of microbial composition impacting drought tolerance of the host plant, but instead, microbial extracellular enzyme activities and root fungal infection results revealed patterned responses from drought.

Urban soils differ from those in other managed ecosystems in many ways, including their heterogeneity, unique organic matter inputs and exposure to past and present anthropogenic activities. Soil processes in urban systems are influenced by the microbiome, specifically bacterial and fungal communities that are currently recognized as the primary drivers of soil organic matter dynamics. However, our understanding of biotic controls on microbial communities is incomplete, particularly in regard to the roles of invertebrates. We aim to highlight how invertebrates and their interactions with microbial communities may shape ecosystem processes in urban systems. We discuss three primary pathways through which invertebrates are known to influence the soil microbiome: dispersal of microorganisms throughout soils, grazing on microbial biomass, and mixing of organic inputs within soils and subsequently altering microbial resource accessibility. These invertebrate-mediated pathways may be particularly important because of their influence on soil microbiomes of urban systems. We also propose future research directions aimed at quantifying the influence of invertebrates on soil microbial processes to gain a more comprehensive understanding of urban microbiome function. Understanding the impact of invertebrates on the microbiome of urban systems can potentially lead to better management of microbiomes and enhance microbe-driven ecosystem services.

Despite decades of research, our understanding of the importance of invertebrates for soil biogeochemical processes remains incomplete. This is especially true when considering soil invertebrate effects mediated through their interactions with soil microbes. The aim of this study was to elucidate how soil macroinvertebrates affect soil microbial community composition and function within the root zone of a managed grass system. We conducted a two-year field mesocosm study in which soil macroinvertebrate communities were manipulated through size-based exclusion and tracked changes in microbial community composition, diversity, biomass and activity to quantify macroinvertebrate-driven effects on microbial communities and their functions within the rhizosphere. The presence of soil macroinvertebrates created distinct microbial communities and altered both microbial biomass and function. Soil macroinvertebrates increased bacterial diversity and fungal biomass, as well as increased phenol oxidase and glucosidase activities, which are important in the degradation of organic matter. Macroinvertebrates also caused distinct shifts in the relative abundance of different bacterial phyla. Our findings indicate that within the rhizosphere, macroinvertebrates have a stimulatory effect on microbial communities and processes, possibly due to low-intensity microbial grazing or through the dispersal of microbial cells and spores by mobile invertebrates. Our results suggest that macroinvertebrate activity can be an important control on microbially-mediated processes in the rhizosphere such as nitrogen mineralization and soil organic matter formation.

In this study, the utility of inoculative releases of local strains of Heterorhabditis bacteriophora and Steinernema feltiae isolated from northern New York (NY) State for managing soil-dwelling pests in sod (turfgrass production systems) was evaluated. The objectives of the project were to (a) quantify changes in biocontrol potential during the sod production process and (b) evaluate the potential for the nematodes to suppress populations of soil-dwelling turf pests following harvest and installation at a new site. A field study was conducted on four sod fields in central NY State on soils with varying texture and organic matter content, and a post-harvest sod installation study was performed in the greenhouse on a sandy loam soil. Nematode-induced mortality of Galleria mellonella was increased significantly one month following inoculation but differed between fields with different soil types, likely due to variation in soil organic matter content. In the following year, nematode persistence in sod fields was low, likely driven by moderate to severe drought conditions. In contrast, upon harvest and installation, significant nematode-induced mortality was observed in soil receiving an installation of muck-produced sod. Enhanced nematode-induced mortality was detected in both the greater wax moth and third instar Japanese beetle larvae. This study indicates that inoculation of sod with entomopathogenic nematodes can improve biocontrol potential during sod production and after harvest, however, the utility of this practice is sensitive to soil conditions, and likely most efficacious on coarse-textured soils with high organic matter.

As vertebrate carrion decomposes, there is a release of nutrient-rich fluids into the underlying soil, which can impact associated biological community structure and function. How these changes alter soil biogeochemical cycles is relatively unknown and may prove useful in the identification of carrion decomposition islands that have long lasting, focal ecological effects. This study investigated the spatial (0, 1, and 5 m) and temporal (3–732 days) dynamics of human cadaver decomposition on soil bacterial and arthropod community structure and microbial function. We observed strong evidence of a predictable response to cadaver decomposition that varies over space for soil bacterial and arthropod community structure, carbon (C) mineralization and microbial substrate utilization patterns. In the presence of a cadaver (i.e., 0 m samples), the relative abundance of Bacteroidetes and Firmicutes was greater, while the relative abundance of Acidobacteria, Chloroflexi, Gemmatimonadetes, and Verrucomicrobia was lower when compared to samples at 1 and 5 m. Micro-arthropods were more abundant (15 to 17-fold) in soils collected at 0 m compared to either 1 or 5 m, but overall, micro-arthropod community composition was unrelated to either bacterial community composition or function. Bacterial community structure and microbial function also exhibited temporal relationships, whereas arthropod community structure did not. Cumulative precipitation was more effective in predicting temporal variations in bacterial abundance and microbial activity than accumulated degree days. In the presence of the cadaver (i.e., 0 m samples), the relative abundance of Actinobacteria increased significantly with cumulative precipitation. Furthermore, soil bacterial communities and C mineralization were sensitive to the introduction of human cadavers as they diverged from baseline levels and did not recover completely in approximately 2 years. These data are valuable for understanding ecosystem function surrounding carrion decomposition islands and can be applicable to environmental bio-monitoring and forensic sciences.

Turfgrass is an important cropping system covering >16 million hectares in the United States. Synthetic insecticides, which are important tools in managing several key insect pests in these landscapes, have been implicated in the decline of managed and wild pollinators. The public perception linking the use of chemical insecticides to pollinator population declines threatens their future use and our ability to maintain functional and aesthetically acceptable landscapes. Extension and research entomologists from across the United States met in 2016 for the “Summit for Protecting Pollinators in Turf” to review the scientific literature on nontarget impacts of pest management practices on pollinators in turfgrass landscapes, to develop best management practices for protecting these organisms, and to identify knowledge gaps and prioritize future research needs. The group identified that there is a scarcity of detailed research on pollinator health in turf landscapes and has prioritized areas where research was most needed to conserve pollinator populations while balancing the needs for maintaining healthy turfgrass.

Red imported fire ants, Solenopsis invicta, are generalist predators that can have major impacts on foliar arthropod communities in agricultural systems; however, their effects as predators at the soil surface have not been adequately characterized. We examined the contribution of fire ants to predation at the soil surface and in cotton foliage at two sites and over the course of two field seasons in Georgia, using egg masses of the beet armyworm, Spodoptera exigua. To assess interactions between fire ants and other arthropod species, we also measured the densities of edaphic predators and honeydew‐producing hemipterans at both sites. The sites occurred in different growing regions (Piedmont and Coastal Plain), and allowed us to characterize the importance of fire ants as predators under different climatic and soil conditions. Fire ant suppression decreased egg predation at both field sites, and predation by fire ants at the soil surface was equal to if not greater than that in cotton foliage. However, the impact of fire ants on predation varied between sites, likely due to differences in climate and the composition and activity of the extant arthropod communities. Our study also indicates that fire ant suppression is associated with decreases in the density of honeydew‐producing insects, and increasing abundance of whiteflies on the plants coincided with a decrease in egg predation at the soil surface. This finding suggests the mutualism between ants and whiteflies may lead to a shift in predation intensity from edaphic towards plant‐based food webs.