Paulina Stasica
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Paulina Stasica has a total of 85 co-authors. Here are the top co-authors by number of shared publications:
- Jan Gajewski
Institute of Nuclear Physics PAN, Kraków, Poland
9 shared publications - Antoni Rucinski
Institute of Nuclear Physics PAS, Radzikowskiego 152, Krakow, 31-342, POLAND
8 shared publications - Renata Kopeć
Institute of Nuclear Physics Polish Academy of Science, Radzikowskiego 152, Krakow, 31-342, POLAND
6 shared publications - Carlos Granja
VSB - Technical University of Ostrava, Faculty of Electrical Engineering and Computer Science, 17. listopadu 2172/15, 708 00 Ostrava, Czech Republic; Advacam, U Pergamenky 12, 170 00 Prague, Czech Republic
4 shared publications - Marzena Rydygier
Institute of Nuclear Physics Polish Academy of Sciences, Krakow, Poland
4 shared publications - Damian Borys
Department of Systems Biology and Engineering, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, Gliwice, Poland; Biotechnology Centre, Silesian University of Technology, Gliwice, Poland
3 shared publications
Latest Publications
- Open Access
- 3 September 2025
- Published by Elsevier in Physica Medica
- Vol. 138, 105085
Supporting patient-specific quality assurance with fast Monte Carlo at CCB proton therapy center
- 3 September 2025
- Published by Elsevier in Physica Medica
- Vol. 138, 105085
Open AccessSupporting patient-specific quality assurance with fast Monte Carlo at CCB proton therapy center
- Open Access
- 29 July 2025
- Published by Elsevier in Computers in Biology and Medicine
- Vol. 196 (Pt B) , 110802
LET spectra scoring for applications in proton radiotherapy
- 29 July 2025
- Published by Elsevier in Computers in Biology and Medicine
- Vol. 196 (Pt B) , 110802
Open AccessLET spectra scoring for applications in proton radiotherapy
- Open Access
- 29 April 2025
- Published by IOP Publishing in Physics in Medicine & Biology
- Vol. 70 (9) , 095007
Experimental validation of LET in intensity-modulated proton therapy with a miniaturized pixel detector
Objective. Given the increased interest in incorporating linear energy transfer (LET) as an optimization parameter in intensity-modulated proton therapy (IMPT), a solution for experimental validation of simulations and patient-specific quality assurance (PSQA) in terms of proton LET is needed. Here, we present the methodology and results of LET spectra measurements for spread-out Bragg peak (SOBP) and IMPT plans using a miniaturized pixel detector Timepix3. Approach. We used a MiniPIX Timepix3 detector that provides single-particle tracking, type-resolving power, and spectral information while allowing measurement in quasi-continuous mode. We performed measurements for SOBP and IMPT plans in homogeneous RW3 and heterogeneous CIRS head phantoms with reduced beam current. An artificial intelligence-based model was applied for proton identification and a GPU-accelerated FRED Monte Carlo (MC) code was applied for corresponding MC simulations. Main results. We compared the deposited energy and LET spectra obtained in mixed radiation fields from measurements and MC simulations. The peak positions of deposited energy and LET spectra for the SOBP and IMPT plans agree within the error bars. Discrepancies exceeding the error bars are only visible in the logarithmic scale in high-energy deposition and high-LET tails of the distributions. The mean relative difference of dose-averaged LET values between measurements and MC simulations for individual energy layers is about 5.1%. Significance. This study presents a methodology for assessing radiation quality in proton therapy through energy deposition and LET spectra measurements in uniform and clinical IMPT fields. Findings show an agreement between experimental data and MC simulations, validating our approach. The presented results demonstrate the feasibility of a commercially available Timepix3 detector to validate LET computations in IMPT fields and perform PSQA in terms of LET. This will support the implementation of LET in treatment planning, which will ultimately increase the effectiveness of the treatment.
- 29 April 2025
- Published by IOP Publishing in Physics in Medicine & Biology
- Vol. 70 (9) , 095007
Open AccessExperimental validation of LET in intensity-modulated proton therapy with a miniaturized pixel detector
Objective. Given the increased interest in incorporating linear energy transfer (LET) as an optimization parameter in intensity-modulated proton therapy (IMPT), a solution for experimental validation of simulations and patient-specific quality assurance (PSQA) in terms of proton LET is needed. Here, we present the methodology and results of LET spectra measurements for spread-out Bragg peak (SOBP) and IMPT plans using a miniaturized pixel detector Timepix3. Approach. We used a MiniPIX Timepix3 detector that provides single-particle tracking, type-resolving power, and spectral information while allowing measurement in quasi-continuous mode. We performed measurements for SOBP and IMPT plans in homogeneous RW3 and heterogeneous CIRS head phantoms with reduced beam current. An artificial intelligence-based model was applied for proton identification and a GPU-accelerated FRED Monte Carlo (MC) code was applied for corresponding MC simulations. Main results. We compared the deposited energy and LET spectra obtained in mixed radiation fields from measurements and MC simulations. The peak positions of deposited energy and LET spectra for the SOBP and IMPT plans agree within the error bars. Discrepancies exceeding the error bars are only visible in the logarithmic scale in high-energy deposition and high-LET tails of the distributions. The mean relative difference of dose-averaged LET values between measurements and MC simulations for individual energy layers is about 5.1%. Significance. This study presents a methodology for assessing radiation quality in proton therapy through energy deposition and LET spectra measurements in uniform and clinical IMPT fields. Findings show an agreement between experimental data and MC simulations, validating our approach. The presented results demonstrate the feasibility of a commercially available Timepix3 detector to validate LET computations in IMPT fields and perform PSQA in terms of LET. This will support the implementation of LET in treatment planning, which will ultimately increase the effectiveness of the treatment.
- Open Access
- 17 January 2025
- Published by Elsevier in Physica Medica
- Vol. 130, 104885
Configuration of Timepix3 read-out parameters for spectral measurements in proton therapy applications
- 17 January 2025
- Published by Elsevier in Physica Medica
- Vol. 130, 104885
Open AccessConfiguration of Timepix3 read-out parameters for spectral measurements in proton therapy applications
- 26 February 2024
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Nuclear Science
- Vol. 71 (4) , 921-931
Composition and Spectral Characterization of Mixed-Radiation Fields With Enhanced Discrimination by Quantum Imaging Detection
Mixed radiation fields in environments such as particle radiotherapy and outer space exhibit large complexity in terms of composition and spectral distribution which are difficult to measure in detail. For this purpose, we present a high-sensitivity technique using the pixel detector Timepix3 to measure the composition and spectral-tracking characterization of secondary fields produced in proton radiotherapy. Particle-event classes are resolved into broad groups of high-energy transfer particles (HETP), such as protons, ions and neutrons, as well as low-energy transfer particles (LETP), such as electrons, X rays and, partly, low-energy gamma rays. The quantum-imaging capability of Timepix3 is exploited to enhance the resolving power for particle-type classification. The particle tracks are analyzed by spectral-sensitive pattern recognition algorithms. The response matrix for Timepix3 is newly derived and is based from experimental calibrations in well-defined radiation fields including in-beam rotational scans of protons performed at various energies and directions. Clinical proton beams of radiotherapeutic intensities and energies in the range 225 – 12 MeV were used in experimental configurations with and without a tissue-equivalent phantom. Detailed results of radiation components can be used to produce total and partial particle fluxes, dose rate, absorbed dose, deposited energy and linear-energy-transfer (LET) spectra. Dedicated Monte Carlo (MC) simulations are compared with experimental results of field composition, particle fluence, and deposited energy. The numerical information aids the interpretation of experimental data which includes also secondary neutrons. The technique and developed methodology can be applied for research and routine measurements in environments of varying complexity.
- 26 February 2024
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Nuclear Science
- Vol. 71 (4) , 921-931
Composition and Spectral Characterization of Mixed-Radiation Fields With Enhanced Discrimination by Quantum Imaging Detection
Mixed radiation fields in environments such as particle radiotherapy and outer space exhibit large complexity in terms of composition and spectral distribution which are difficult to measure in detail. For this purpose, we present a high-sensitivity technique using the pixel detector Timepix3 to measure the composition and spectral-tracking characterization of secondary fields produced in proton radiotherapy. Particle-event classes are resolved into broad groups of high-energy transfer particles (HETP), such as protons, ions and neutrons, as well as low-energy transfer particles (LETP), such as electrons, X rays and, partly, low-energy gamma rays. The quantum-imaging capability of Timepix3 is exploited to enhance the resolving power for particle-type classification. The particle tracks are analyzed by spectral-sensitive pattern recognition algorithms. The response matrix for Timepix3 is newly derived and is based from experimental calibrations in well-defined radiation fields including in-beam rotational scans of protons performed at various energies and directions. Clinical proton beams of radiotherapeutic intensities and energies in the range 225 – 12 MeV were used in experimental configurations with and without a tissue-equivalent phantom. Detailed results of radiation components can be used to produce total and partial particle fluxes, dose rate, absorbed dose, deposited energy and linear-energy-transfer (LET) spectra. Dedicated Monte Carlo (MC) simulations are compared with experimental results of field composition, particle fluence, and deposited energy. The numerical information aids the interpretation of experimental data which includes also secondary neutrons. The technique and developed methodology can be applied for research and routine measurements in environments of varying complexity.
- Open Access
- 12 July 2023
- Published by IOP Publishing in Physics in Medicine & Biology
- Vol. 68 (14) , 145016
Detection of range shifts in proton beam therapy using the J-PET scanner: a patient simulation study
Objective. The Jagiellonian positron emission tomography (J-PET) technology, based on plastic scintillators, has been proposed as a cost effective tool for detecting range deviations during proton therapy. This study investigates the feasibility of using J-PET for range monitoring by means of a detailed Monte Carlo simulation study of 95 patients who underwent proton therapy at the Cyclotron Centre Bronowice (CCB) in Krakow, Poland. Approach. Discrepancies between prescribed and delivered treatments were artificially introduced in the simulations by means of shifts in patient positioning and in the Hounsfield unit to the relative proton stopping power calibration curve. A dual-layer, cylindrical J-PET geometry was simulated in an in-room monitoring scenario and a triple-layer, dual-head geometry in an in-beam protocol. The distribution of range shifts in reconstructed PET activity was visualized in the beam’s eye view. Linear prediction models were constructed from all patients in the cohort, using the mean shift in reconstructed PET activity as a predictor of the mean proton range deviation. Main results. Maps of deviations in the range of reconstructed PET distributions showed agreement with those of deviations in dose range in most patients. The linear prediction model showed a good fit, with coefficient of determination r 2 = 0.84 (in-room) and 0.75 (in-beam). Residual standard error was below 1 mm: 0.33 mm (in-room) and 0.23 mm (in-beam). Significance. The precision of the proposed prediction models shows the sensitivity of the proposed J-PET scanners to shifts in proton range for a wide range of clinical treatment plans. Furthermore, it motivates the use of such models as a tool for predicting proton range deviations and opens up new prospects for investigations into the use of intra-treatment PET images for predicting clinical metrics that aid in the assessment of the quality of delivered treatment.
- 12 July 2023
- Published by IOP Publishing in Physics in Medicine & Biology
- Vol. 68 (14) , 145016
Open AccessDetection of range shifts in proton beam therapy using the J-PET scanner: a patient simulation study
Objective. The Jagiellonian positron emission tomography (J-PET) technology, based on plastic scintillators, has been proposed as a cost effective tool for detecting range deviations during proton therapy. This study investigates the feasibility of using J-PET for range monitoring by means of a detailed Monte Carlo simulation study of 95 patients who underwent proton therapy at the Cyclotron Centre Bronowice (CCB) in Krakow, Poland. Approach. Discrepancies between prescribed and delivered treatments were artificially introduced in the simulations by means of shifts in patient positioning and in the Hounsfield unit to the relative proton stopping power calibration curve. A dual-layer, cylindrical J-PET geometry was simulated in an in-room monitoring scenario and a triple-layer, dual-head geometry in an in-beam protocol. The distribution of range shifts in reconstructed PET activity was visualized in the beam’s eye view. Linear prediction models were constructed from all patients in the cohort, using the mean shift in reconstructed PET activity as a predictor of the mean proton range deviation. Main results. Maps of deviations in the range of reconstructed PET distributions showed agreement with those of deviations in dose range in most patients. The linear prediction model showed a good fit, with coefficient of determination r 2 = 0.84 (in-room) and 0.75 (in-beam). Residual standard error was below 1 mm: 0.33 mm (in-room) and 0.23 mm (in-beam). Significance. The precision of the proposed prediction models shows the sensitivity of the proposed J-PET scanners to shifts in proton range for a wide range of clinical treatment plans. Furthermore, it motivates the use of such models as a tool for predicting proton range deviations and opens up new prospects for investigations into the use of intra-treatment PET images for predicting clinical metrics that aid in the assessment of the quality of delivered treatment.
- Open Access
- 8 May 2023
- Published by IOP Publishing in Physics in Medicine & Biology
- Vol. 68 (10) , 104001
Single proton LET characterization with the Timepix detector and artificial intelligence for advanced proton therapy treatment planning
Objective. Protons have advantageous dose distributions and are increasingly used in cancer therapy. At the depth of the Bragg peak range, protons produce a mixed radiation field consisting of low- and high-linear energy transfer (LET) components, the latter of which is characterized by an increased ionization density on the microscopic scale associated with increased biological effectiveness. Prediction of the yield and LET of primary and secondary charged particles at a certain depth in the patient is performed by Monte Carlo simulations but is difficult to verify experimentally. Approach. Here, the results of measurements performed with Timepix detector in the mixed radiation field produced by a therapeutic proton beam in water are presented and compared to Monte Carlo simulations. The unique capability of the detector to perform high-resolution single particle tracking and identification enhanced by artificial intelligence allowed to resolve the particle type and measure the deposited energy of each particle comprising the mixed radiation field. Based on the collected data, biologically important physics parameters, the LET of single protons and dose-averaged LET, were computed. Main results. An accuracy over 95% was achieved for proton recognition with a developed neural network model. For recognized protons, the measured LET spectra generally agree with the results of Monte Carlo simulations. The mean difference between dose-averaged LET values obtained from measurements and simulations is 17%. We observed a broad spectrum of LET values ranging from a fraction of keV μm−1 to about 10 keV μm−1 for most of the measurements performed in the mixed radiation fields. Significance. It has been demonstrated that the introduced measurement method provides experimental data for validation of LETD or LET spectra in any treatment planning system. The simplicity and accessibility of the presented methodology make it easy to be translated into a clinical routine in any proton therapy facility.
- 8 May 2023
- Published by IOP Publishing in Physics in Medicine & Biology
- Vol. 68 (10) , 104001
Open AccessSingle proton LET characterization with the Timepix detector and artificial intelligence for advanced proton therapy treatment planning
Objective. Protons have advantageous dose distributions and are increasingly used in cancer therapy. At the depth of the Bragg peak range, protons produce a mixed radiation field consisting of low- and high-linear energy transfer (LET) components, the latter of which is characterized by an increased ionization density on the microscopic scale associated with increased biological effectiveness. Prediction of the yield and LET of primary and secondary charged particles at a certain depth in the patient is performed by Monte Carlo simulations but is difficult to verify experimentally. Approach. Here, the results of measurements performed with Timepix detector in the mixed radiation field produced by a therapeutic proton beam in water are presented and compared to Monte Carlo simulations. The unique capability of the detector to perform high-resolution single particle tracking and identification enhanced by artificial intelligence allowed to resolve the particle type and measure the deposited energy of each particle comprising the mixed radiation field. Based on the collected data, biologically important physics parameters, the LET of single protons and dose-averaged LET, were computed. Main results. An accuracy over 95% was achieved for proton recognition with a developed neural network model. For recognized protons, the measured LET spectra generally agree with the results of Monte Carlo simulations. The mean difference between dose-averaged LET values obtained from measurements and simulations is 17%. We observed a broad spectrum of LET values ranging from a fraction of keV μm−1 to about 10 keV μm−1 for most of the measurements performed in the mixed radiation fields. Significance. It has been demonstrated that the introduced measurement method provides experimental data for validation of LETD or LET spectra in any treatment planning system. The simplicity and accessibility of the presented methodology make it easy to be translated into a clinical routine in any proton therapy facility.
- Open Access
- 11 November 2022
- Published by IOP Publishing in Physics in Medicine & Biology
- Vol. 67 (22) , 224002
ProTheRaMon —a GATE simulation framework for proton therapy range monitoring using PET imaging
Objective. This paper reports on the implementation and shows examples of the use of the ProTheRaMon framework for simulating the delivery of proton therapy treatment plans and range monitoring using positron emission tomography (PET). ProTheRaMon offers complete processing of proton therapy treatment plans, patient CT geometries, and intra-treatment PET imaging, taking into account therapy and imaging coordinate systems and activity decay during the PET imaging protocol specific to a given proton therapy facility. We present the ProTheRaMon framework and illustrate its potential use case and data processing steps for a patient treated at the Cyclotron Centre Bronowice (CCB) proton therapy center in Krakow, Poland. Approach. The ProTheRaMon framework is based on GATE Monte Carlo software, the CASToR reconstruction package and in-house developed Python and bash scripts. The framework consists of five separated simulation and data processing steps, that can be further optimized according to the user’s needs and specific settings of a given proton therapy facility and PET scanner design. Main results. ProTheRaMon is presented using example data from a patient treated at CCB and the J-PET scanner to demonstrate the application of the framework for proton therapy range monitoring. The output of each simulation and data processing stage is described and visualized. Significance. We demonstrate that the ProTheRaMon simulation platform is a high-performance tool, capable of running on a computational cluster and suitable for multi-parameter studies, with databases consisting of large number of patients, as well as different PET scanner geometries and settings for range monitoring in a clinical environment. Due to its modular structure, the ProTheRaMon framework can be adjusted for different proton therapy centers and/or different PET detector geometries. It is available to the community via github (Borys et al 2022).
- 11 November 2022
- Published by IOP Publishing in Physics in Medicine & Biology
- Vol. 67 (22) , 224002
Open AccessProTheRaMon —a GATE simulation framework for proton therapy range monitoring using PET imaging
Objective. This paper reports on the implementation and shows examples of the use of the ProTheRaMon framework for simulating the delivery of proton therapy treatment plans and range monitoring using positron emission tomography (PET). ProTheRaMon offers complete processing of proton therapy treatment plans, patient CT geometries, and intra-treatment PET imaging, taking into account therapy and imaging coordinate systems and activity decay during the PET imaging protocol specific to a given proton therapy facility. We present the ProTheRaMon framework and illustrate its potential use case and data processing steps for a patient treated at the Cyclotron Centre Bronowice (CCB) proton therapy center in Krakow, Poland. Approach. The ProTheRaMon framework is based on GATE Monte Carlo software, the CASToR reconstruction package and in-house developed Python and bash scripts. The framework consists of five separated simulation and data processing steps, that can be further optimized according to the user’s needs and specific settings of a given proton therapy facility and PET scanner design. Main results. ProTheRaMon is presented using example data from a patient treated at CCB and the J-PET scanner to demonstrate the application of the framework for proton therapy range monitoring. The output of each simulation and data processing stage is described and visualized. Significance. We demonstrate that the ProTheRaMon simulation platform is a high-performance tool, capable of running on a computational cluster and suitable for multi-parameter studies, with databases consisting of large number of patients, as well as different PET scanner geometries and settings for range monitoring in a clinical environment. Due to its modular structure, the ProTheRaMon framework can be adjusted for different proton therapy centers and/or different PET detector geometries. It is available to the community via github (Borys et al 2022).