Ronal Pacheco

Calreticulins are multifunctional proteins involved in calcium homeostasis, protein folding, and cellular signaling. In common bean ( Phaseolus vulgaris ), the molecular mechanisms that regulate infection and nodule development remain incompletely understood. The main objective of this study was to characterize the role of the calreticulin gene PvCRT08 during infection and nodulation processes. We first analyzed the calreticulin gene family in the P. vulgaris genome and identified three members, with PvCRT08 showing the highest transcript accumulation in roots and after inoculation with rhizobia. Spatial and temporal promoter analyses in transgenic composite bean roots revealed PvCRT08 activity in root hairs and in infected cells and vascular bundles of mature nodules. RNA interference (RNAi)-mediated PvCRT08 down-regulation in transgenic roots increased the number of infection threads and enhanced nitrogen fixation efficiency, leading to the formation of larger and more functional nodules, although total nodule number was unaffected. In contrast, overexpression of PvCRT08 impaired infection thread progression, reduced the expression of key nodulation marker genes ( PvCyclin and PvNIN) , decreased nodule number, and diminished nitrogen fixation capacity. These findings identify PvCRT08 as a key regulatory component of early infection events and nodule development in common bean. Furthermore, the study provides new insights into the molecular control of symbiotic efficiency and highlights PvCRT08 expression is critical to optimize the equilibrium between infection efficiency and nodule functionality.

Plant phospholipase C (PLC) proteins are phospholipid-degrading enzymes classified into two subfamilies: phosphoinositide-specific PLCs (PI-PLCs) and non-specific PLCs (NPCs). PI-PLCs have been widely studied in various biological contexts, including responses to abiotic and biotic stresses and plant development; NPCs have been less thoroughly studied. No PLC subfamily has been characterized in relation to the symbiotic interaction between Fabaceae (legume) species and the nitrogen-fixing bacteria called rhizobia. However, lipids are reported to be crucial to this interaction, and PLCs may therefore contribute to regulating legume–rhizobia symbiosis. In this work, we functionally characterized NPC4 from common bean ( Phaseolus vulgaris L.) during rhizobial symbiosis, finding evidence that NPC4 plays an important role in bean root development. The knockdown of PvNPC4 by RNA interference (RNAi) resulted in fewer and shorter primary roots and fewer lateral roots than were seen in control plants. Importantly, this phenotype seems to be related to altered auxin signaling. In the bean–rhizobia symbiosis, PvNPC4 transcript abundance increased 3 days after inoculation with Rhizobium tropici . Moreover, the number of infection threads and nodules, as well as the transcript abundance of PvEnod40 , a regulatory gene of early stages of symbiosis, decreased in PvNPC4 -RNAi roots. Additionally, transcript abundance of genes involved in autoregulation of nodulation (AON) was altered by PvNPC4 silencing. These results indicate that PvNPC4 is a key regulator of root and nodule development, underscoring the participation of PLC in rhizobial symbiosis.

The common bean (Phaseolus vulgaris L.) is one of the legumes used to study the molecular mechanisms that regulate mycorrhizal and rhizobial symbioses. To study these mechanisms, the generation of transgenic hairy roots is a very advantageous method for applying genetic approaches. However, the generation of hairy roots is a difficult task that requires a lot of skill and experience. Here we show a new version of an optimized protocol for the generation of hairy roots in common bean. This version includes photos and videos showing the procedure for preparing the Agrobacterium rhizogenes culture and the infection procedure, which were not included in the original version. Additionally, we included a step for growing hairy roots under hydroponic conditions.

The common bean (Phaseolus vulgaris L.) is one of the legumes used to study the molecular mechanisms that regulate mycorrhizal and rhizobial symbioses. To study these mechanisms, the generation of transgenic hairy roots is a very advantageous method for applying genetic approaches. However, the generation of hairy roots is a difficult task that requires a lot of skill and experience. Here we show a new version of an optimized protocol for the generation of hairy roots in common bean. This version includes videos showing the procedure for preparing the Agrobacterium rhizogenes culture and the infection procedure, which were not included in the original version.

Metallothioneins (MTs) constitute a heterogeneous family of ubiquitous metal ion-binding proteins. In plants, MTs participate in the regulation of cell growth and proliferation, protection against heavy metal stress, oxidative stress responses, and responses to pathogen attack. Despite their wide variety of functions, the role of MTs in symbiotic associations, specifically nodule-fabacean symbiosis, is poorly understood. Here, we analyzed the role of the PvMT1A gene in Phaseolus vulgaris-Rhizobium tropici symbiosis using bioinformatics and reverse genetics approaches. Using in silico analysis, we identified six genes encoding MTs in P. vulgaris, which were clustered into three of the four classes described in plants. PvMT1A transcript levels were significantly higher in roots inoculated with R. tropici at 7 and 30 days post inoculation (dpi) than in non-inoculated roots. Functional analysis showed that downregulating PvMT1A by RNA interference (RNAi) reduced the number of infection events at 7 and 10 dpi and the number of nodules at 14 and 21 dpi. In addition, nodule development was negatively affected in PvMT1A:RNAi transgenic roots, and these nodules displayed a reduced nitrogen fixation rate at 21 dpi. These results strongly suggest that PvMT1A plays an important role in the infection process and nodule development in P. vulgaris during rhizobial symbiosis.

The plant receptor-like-kinase subfamily CrRLK1L has been widely studied, and CrRLK1Ls have been described as crucial regulators in many processes in Arabidopsis thaliana (L.), Heynh. Little is known, however, about the functions of these proteins in other plant species, including potential roles in symbiotic nodulation. We performed a phylogenetic analysis of CrRLK1L subfamily receptors of 57 different plant species and identified 1050 CrRLK1L proteins, clustered into 11 clades. This analysis revealed that the CrRLK1L subfamily probably arose in plants during the transition from chlorophytes to embryophytes and has undergone several duplication events during its evolution. Among the CrRLK1Ls of legumes and A. thaliana, protein structure, gene structure, and expression patterns were highly conserved. Some legume CrRLK1L genes were active in nodules. A detailed analysis of eight nodule-expressed genes in Phaseolus vulgaris L. showed that these genes were differentially expressed in roots at different stages of the symbiotic process. These data suggest that CrRLK1Ls are both conserved and underwent diversification in a wide group of plants, and shed light on the roles of these genes in legume–rhizobia symbiosis.