Sandra Raquel Reyes-Carmona

The c-Myc oncoprotein is a central regulator of oncogenic transcriptional programs that remains challenging to inhibit directly, necessitating strategies that target c-Myc–associated protein complexes rather than the protein alone. This study conducted an in silico evaluation of the natural biphenolic lignan pinoresinol as a potential modulator of the c-Myc–TBP–TAF1 (TATA-binding protein (TBP)- Multiple direct interactions of TBP with the MYC oncoprotein) transcriptional complex (PDB ID: 6E16). Prior to molecular docking, the protein structure was subjected to energy minimization using the AMBER ff14SB force field to optimize conformational stability and structural reliability; ligand preparation and docking were performed with standard, widely used tools (e.g., AutoDock Vina v1.1.2; visualization and interface analyses in UCSF Chimera/ChimeraX and SeamDock). Molecular docking and binding-interface analyses identified reproducible interactions within defined pockets P₀, P₁, and P₂, with pocket P₀ exhibiting the highest Drug Score of 0.82. Binding affinities ranged from −5.0 to −7.1 kcal/mol, which are consistent with moderate docking scores typical for small natural ligands. Across multiple ligand poses, LYS327, LYS310, and ASP209 emerged as consistent interaction hotspots, with LYS327 showing the most frequent contacts. Furthermore, in silico ADMET analysis predicted a high probability of cytotoxic inactivity (0.98), suggesting a favorable safety profile compared to traditional agents like vincristine. These results support a protein–protein interface-oriented approach and position pinoresinol as a promising lead scaffold for disrupting c-Myc–associated transcriptional regulation.

The genus Quercus (Fagaceae) is one of the most widely distributed and species-diverse trees in the Northern Hemisphere. The present study addresses the investigation of the phyto-chemical profile by ten assays, the antioxidant activity scavenging of DPPH radicals, total phenolic content, total flavonoids, and antimicrobial activity against three pathogenic bacteria with the foliage of two species of red oak (Quercus sartorii and Quercus rysophylla). Both species of oak showed a high phenolic content in the aqueous extract (22,342.10 ± 3076.5 mg GAE/kg of plant and 17,747.14 ± 1139.9 mg GAE/kg of plant, respectively). In the flavonoid content, Q. sartorii showed a higher amount in the ethanolic extract (24,587.42 ± 996.3 mg QE/kg of plant), while for Q. rysophylla, it was methanolic extract (19,875.66 ± 2754.01 QE/kg of plant). In the DPPH radical scavenging activity, Q. sartorii showed the highest percentage of inhibition in the methanolic extract (81.14 ± 1.7%), while in Q. rysophylla, it was the ethanolic extract (82.60 ± 2.7%). In the antimicrobial tests, inhibition halos were obtained in the strains Acinetobacter baumannii and Staphylococcus aureus of both species. All this gives a guideline to comprehensively elucidate the metabolites present in these two species for further study and application in the dispute against pathogenic bacteria or in diseases related to the imbalance of reactive oxygen species (ROS).

El proyecto de “Jardín sensorial inclusión y bienestar para todos de la mano de la BUAP (VIEP-BUAP 2024:24073 Bioinformática inclusiva). Tiene como objetivo diseñar un símbolo de identidad, que además de englobar el mensaje de respeto hacia nuestro medio ambiente, también abrace e invite a las personas de baja visión y/o ciegas a interactuar en este jardín. Para lograr este objetivo se emplearon softwares de diseño y de dibujo, además se realizó una revisión en la literatura científica para identificar los colores que se han asociado a las emociones universales, enraizadas en el pensamiento humano; de los cuales se buscaron los más apropiados para transmitir el mensaje de forma efectiva en todos los elementos gráficos que conforman la identidad visual. A partir de esta investigación se desarrolló el proceso creativo que constó de la edición del isologo y la justificación de la implementación de cada uno de los elementos que lo conforman. Finalmente se presenta el isologo en dos trípticos y una infografía digital que divulgan la importancia y utilidad del compostaje, así como el proceso para realizar figuras de yeso, las cuales pueden ser incorporadas a los jardines para que la planta obtenga una fuente de calcio permanente.

Aldehyde dehydrogenases (ALDHs) are indispensable enzymes that play a pivotal role in mitigating aldehyde toxicity by converting them into less reactive compounds. Despite the availability of fully sequenced Azospirillum genomes in public databases, a comprehensive analysis of the ALDH superfamily within these genomes has yet to be undertaken. This study presents the identification and classification of 17 families and 31 subfamilies of ALDHs in fully assembled Azospirillum genomes. This classification system framework provides a more comprehensive understanding of the diversity and redundancy of ALDHs across bacterial genomes, which can aid in elucidating the distinct characteristics and functions of each family. The study also proposes the adoption of the ALDH19 family as a powerful phylogenetic marker due to its remarkable conservation and non-redundancy across various Azospirillum species. The diversity of ALDHs among different strains of Azospirillum can influence their adaptation and survival under various environmental conditions. The findings of this study could potentially be used to improve agricultural production by enhancing the growth and productivity of crops. Azospirillum bacteria establish a mutualistic relationship with plants and can promote plant growth by producing phytohormones such as indole-3-acetic acid (IAA). The diversity of ALDHs in Azospirillum can affect their ability to produce IAA and other beneficial compounds that promote plant growth and can be used as biofertilizers to enhance agricultural productivity.

Galectin‐9 levels have been reported to be altered in several cancer types, but the mechanism that regulates the expression of Galectin‐9 has not been clarified. Galectin‐9 is encoded by the LGALS9 gene, which gives rise to eight mRNA variants. The aims of this study were: (a) to identify the mRNA variants of LGALS9, (b) to characterize CpG methylation and H3K9 and H3K14 histone acetylation at the promoter of the LGALS9 gene, and (c) to characterize the relationship between these modifications and LGALS9 expression level in cervical cancer cells. All mRNA variants were detected in HaCaT (nontumoural keratinocytes) and SiHa cells, and seven were observed in HeLa cells. The promoter region of LGALS9 contains eight CpG dinucleotides. No hypermethylation pattern related to low LGALS9 expression was identified in tumour cells. Chromatin immunoprecipitation analysis demonstrated higher acetylation of H3K9ac and H3K14ac in HaCaT cells, which was related to higher mRNA levels. The presence of the mRNA variants suggests that alternative splicing may regulate the expression of galectin‐9 isoforms. The results of this study suggest that histone acetylation, but not promoter CpG methylation, may be involved in the transcriptional regulation of the LGALS9 gene.