Phoebe A. Woodworth-Jefcoats
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Research Interests
Phoebe A. Woodworth-Jefcoats has a total of 130 co-authors. Here are the top co-authors by number of shared publications:
- Julia L. Blanchard
University of Tasmania
9 shared publications - Camilla Novaglio
Institute of Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
7 shared publications - Jonathan Charles Reum
NOAA Alaska Fisheries Science Center Seattle WA USA
7 shared publications - Andrea Bryndum-Buchholz
Centre for Fisheries Ecosystems Research Fisheries & Marine Institute Memorial University St. John's NL Canada
6 shared publications - Cheryl Shannon Harrison
Department of Ocean and Coastal Science and Center for Computation and Technology, Louisiana State University, Baton Rouge, Louisiana, USA
6 shared publications - Denisse Fierro Arcos
Integrated Marine Observing System, Hobart, Australia
6 shared publications
Latest Publications
- Open Access
- 3 March 2025
- Published by American Geophysical Union (AGU) in Earth's Future
- Vol. 13 (3)
Global and Regional Marine Ecosystem Models Reveal Key Uncertainties in Climate Change Projections
Climate change is affecting ocean temperature, acidity, currents, and primary production, causing shifts in species distributions, marine ecosystems, and ultimately fisheries. Earth system models simulate climate change impacts on physical and biogeochemical properties of future oceans under varying emissions scenarios. Coupling these simulations with an ensemble of global marine ecosystem models has indicated broad decreases of fish biomass with warming. However, regional details of these impacts remain much more uncertain. Here, we employ CMIP5 and CMIP6 climate change impact projections using two Earth system models coupled with four regional and nine global marine ecosystem models in 10 ocean regions to evaluate model agreement at regional scales. We find that models developed at different scales can lead to stark differences in biomass projections. On average, global models projected greater biomass declines by the end of the 21st century than regional models. For both global and regional models, greater biomass declines were projected using CMIP6 than CMIP5 simulations. Global models projected biomass declines in 86% of CMIP5 simulations for ocean regions compared to 50% for regional models in the same ocean regions. In CMIP6 simulations, all global model simulations projected biomass declines in ocean regions by 2100, while regional models projected biomass declines in 67% of the ocean region simulations. Our analysis suggests that improved understanding of the causes of differences between global and regional marine ecosystem model climate change projections is needed, alongside observational evaluation of modeled responses.
- 3 March 2025
- Published by American Geophysical Union (AGU) in Earth's Future
- Vol. 13 (3)
Open AccessGlobal and Regional Marine Ecosystem Models Reveal Key Uncertainties in Climate Change Projections
Climate change is affecting ocean temperature, acidity, currents, and primary production, causing shifts in species distributions, marine ecosystems, and ultimately fisheries. Earth system models simulate climate change impacts on physical and biogeochemical properties of future oceans under varying emissions scenarios. Coupling these simulations with an ensemble of global marine ecosystem models has indicated broad decreases of fish biomass with warming. However, regional details of these impacts remain much more uncertain. Here, we employ CMIP5 and CMIP6 climate change impact projections using two Earth system models coupled with four regional and nine global marine ecosystem models in 10 ocean regions to evaluate model agreement at regional scales. We find that models developed at different scales can lead to stark differences in biomass projections. On average, global models projected greater biomass declines by the end of the 21st century than regional models. For both global and regional models, greater biomass declines were projected using CMIP6 than CMIP5 simulations. Global models projected biomass declines in 86% of CMIP5 simulations for ocean regions compared to 50% for regional models in the same ocean regions. In CMIP6 simulations, all global model simulations projected biomass declines in ocean regions by 2100, while regional models projected biomass declines in 67% of the ocean region simulations. Our analysis suggests that improved understanding of the causes of differences between global and regional marine ecosystem model climate change projections is needed, alongside observational evaluation of modeled responses.
- Open Access
- 14 February 2025
- Published by American Geophysical Union (AGU) in Earth's Future
- Vol. 13 (2)
An Integrated Global‐To‐Regional Scale Workflow for Simulating Climate Change Impacts on Marine Ecosystems
As the urgency to evaluate the impacts of climate change on marine ecosystems increases, there is a need to develop robust projections and improve the uptake of ecosystem model outputs in policy and planning. Standardizing input and output data is a crucial step in evaluating and communicating results, but can be challenging when using models with diverse structures, assumptions, and outputs that address region‐specific issues. We developed an implementation framework and workflow to standardize the climate and fishing forcings used by regional models contributing to the Fisheries and Marine Ecosystem Model Intercomparison Project (FishMIP) and to facilitate comparative analyses across models and a wide range of regions, in line with the FishMIP 3a protocol. We applied our workflow to three case study areas‐models: the Baltic Sea Mizer, Hawai'i‐based Longline fisheries therMizer, and the southern Benguela ecosystem Atlantis marine ecosystem models. We then selected the most challenging steps of the workflow and illustrated their implementation in different model types and regions. Our workflow is adaptable across a wide range of regional models, from non‐spatially explicit to spatially explicit and fully‐depth resolved models and models that include one or several fishing fleets. This workflow will facilitate the development of regional marine ecosystem model ensembles and enhance future research on marine ecosystem model development and applications, model evaluation and benchmarking, and global‐to‐regional model comparisons.
- 14 February 2025
- Published by American Geophysical Union (AGU) in Earth's Future
- Vol. 13 (2)
Open AccessAn Integrated Global‐To‐Regional Scale Workflow for Simulating Climate Change Impacts on Marine Ecosystems
As the urgency to evaluate the impacts of climate change on marine ecosystems increases, there is a need to develop robust projections and improve the uptake of ecosystem model outputs in policy and planning. Standardizing input and output data is a crucial step in evaluating and communicating results, but can be challenging when using models with diverse structures, assumptions, and outputs that address region‐specific issues. We developed an implementation framework and workflow to standardize the climate and fishing forcings used by regional models contributing to the Fisheries and Marine Ecosystem Model Intercomparison Project (FishMIP) and to facilitate comparative analyses across models and a wide range of regions, in line with the FishMIP 3a protocol. We applied our workflow to three case study areas‐models: the Baltic Sea Mizer, Hawai'i‐based Longline fisheries therMizer, and the southern Benguela ecosystem Atlantis marine ecosystem models. We then selected the most challenging steps of the workflow and illustrated their implementation in different model types and regions. Our workflow is adaptable across a wide range of regional models, from non‐spatially explicit to spatially explicit and fully‐depth resolved models and models that include one or several fishing fleets. This workflow will facilitate the development of regional marine ecosystem model ensembles and enhance future research on marine ecosystem model development and applications, model evaluation and benchmarking, and global‐to‐regional model comparisons.
- Open Access
- 21 December 2024
- Published by American Geophysical Union (AGU) in Earth's Future
- Vol. 12 (12)
Detecting, Attributing, and Projecting Global Marine Ecosystem and Fisheries Change: FishMIP 2.0
There is an urgent need for models that can robustly detect past and project future ecosystem changes and risks to the services that they provide to people. The Fisheries and Marine Ecosystem Model Intercomparison Project (FishMIP) was established to develop model ensembles for projecting long‐term impacts of climate change on fisheries and marine ecosystems while informing policy at spatio‐temporal scales relevant to the Inter‐Sectoral Impact Model Intercomparison Project (ISIMIP) framework. While contributing FishMIP models have improved over time, large uncertainties in projections remain, particularly in coastal and shelf seas where most of the world's fisheries occur. Furthermore, previous FishMIP climate impact projections have been limited by a lack of global standardized historical fishing data, low resolution of coastal processes, and uneven capabilities across the FishMIP community to dynamically model fisheries. These features are needed to evaluate how reliably the FishMIP ensemble captures past ecosystem states ‐ a crucial step for building confidence in future projections. To address these issues, we have developed FishMIP 2.0 comprising a two‐track framework for: (a) Model evaluation and attribution of past changes and (b) future climate and socioeconomic scenario projections. Key advances include improved historical climate forcing, which captures oceanographic features not previously resolved, and standardized global fishing forcing to test fishing effects systematically across models. FishMIP 2.0 is a crucial step toward a detection and attribution framework for changing marine ecosystems and toward enhanced policy relevance through increased confidence in future ensemble projections. Our results will help elucidate pathways toward achieving sustainable development goals.
- 21 December 2024
- Published by American Geophysical Union (AGU) in Earth's Future
- Vol. 12 (12)
Open AccessDetecting, Attributing, and Projecting Global Marine Ecosystem and Fisheries Change: FishMIP 2.0
There is an urgent need for models that can robustly detect past and project future ecosystem changes and risks to the services that they provide to people. The Fisheries and Marine Ecosystem Model Intercomparison Project (FishMIP) was established to develop model ensembles for projecting long‐term impacts of climate change on fisheries and marine ecosystems while informing policy at spatio‐temporal scales relevant to the Inter‐Sectoral Impact Model Intercomparison Project (ISIMIP) framework. While contributing FishMIP models have improved over time, large uncertainties in projections remain, particularly in coastal and shelf seas where most of the world's fisheries occur. Furthermore, previous FishMIP climate impact projections have been limited by a lack of global standardized historical fishing data, low resolution of coastal processes, and uneven capabilities across the FishMIP community to dynamically model fisheries. These features are needed to evaluate how reliably the FishMIP ensemble captures past ecosystem states ‐ a crucial step for building confidence in future projections. To address these issues, we have developed FishMIP 2.0 comprising a two‐track framework for: (a) Model evaluation and attribution of past changes and (b) future climate and socioeconomic scenario projections. Key advances include improved historical climate forcing, which captures oceanographic features not previously resolved, and standardized global fishing forcing to test fishing effects systematically across models. FishMIP 2.0 is a crucial step toward a detection and attribution framework for changing marine ecosystems and toward enhanced policy relevance through increased confidence in future ensemble projections. Our results will help elucidate pathways toward achieving sustainable development goals.
- Open Access
- 16 May 2024
- Published by Wiley
An Integrated Global-to-Regional Scale Workflow for Simulating Climate Change Impacts on Marine Ecosystems
As the urgency to evaluate the impacts of climate change on marine ecosystems increases, there is a need to develop robust projections and improve the uptake of ecosystem model outputs in policy and planning. Standardising input and output data is a crucial step in evaluating and communicating results, but can be challenging when using models with diverse structures, assumptions, and outputs that address region-specific issues. We developed an implementation framework and workflow to standardise the climate and fishing forcings used by regional models contributing to the Fisheries and Marine Ecosystem Model Intercomparison Project (FishMIP) and to facilitate comparative analyses across models and a wide range of regions, in line with the FishMIP 3a protocol. We applied our workflow to three case study areas-models: the Baltic Sea Mizer, Hawai’i-based Longline fisheries therMizer, and the southern Benguela ecosystem Atlantis marine ecosystem models. We then selected the most challenging steps of the workflow and illustrated their implementation in different model types and regions. Our workflow is adaptable across a wide range of regional models, from non-spatially explicit to spatially explicit and fully-depth resolved models and models that include one or several fishing fleets. This workflow will facilitate the development of regional marine ecosystem model ensembles and enhance future research on marine ecosystem model development and applications, model evaluation and benchmarking, and global-to-regional model comparisons.
- 16 May 2024
- Published by Wiley
Open AccessAn Integrated Global-to-Regional Scale Workflow for Simulating Climate Change Impacts on Marine Ecosystems
As the urgency to evaluate the impacts of climate change on marine ecosystems increases, there is a need to develop robust projections and improve the uptake of ecosystem model outputs in policy and planning. Standardising input and output data is a crucial step in evaluating and communicating results, but can be challenging when using models with diverse structures, assumptions, and outputs that address region-specific issues. We developed an implementation framework and workflow to standardise the climate and fishing forcings used by regional models contributing to the Fisheries and Marine Ecosystem Model Intercomparison Project (FishMIP) and to facilitate comparative analyses across models and a wide range of regions, in line with the FishMIP 3a protocol. We applied our workflow to three case study areas-models: the Baltic Sea Mizer, Hawai’i-based Longline fisheries therMizer, and the southern Benguela ecosystem Atlantis marine ecosystem models. We then selected the most challenging steps of the workflow and illustrated their implementation in different model types and regions. Our workflow is adaptable across a wide range of regional models, from non-spatially explicit to spatially explicit and fully-depth resolved models and models that include one or several fishing fleets. This workflow will facilitate the development of regional marine ecosystem model ensembles and enhance future research on marine ecosystem model development and applications, model evaluation and benchmarking, and global-to-regional model comparisons.
- Open Access
- 10 May 2024
- Published by Wiley
Global and regional marine ecosystem model climate change projections reveal key uncertainties
Climate change is affecting ocean temperature, acidity, currents, and primary production, causing shifts in species distributions, marine ecosystems, and ultimately fisheries. Earth system models simulate climate change impacts on physical and biogeochemical properties of future oceans under varying emissions scenarios. Coupling these simulations with an ensemble of global marine ecosystem models indicates decreasing global fish biomass with warming. However, regional projections of these impacts remain much more uncertain. Here, we employ CMIP5 and CMIP6 climate change impact projections using two Earth system models coupled with four regional and nine global marine ecosystem models in ten ocean regions to evaluate model agreement at regional scales. We find that models developed at different scales can lead to stark differences in biomass projections. On average, global models projected greater biomass declines by the end of the 21st century than regional models. For both global and regional models, greater biomass declines were projected using CMIP6 than CMIP5 simulations. Global models projected biomass declines in 86% of CMIP5 simulations for ocean regions compared to 50% for regional models in the same ocean regions. In CMIP6 simulations, all global model simulations projected biomass declines in ocean regions by 2100, while regional models projected biomass declines in 67% of the ocean region simulations. Our analysis suggests that improved understanding of the causes of differences between global and regional marine ecosystem model climate change projections is needed, alongside observational evaluation of modelled responses.
- 10 May 2024
- Published by Wiley
Open AccessGlobal and regional marine ecosystem model climate change projections reveal key uncertainties
Climate change is affecting ocean temperature, acidity, currents, and primary production, causing shifts in species distributions, marine ecosystems, and ultimately fisheries. Earth system models simulate climate change impacts on physical and biogeochemical properties of future oceans under varying emissions scenarios. Coupling these simulations with an ensemble of global marine ecosystem models indicates decreasing global fish biomass with warming. However, regional projections of these impacts remain much more uncertain. Here, we employ CMIP5 and CMIP6 climate change impact projections using two Earth system models coupled with four regional and nine global marine ecosystem models in ten ocean regions to evaluate model agreement at regional scales. We find that models developed at different scales can lead to stark differences in biomass projections. On average, global models projected greater biomass declines by the end of the 21st century than regional models. For both global and regional models, greater biomass declines were projected using CMIP6 than CMIP5 simulations. Global models projected biomass declines in 86% of CMIP5 simulations for ocean regions compared to 50% for regional models in the same ocean regions. In CMIP6 simulations, all global model simulations projected biomass declines in ocean regions by 2100, while regional models projected biomass declines in 67% of the ocean region simulations. Our analysis suggests that improved understanding of the causes of differences between global and regional marine ecosystem model climate change projections is needed, alongside observational evaluation of modelled responses.
- Open Access
- 13 March 2024
- Published by American Geophysical Union (AGU) in Earth's Future
- Vol. 12 (3)
Temperature‐Dependence Assumptions Drive Projected Responses of Diverse Size‐Based Food Webs to Warming
Food web projections are critical for evaluating potential risks to ecosystems and fisheries under global warming. The temperature dependence of biological processes and regional differences in food web structure are two important sources of uncertainty and variation in climate forced projections of fish communities, but we do not know their magnitude or relative contribution. Here we systematically evaluated a range of different assumptions about temperature‐dependence on rates, including size‐dependent effects, controlling food intake, metabolism, and non‐predation mortality in fishes using species‐resolved size spectrum food web models that link individual‐level physiological processes to population and community dynamics. We simulated the physiological effect of warming in a range of size‐structured food web models calibrated to different marine ecosystems and in simplified trait‐based models. Higher food intake in warmed conditions increased total fish biomass, catches, and mean body weight, but these effects were offset by the negative effects of warming on metabolism and mortality, which combined resulted in lower total biomasses and catches for most food webs. These effects were enhanced when warming increased metabolic rates more than food intake, and the outcomes were also sensitive to size dependency of temperature responses. Importantly, these general patterns were not uniform across all food webs—individual functional groups and fish species within food webs responded to warming in different ways depending on their position in the food web and its structure. Hence, caution is warranted when generalizing food web or species outcomes to warming because they are mediated by community interactions. Uncertainty related to temperature dependence and ecological interactions will impact food web projections and should be represented in climate change projections.
- 13 March 2024
- Published by American Geophysical Union (AGU) in Earth's Future
- Vol. 12 (3)
Open AccessTemperature‐Dependence Assumptions Drive Projected Responses of Diverse Size‐Based Food Webs to Warming
Food web projections are critical for evaluating potential risks to ecosystems and fisheries under global warming. The temperature dependence of biological processes and regional differences in food web structure are two important sources of uncertainty and variation in climate forced projections of fish communities, but we do not know their magnitude or relative contribution. Here we systematically evaluated a range of different assumptions about temperature‐dependence on rates, including size‐dependent effects, controlling food intake, metabolism, and non‐predation mortality in fishes using species‐resolved size spectrum food web models that link individual‐level physiological processes to population and community dynamics. We simulated the physiological effect of warming in a range of size‐structured food web models calibrated to different marine ecosystems and in simplified trait‐based models. Higher food intake in warmed conditions increased total fish biomass, catches, and mean body weight, but these effects were offset by the negative effects of warming on metabolism and mortality, which combined resulted in lower total biomasses and catches for most food webs. These effects were enhanced when warming increased metabolic rates more than food intake, and the outcomes were also sensitive to size dependency of temperature responses. Importantly, these general patterns were not uniform across all food webs—individual functional groups and fish species within food webs responded to warming in different ways depending on their position in the food web and its structure. Hence, caution is warranted when generalizing food web or species outcomes to warming because they are mediated by community interactions. Uncertainty related to temperature dependence and ecological interactions will impact food web projections and should be represented in climate change projections.
- Open Access
- 22 January 2024
- Published by Wiley
Detecting, attributing, and projecting global marine ecosystem and fisheries change: FishMIP 2.0
There is an urgent need for models that can robustly detect past and project future ecosystem changes and risks to the services that they provide to people. The Fisheries and Marine Ecosystem Model Intercomparison Project (FishMIP) was established to develop model ensembles for projecting long-term impacts of climate change on fisheries and marine ecosystems while informing policy at spatio-temporal scales relevant to the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP) framework. While contributing FishMIP models have improved over time, large uncertainties in projections remain, particularly in coastal and shelf seas where most of the world’s fisheries occur. Furthermore, previous FishMIP climate impact projections have mostly ignored fishing activity due to a lack of standardized historical and scenario-based human activity forcing and uneven capabilities to dynamically model fisheries across the FishMIP community. This, in addition to underrepresentation of coastal processes, has limited the ability to evaluate the FishMIP ensemble’s ability to adequately capture past states - a crucial step for building confidence in future projections. To address these issues, we have developed two parallel simulation experiments (FishMIP 2.0) on: 1) model evaluation and detection of past changes and 2) future scenarios and projections. Key advances include historical climate forcing, that captures oceanographic features not previously resolved, and standardized fishing forcing to systematically test fishing effects across models. FishMIP 2.0 is a key step towards a detection and attribution framework for marine ecosystem change at regional and global scales, and towards enhanced policy relevance through increased confidence in future ensemble projections.
- 22 January 2024
- Published by Wiley
Open AccessDetecting, attributing, and projecting global marine ecosystem and fisheries change: FishMIP 2.0
There is an urgent need for models that can robustly detect past and project future ecosystem changes and risks to the services that they provide to people. The Fisheries and Marine Ecosystem Model Intercomparison Project (FishMIP) was established to develop model ensembles for projecting long-term impacts of climate change on fisheries and marine ecosystems while informing policy at spatio-temporal scales relevant to the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP) framework. While contributing FishMIP models have improved over time, large uncertainties in projections remain, particularly in coastal and shelf seas where most of the world’s fisheries occur. Furthermore, previous FishMIP climate impact projections have mostly ignored fishing activity due to a lack of standardized historical and scenario-based human activity forcing and uneven capabilities to dynamically model fisheries across the FishMIP community. This, in addition to underrepresentation of coastal processes, has limited the ability to evaluate the FishMIP ensemble’s ability to adequately capture past states - a crucial step for building confidence in future projections. To address these issues, we have developed two parallel simulation experiments (FishMIP 2.0) on: 1) model evaluation and detection of past changes and 2) future scenarios and projections. Key advances include historical climate forcing, that captures oceanographic features not previously resolved, and standardized fishing forcing to systematically test fishing effects across models. FishMIP 2.0 is a key step towards a detection and attribution framework for marine ecosystem change at regional and global scales, and towards enhanced policy relevance through increased confidence in future ensemble projections.
- Open Access
- 1 January 2023
- Published by The Oceanography Society in Oceanography
- Vol. 36 (4) , 68-69
Creating Pathways for Nontraditional Graduate Students
As past and present nontraditional students, our group of authors experienced firsthand a range of hurdles in our pursuit of ocean science graduate studies. Some of us attended graduate school while working full time in our fields as a means to advance our careers. Others returned to graduate school to pursue a second career in a new field. Combining our experiences with broader demographic information (Wendler et al., 2010) led us to define nontraditional ocean science graduate students as any of the following: mid-career professionals pursuing graduate degrees for career advancement and those who are embarking on a second career, hold an undergraduate degree outside of STEM, are in their thirties or older, or are balancing school with work and/or family responsibilities. While we highlight these characteristics, we recognize that there are others who self-identify as nontraditional, such as those facing a serious medical condition or disability. We hope that by sharing ways to remove barriers to entry, retention, and advancement for nontraditional students, our field will become more inclusive, equitable, and diverse.
- 1 January 2023
- Published by The Oceanography Society in Oceanography
- Vol. 36 (4) , 68-69
Open AccessCreating Pathways for Nontraditional Graduate Students
As past and present nontraditional students, our group of authors experienced firsthand a range of hurdles in our pursuit of ocean science graduate studies. Some of us attended graduate school while working full time in our fields as a means to advance our careers. Others returned to graduate school to pursue a second career in a new field. Combining our experiences with broader demographic information (Wendler et al., 2010) led us to define nontraditional ocean science graduate students as any of the following: mid-career professionals pursuing graduate degrees for career advancement and those who are embarking on a second career, hold an undergraduate degree outside of STEM, are in their thirties or older, or are balancing school with work and/or family responsibilities. While we highlight these characteristics, we recognize that there are others who self-identify as nontraditional, such as those facing a serious medical condition or disability. We hope that by sharing ways to remove barriers to entry, retention, and advancement for nontraditional students, our field will become more inclusive, equitable, and diverse.
- Top Cited Papers
- 7 September 2022
- Published by Springer Nature in Nature
- Vol. 609 (7927) , 535-540
Anticyclonic eddies aggregate pelagic predators in a subtropical gyre
Ocean eddies are coherent, rotating features that can modulate pelagic ecosystems across many trophic levels. These mesoscale features, which are ubiquitous at mid-latitudes1, may increase productivity of nutrient-poor regions2,3, accumulate prey4 and modulate habitat conditions in the water column5. However, in nutrient-poor subtropical gyres—the largest marine biome—the role of eddies in modulating behaviour throughout the pelagic predator community remains unknown despite predictions for these gyres to expand6 and pelagic predators to become increasingly important for food security7. Using a large-scale fishery dataset in the North Pacific Subtropical Gyre, we show a pervasive pattern of increased pelagic predator catch inside anticyclonic eddies relative to cyclones and non-eddy areas. Our results indicate that increased mesopelagic prey abundance in anticyclone cores4,8 may be attracting diverse predators, forming ecological hotspots where these predators aggregate and exhibit increased abundance. In this energetically quiescent gyre, we expect that isolated mesoscale features (and the habitat conditions in them) exhibit primacy over peripheral submesoscale dynamics in structuring the foraging opportunities of pelagic predators. Our finding that eddies influence coupling of epi- to mesopelagic communities corroborates the growing evidence that deep scattering layer organisms are vital prey for a suite of commercially important predator species9 and, thus, provide valuable ecosystem services.
- 7 September 2022
- Published by Springer Nature in Nature
- Vol. 609 (7927) , 535-540
Top Cited PapersAnticyclonic eddies aggregate pelagic predators in a subtropical gyre
Ocean eddies are coherent, rotating features that can modulate pelagic ecosystems across many trophic levels. These mesoscale features, which are ubiquitous at mid-latitudes1, may increase productivity of nutrient-poor regions2,3, accumulate prey4 and modulate habitat conditions in the water column5. However, in nutrient-poor subtropical gyres—the largest marine biome—the role of eddies in modulating behaviour throughout the pelagic predator community remains unknown despite predictions for these gyres to expand6 and pelagic predators to become increasingly important for food security7. Using a large-scale fishery dataset in the North Pacific Subtropical Gyre, we show a pervasive pattern of increased pelagic predator catch inside anticyclonic eddies relative to cyclones and non-eddy areas. Our results indicate that increased mesopelagic prey abundance in anticyclone cores4,8 may be attracting diverse predators, forming ecological hotspots where these predators aggregate and exhibit increased abundance. In this energetically quiescent gyre, we expect that isolated mesoscale features (and the habitat conditions in them) exhibit primacy over peripheral submesoscale dynamics in structuring the foraging opportunities of pelagic predators. Our finding that eddies influence coupling of epi- to mesopelagic communities corroborates the growing evidence that deep scattering layer organisms are vital prey for a suite of commercially important predator species9 and, thus, provide valuable ecosystem services.