Fahad S. Alotaibi

Plant-derived natural products are essential and prominent contributors to drug discovery, especially as anticancer agents. Medicinal plants used in alternative therapy are often obscured by poor definitions of the underlying mechanisms behind their bioactivity. In this study, we investigated the cytotoxic and mechanistic effects of an enriched bioactive fraction derived from Mondia whitei. Bioactivity-guided fractionation was performed using C18 solid-phase extraction. The cytotoxic effects were evaluated using the MTT assay, while cellular morphology and mechanistic pathways were examined through microscopy, acridine orange staining, cathepsin-based assay, and immunoblotting of apoptosis- and autophagy-related proteins. Chemical profiling of the fraction was conducted using GC–MS analysis. The enriched fraction exhibited enhanced cytotoxicity at low microgram concentrations. Morphological assessment revealed prominent cytoplasmic vacuolation, while acridine orange staining indicated the accumulation of acidic vesicles. Cathepsin-based assays and immunoblot analysis of LC3-I/II confirmed lysosomal involvement and autophagy perturbation, whereas increased p62 levels suggested disruption of the autophagy–lysosome perturbation. In parallel, activation of intrinsic apoptosis was evidenced by the increased expression of caspase-9 and caspase-3. GC–MS profiling tentatively identified lupeol and cis-vaccenic acid as the major constituents of the fraction. The results from these studies demonstrate that the enriched fraction of Mondia whitei induced vacuolation-associated cytotoxicity through autophagy–lysosome perturbation and caspase-dependent apoptosis, providing mechanistic insight into its anticancer potential.

Credit risk evaluation has gained substantial attention within financial institutions, serving as a pivotal tool to predict borrower repayment behavior and provide precise credit risk estimations. Traditional credit risk approaches discarded rejected applicants and were built only on accepted applicants, which posed sample selection bias issue. Previous reject inference methods solved the bias issue by incorporating information of rejected applicants. However, these methods assumed that the accepted and rejected samples had identical dimensions. In practical financial scenarios, financial institutions often encounter situations where the dimensions of accepted samples were larger than those of the rejected samples. Therefore, the additional features in accepted samples might not be fully utilized in the previous reject inference. In this study, we proposed a discriminative dual stack sparse auto-encoder (DD-SSAE) reject inference method that was suitable for the real scenarios. The proposed DD-SSAE has the following characteristics: (1) rejected samples were filtered based on our selection mechanism; (2) a stack sparse auto-encoder (SSAE), within a self-taught learning framework, was carried out to incorporate information of the selected rejected samples into the common features of accepted samples; and (3) a data fusion module, consisting of another SSAE network and a data fusion layer, was introduced to combine extra features with common features for accepted samples. The proposed method was verified on a Chinese consumer dataset and the findings illustrated its superiority over four conventional credit scoring models and five previous reject inference models.

Currently, the control of rhizosphere selection on farms has been applied to achieve enhancements in phenotype, extending from improvements in single root characteristics to the dynamic nature of entire crop systems. Several specific signals, regulatory elements, and mechanisms that regulate the initiation, morphogenesis, and growth of new lateral or adventitious root species have been identified, but much more work remains. Today, phenotyping technology drives the development of root traits. Available models for simulation can support all phenotyping decisions (root trait improvement). The detection and use of markers for quantitative trait loci (QTLs) are effective for enhancing selection efficiency and increasing reproductive genetic gains. Furthermore, QTLs may help wheat breeders select the appropriate roots for efficient nutrient acquisition. Single-nucleotide polymorphisms (SNPs) or alignment of sequences can only be helpful when they are associated with phenotypic variation for root development and elongation. Here, we focus on major root development processes and detail important new insights recently generated regarding the wheat genome. The first part of this review paper discusses the root morphology, apical meristem, transcriptional control, auxin distribution, phenotyping of the root system, and simulation models. In the second part, the molecular genetics of the wheat root system, SNPs, TFs, and QTLs related to root development as well as genome editing (GE) techniques for the improvement of root traits in wheat are discussed. Finally, we address the effect of omics strategies on root biomass production and summarize existing knowledge of the main molecular mechanisms involved in wheat root development and elongation.

Wheat is the main staple food in the world, so it is the backbone of food security. Drought not only affects growth and development but also ultimately has a severe impact on the overall productivity of crop plants. Some bacteria are capable of producing exopolysaccharides (EPS) as a survival mechanism, along with other metabolites, which help them survive in stressful conditions. The present study was conducted with the aim of inducing drought stress tolerance in wheat through EPS-producing plant growth-promoting rhizobacteria (PGPR). In this regard, a series of laboratory bioassays were conducted with the aim to isolating, characterizing, and screening the EPS-producing PGPR capable of improving wheat growth under limited water conditions. Thirty rhizobacterial strains (LEW1–LEW30) were isolated from the rhizosphere of wheat. Ten isolates with EPS-producing ability were quantitatively tested for EPS production and IAA production ability. Four of the most efficient EPS-producing strains (LEW3, LEW9, LEW16, and LEW28) were evaluated for their drought tolerance ability along with quantitative production of EPS and IAA under polyethylene glycol (PEG-6000)-induced drought stress. The jar experiment was conducted under gnotobiotic conditions to examine the drought-tolerant wheat genotypes, and two wheat varieties (Johar-16, and Gold-16) were selected for further experiments. The selected varieties were inoculated with EPS-producing rhizobacterial strains and grown under control conditions at different stress levels (0, 2, 4, and 6% PEG-6000). The strain LEW16 showed better results for improving root morphology and seedling growth in both varieties. The maximum increase in germination, growth parameters, percentage, root diameter, root surface area, and root colonization was recorded in Johar-16 by inoculating LEW16 at 6% PEG-6000. Plant growth-promoting traits were tested on the top-performing strains (LEW3, LEW9, and LEW16). Through 16S rRNA sequencing, these strains were identified as Chryseobacterium sp. (LEW3), Acinetobacter sp. (LEW9), and Klebsiella sp. (LEW16), and they showed positive results for phosphorous and zinc solubilization as well as hydrogen cyanide (HCN) production. The partial sequencing results were submitted to the National Center for Biotechnology Information (NCBI) under the accession numbers MW829776, MW829777, and MW829778. These strains are recommended for their evaluation as potential bioinoculants for inducing drought stress tolerance in wheat.

Crops around the world are facing a diversity of environmental problems, of which high temperatures are proving to be the most serious threat to crops. Polyamine putrescine (Put) acts as a master growth regulator that contributes to optimal plant growth and development and increased stress tolerance. Here, the current study aimed to elucidate how Put functions in regulating chlorophyll (Chl) metabolism, oxidative stress, and antioxidant defense, as well as to characterize the expression of genes related to heat stress in tomato seedlings under such stress. The results revealed that Put treatment significantly attenuates heat-induced damage by promoting biomass production, increasing photosynthetic efficiency, and inhibiting excessive production of oxidative stress markers. Heat stress markedly decreased the Chl content in the tomato leaf and accelerated the leaf yellowing process. However, Put-treated tomato seedlings showed a higher Chl content, which could be associated with the functions of Put in elevating PBGD activity (Chl biosynthesis enzyme) and suppressing the activity of the Chl catabolic enzyme (Chlase and MDCase). Under high-temperature stress, the expression levels of the gene encoding factors involved in Chl biosynthesis and Chl catabolism were significantly down- and upregulated, respectively, and this trend was reversed in Put-treated heat-stressed seedlings. In addition, exogenous application of Put boosted the activity of antioxidant enzymes, along with the levels of expression of their encoding genes, only in plants that were heat stressed. Furthermore, the expression levels of heat-shock-related genes (HSP90, HSP70, and HsfA1) were elevated in Put-treated, high-temperature-stressed tomato seedlings. Taken together, our results indicate that Put treatment significantly increases the heat tolerance of tomato seedlings, by elevating Chl concentrations and suppressing Chl catabolic enzyme activity, modulating endogenous free PA content, increasing antioxidant defense efficiency, and upregulating the expression of heat-shock-related genes.

Irrigation with sewage-contaminated water poses a serious threat to food security, particularly in developing countries. Heavy metal tolerant bacteria are sustainable alternatives for the removal of wastewater contaminants. In the present study, four lead (Pb)-tolerant strains viz. Bacillus megaterium (N8), Bacillus safensis (N11), Bacillus sp. (N18), and Bacillus megaterium (N29) were inoculated in spinach and grown in sewage water treated earthen pots separately and in combination with canal water. Results showed that Pb-tolerant strains significantly improved plant growth and antioxidant activities in spinach and reduces metal concentration in roots and leaves of spinach plants irrigated with treated wastewater. Strain Bacillus sp. (N18) followed by B. safensis (N11) caused the maximum increase in shoot length, root length, shoot fresh weight, root fresh weight, shoot dry weight, root dry weight, and leaf area compared to the uninoculated control of sewage water treated plants. These strains also improved antioxidant enzymatic activity including catalase, guaiacol peroxidase dismutase, superoxide dismutase, and peroxidases activities compared to the uninoculated control under sewage water conditions. Strain Bacillus sp. (N18) followed by B. safensis (N11) showed the highest reduction in nickel, cadmium, chromium, and Pb contents in roots and leaves of spinach compared to the uninoculated control plants treated with the sewage water. Such potential Pb-tolerant Bacillus strains could be recommended for the growth promotion of spinach after extensive evaluation under field conditions contaminated with wastewater.