Yiming Zhang
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Yiming Zhang has a total of 10 co-authors. Here are the top co-authors by number of shared publications:
- Cong-Sheng Li
Hebei Key Laboratory of Animal Diversity, Langfang Normal University, Langfang 065000, China
1 shared publication - Donghui Wu
Key Laboratory of Wetland Ecology and Environment, State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China
1 shared publication - Hui Wu
Faculty of Biology, No.10 Middle School, Langfang 065000, China
1 shared publication - Junfei Guo
Guangdong Women and Children Hospital
1 shared publication - Mingxing Chu
State Key Laboratory of Animal Biotech Breeding, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
1 shared publication - Nonillon M. Aspe
College of Environment and Life Sciences, Mindanao State University at Naawan, Naawan, Philippines
1 shared publication
Latest Publications
- Open Access
Patterns of Genetic Variation in the Eisenia nordenskioldi Complex (Oligochaeta: Lumbricidae) along an Elevation Gradient in Northern China
Eisenia nordenskioldi is the dominant earthworm species in many tundra and boreal habitats. Nothing is known about the genetic diversity of this species along the elevation gradient in China. This study sampled 28 individuals in the E. nordenskioldi complex from Wuling Mountain, northern China, to examine their external morphology and genetic diversity. Mt. Wuling is the southern limit of the distribution of the E. nordenskioldi complex. The specimens from Mt. Wuling were classified into three groups along an elevation gradient. Mismatch distribution analysis suggested that the Pleistocene glaciations possibly did not significantly affect the distribution of earthworm species in this region. We also found that elevation affected the genetic diversity, but not the external morphology of E. nordenskioldi. Given the altitudinal genetic diversity within the E. nordenskioldi complex, the phylogeography of this species provides important information for the zoogeographic reconstruction of the mountains in northern China. With the relatively limited sample size, the result is not conclusive, and further studies need to be conducted in the future to verify the results.
Open AccessPatterns of Genetic Variation in the Eisenia nordenskioldi Complex (Oligochaeta: Lumbricidae) along an Elevation Gradient in Northern China
Eisenia nordenskioldi is the dominant earthworm species in many tundra and boreal habitats. Nothing is known about the genetic diversity of this species along the elevation gradient in China. This study sampled 28 individuals in the E. nordenskioldi complex from Wuling Mountain, northern China, to examine their external morphology and genetic diversity. Mt. Wuling is the southern limit of the distribution of the E. nordenskioldi complex. The specimens from Mt. Wuling were classified into three groups along an elevation gradient. Mismatch distribution analysis suggested that the Pleistocene glaciations possibly did not significantly affect the distribution of earthworm species in this region. We also found that elevation affected the genetic diversity, but not the external morphology of E. nordenskioldi. Given the altitudinal genetic diversity within the E. nordenskioldi complex, the phylogeography of this species provides important information for the zoogeographic reconstruction of the mountains in northern China. With the relatively limited sample size, the result is not conclusive, and further studies need to be conducted in the future to verify the results.
- Open Access
- 19 August 2020
- Published by Springer Nature in Research Square
Genome-Wide Identification and Functional Prediction of Circular RNAs in Response to Heat Stress in Chinese Holstein Cows
Background: Heat stress (HS) leads to substantial economic loss of dairy industry each year. The negative effect of HS in dairy cows is becoming one of the more urgent and important issue due to accelerating side-effects of global warming. At present, the best way to alleviate the effect of HS is breeding of thermotolerant cows which depends on the profound understanding of mechanism of HS. Various genes are involved in HS response but the information about the role of noncoding RNAs, especially circular RNAs (circRNAs) is largely unknown.Results: In our study, we aimed to investigate the different expression profile of circRNAs between HS and normal condition (NC) of Chinese Holstein cow’s mammary gland. CircRNAs were identified using RNA sequencing and bioinformatics analysis. In total, 37405 circRNAs were detected and 95 were differentially expressed (DE), including 15 downregulated and 80 upregulated circRNAs in HS group compared to NC. Eight circRNAs were randomly selected to verify the RNA sequencing result. Further, Sanger sequencing validated the backsplicing site of the eight circRNAs. Moreover, results obtained from the Quantitative real time PCR (qRT-PCR) showed consistent expression trend with that of RNA sequencing. GO annotation and KEGG analysis suggested that these DE circRNAs probably involved in the energy metabolic regulation. Furthermore, we constructed ceRNA network and the result indicated that these DE circRNAs could regulate lactation through IGF1 and PRL signaling pathway.Conclusion: During our study, it was evident that circRNAs were involved in regulation of HS response in Chinese Holstein cow’s mammary gland. This will help researchers to achieve a better understanding of mechanism related to HS response and can provide new insights in breeding of thermotolerant dairy cows.
- 19 August 2020
- Published by Springer Nature in Research Square
Open AccessGenome-Wide Identification and Functional Prediction of Circular RNAs in Response to Heat Stress in Chinese Holstein Cows
Background: Heat stress (HS) leads to substantial economic loss of dairy industry each year. The negative effect of HS in dairy cows is becoming one of the more urgent and important issue due to accelerating side-effects of global warming. At present, the best way to alleviate the effect of HS is breeding of thermotolerant cows which depends on the profound understanding of mechanism of HS. Various genes are involved in HS response but the information about the role of noncoding RNAs, especially circular RNAs (circRNAs) is largely unknown.Results: In our study, we aimed to investigate the different expression profile of circRNAs between HS and normal condition (NC) of Chinese Holstein cow’s mammary gland. CircRNAs were identified using RNA sequencing and bioinformatics analysis. In total, 37405 circRNAs were detected and 95 were differentially expressed (DE), including 15 downregulated and 80 upregulated circRNAs in HS group compared to NC. Eight circRNAs were randomly selected to verify the RNA sequencing result. Further, Sanger sequencing validated the backsplicing site of the eight circRNAs. Moreover, results obtained from the Quantitative real time PCR (qRT-PCR) showed consistent expression trend with that of RNA sequencing. GO annotation and KEGG analysis suggested that these DE circRNAs probably involved in the energy metabolic regulation. Furthermore, we constructed ceRNA network and the result indicated that these DE circRNAs could regulate lactation through IGF1 and PRL signaling pathway.Conclusion: During our study, it was evident that circRNAs were involved in regulation of HS response in Chinese Holstein cow’s mammary gland. This will help researchers to achieve a better understanding of mechanism related to HS response and can provide new insights in breeding of thermotolerant dairy cows.