Elahe Parham
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Elahe Parham has a total of 45 co-authors. Here are the top co-authors by number of shared publications:
- Daniel C. Côté
CERVO brain research center, Université, Department of Physics, Laval, Québec, Canada
5 shared publications - Martin Parent
CERVO Brain Research Center, Department of Psychiatry and Neuroscience, Faculty of Medicine, Université Laval, Quebec City, Canada
4 shared publications Mireille Quémener
Université Laval, Department of Physics, Physics Engineering and Optics CERVO Brain Research Center Centre d’optique Photonique et laser 2301 Av. D'Estimauville, Québec, QC G1E 1T2
3 shared publications- Antoine Rousseau
CERVO Brain Research Center, Québec City, Québec, Canada
2 shared publications - Cléophace Akitegetse
Zilia inc
2 shared publications - Damon DePaoli
Université Laval, CERVO Brain Research Center, Quebec City, Quebec, Canada
2 shared publications
Latest Publications
- Open Access
- 1 April 2025
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 12 (02) , 025008-14
Retinal changes detected by diffuse reflectance spectroscopy in parkinsonian monkeys
Parkinson’s disease (PD) is characterized by the progressive loss of dopamine (DA) neurons of the substantia nigra pars compacta (SNc), leading to the appearance of debilitating motor symptoms, in addition to nonmotor symptoms.1,2 This neurodegenerative disorder is incurable, and although some motor symptoms can be alleviated by the administration of the DA metabolic precursor levodopa, such pharmacotherapy eventually leads to adverse side effects in the form of dyskinesias, leaving very limited options for alternative treatments.3 – 6 As the second most common neurodegenerative disease next to Alzheimer’s disease (AD), it is a burden on healthcare services worldwide, especially with the rapidly increasing aging population.7 For this reason, research efforts are being made to find alternative ways to detect PD, alleviate its symptoms, slow its progression, and find a cure.
- 1 April 2025
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 12 (02) , 025008-14
Open AccessRetinal changes detected by diffuse reflectance spectroscopy in parkinsonian monkeys
Parkinson’s disease (PD) is characterized by the progressive loss of dopamine (DA) neurons of the substantia nigra pars compacta (SNc), leading to the appearance of debilitating motor symptoms, in addition to nonmotor symptoms.1,2 This neurodegenerative disorder is incurable, and although some motor symptoms can be alleviated by the administration of the DA metabolic precursor levodopa, such pharmacotherapy eventually leads to adverse side effects in the form of dyskinesias, leaving very limited options for alternative treatments.3 – 6 As the second most common neurodegenerative disease next to Alzheimer’s disease (AD), it is a burden on healthcare services worldwide, especially with the rapidly increasing aging population.7 For this reason, research efforts are being made to find alternative ways to detect PD, alleviate its symptoms, slow its progression, and find a cure.
- 1 January 2025
- Published by Optica Publishing Group
- p. DTu4A.3
Fiber-based wavelength-swept spontaneous Raman spectroscopy system for whole brain tissue classification
We introduce a wavelength-swept Raman spectroscopy technique that enhances signal detection compared to conventional Raman spectrometers using a sweeping laser and wide-area detector. Validated experimentally, it enables rapid, fiber-based data acquisition for brain tissue differentiation.
- 1 January 2025
- Published by Optica Publishing Group
- p. DTu4A.3
Fiber-based wavelength-swept spontaneous Raman spectroscopy system for whole brain tissue classification
We introduce a wavelength-swept Raman spectroscopy technique that enhances signal detection compared to conventional Raman spectrometers using a sweeping laser and wide-area detector. Validated experimentally, it enables rapid, fiber-based data acquisition for brain tissue differentiation.
- Open Access
- 1 January 2025
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 12 (01) , 1-13
Enhanced spectral resolution and reduced acquisition time in fiber-based wavelength-swept source Raman spectroscopy
SignificanceWe introduce a fast Raman spectroscopy (SSRS) system that reduces acquisition time and enhances data quality, providing a breakthrough in SSRS for real-time applications. We demonstrate its utility in differentiating brain tissue regions based on lipid and protein content.AimOur primary goal was to develop a fast SSRS system that enables rapid data acquisition for in vivo applications. We aimed to investigate its effectiveness in differentiating brain tissue types by analyzing lipid and protein content, ultimately enhancing classification accuracy and supporting advancements in medical diagnostics.ApproachWe implemented an optimized circuit and signal processing technique to reduce high-frequency noise and improve signal-to-noise ratio. Brain tissue measurements were validated against staining models, and classification accuracy was tested with principal component analysis (PCA) and support vector machine (SVM).ResultsOur SSRS system captures spectra in 1 s which is significantly faster than similar systems. This rapid method enables real-time monitoring and accurate classification of brain regions based on lipid–protein content, confirmed by neurofilament and Nissl staining correlations (R2=0.75 and 0.55, respectively). Tissue classification showed 80.20% accuracy using spectral intensity at the wavenumbers associated with C–H, CH3, and CH2 vibrations and 81.23% accuracy using PCA-derived features (PC1, PC2, and PC3).ConclusionsThe fast-SSRS system marks a significant advance in Raman spectroscopy, improving speed and data quality. Our setup captures finer spectral details, facilitating reliable differentiation of tissue types, as verified by staining methods and PCA. This method shows promise for real-time tissue analysis and medical diagnostics, outperforming traditional Raman techniques in speed and data throughput.
- 1 January 2025
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 12 (01) , 1-13
Open AccessEnhanced spectral resolution and reduced acquisition time in fiber-based wavelength-swept source Raman spectroscopy
SignificanceWe introduce a fast Raman spectroscopy (SSRS) system that reduces acquisition time and enhances data quality, providing a breakthrough in SSRS for real-time applications. We demonstrate its utility in differentiating brain tissue regions based on lipid and protein content.AimOur primary goal was to develop a fast SSRS system that enables rapid data acquisition for in vivo applications. We aimed to investigate its effectiveness in differentiating brain tissue types by analyzing lipid and protein content, ultimately enhancing classification accuracy and supporting advancements in medical diagnostics.ApproachWe implemented an optimized circuit and signal processing technique to reduce high-frequency noise and improve signal-to-noise ratio. Brain tissue measurements were validated against staining models, and classification accuracy was tested with principal component analysis (PCA) and support vector machine (SVM).ResultsOur SSRS system captures spectra in 1 s which is significantly faster than similar systems. This rapid method enables real-time monitoring and accurate classification of brain regions based on lipid–protein content, confirmed by neurofilament and Nissl staining correlations (R2=0.75 and 0.55, respectively). Tissue classification showed 80.20% accuracy using spectral intensity at the wavenumbers associated with C–H, CH3, and CH2 vibrations and 81.23% accuracy using PCA-derived features (PC1, PC2, and PC3).ConclusionsThe fast-SSRS system marks a significant advance in Raman spectroscopy, improving speed and data quality. Our setup captures finer spectral details, facilitating reliable differentiation of tissue types, as verified by staining methods and PCA. This method shows promise for real-time tissue analysis and medical diagnostics, outperforming traditional Raman techniques in speed and data throughput.
- Open Access
- 14 November 2024
- Published by Frontiers Media SA in Frontiers in Photonics
- Vol. 5, 1502799
Estimating retinal blood oxygenation from diffuse reflectance spectra of semi-infinite tissue using principal component analysis
Diffuse reflectance spectroscopy (DRS) is a promising technique for non-invasive monitoring of tissue oxygen saturation (StO2). However, the interpretation of DRS data can be complicated by the presence of confounding factors such as the volume fraction of blood, tissue scattering, and lipid content which both absorb and scatter. Principal component analysis (PCA) is a multivariate statistical method that can help overcome these challenges by extracting relevant information from complex datasets and providing new dimensions used to estimate parameters such as concentrations. In this study, we present a PCA-based algorithm for estimating retinal StO2 from DRS measurements. We evaluated the performance of our algorithm using simulated data and experimental measurements on a retinal tissue phantom model. Our results show that the PCA-based algorithm can estimate the value of StO2 with a root-mean-square error of 6.38% in the presence of confounding factors. Our study demonstrates the potential of PCA as a powerful tool for extracting the concentration of components from complex DRS.
- 14 November 2024
- Published by Frontiers Media SA in Frontiers in Photonics
- Vol. 5, 1502799
Open AccessEstimating retinal blood oxygenation from diffuse reflectance spectra of semi-infinite tissue using principal component analysis
Diffuse reflectance spectroscopy (DRS) is a promising technique for non-invasive monitoring of tissue oxygen saturation (StO2). However, the interpretation of DRS data can be complicated by the presence of confounding factors such as the volume fraction of blood, tissue scattering, and lipid content which both absorb and scatter. Principal component analysis (PCA) is a multivariate statistical method that can help overcome these challenges by extracting relevant information from complex datasets and providing new dimensions used to estimate parameters such as concentrations. In this study, we present a PCA-based algorithm for estimating retinal StO2 from DRS measurements. We evaluated the performance of our algorithm using simulated data and experimental measurements on a retinal tissue phantom model. Our results show that the PCA-based algorithm can estimate the value of StO2 with a root-mean-square error of 6.38% in the presence of confounding factors. Our study demonstrates the potential of PCA as a powerful tool for extracting the concentration of components from complex DRS.
- Open Access
- 1 April 2024
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 11 (02) , 025007-13
Wavelength-swept spontaneous Raman spectroscopy system improves fiber-based collection efficiency for whole brain tissue classification
Raman scattering is a phenomenon in which light is inelastically scattered by a material in a way that shifts the frequency of the light to different wavelengths. This shift in frequency can be used to determine the vibrational modes of the material and is therefore a powerful tool for chemical analysis and material characterization.1,2 In Raman spectroscopy, a laser beam is used to excite the sample molecules to a virtual higher energy state. The excited molecules then re-emit light with a different energy when they return to a vibrational excited state, and the difference in frequency between the excitation and scattered light is used to identify chemical bonds and the structure of the sample.3 – 5 In Raman spectroscopy, the basic setup typically includes a monochromatic light source, usually in the visible or near-infrared range; a sample holder; and a spectrometer as the detector.3
- 1 April 2024
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 11 (02) , 025007-13
Open AccessWavelength-swept spontaneous Raman spectroscopy system improves fiber-based collection efficiency for whole brain tissue classification
Raman scattering is a phenomenon in which light is inelastically scattered by a material in a way that shifts the frequency of the light to different wavelengths. This shift in frequency can be used to determine the vibrational modes of the material and is therefore a powerful tool for chemical analysis and material characterization.1,2 In Raman spectroscopy, a laser beam is used to excite the sample molecules to a virtual higher energy state. The excited molecules then re-emit light with a different energy when they return to a vibrational excited state, and the difference in frequency between the excitation and scattered light is used to identify chemical bonds and the structure of the sample.3 – 5 In Raman spectroscopy, the basic setup typically includes a monochromatic light source, usually in the visible or near-infrared range; a sample holder; and a spectrometer as the detector.3
- Open Access
- 1 April 2024
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 11 (02) , 025006-11
Human brain tissue identification using coherent anti-Stokes Raman scattering spectroscopy and diffuse reflectance spectroscopy for deep brain stimulation surgery
Parkinson’s disease (PD) is the second most common neurodegenerative disorder after Alzheimer’s disease.1 The primary clinical signs of PD are motor symptoms that include resting tremors, muscular rigidity, and slowness of movements.2 The initial treatment of PD usually starts by administering the dopamine precursor l-dopa. However, over time, this pharmacological treatment becomes less effective, and most patients will eventually suffer from l-dopa-induced dyskinesia.3,4 For these patients, deep brain stimulation (DBS) surgery is often the recommended treatment option.5
- 1 April 2024
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 11 (02) , 025006-11
Open AccessHuman brain tissue identification using coherent anti-Stokes Raman scattering spectroscopy and diffuse reflectance spectroscopy for deep brain stimulation surgery
Parkinson’s disease (PD) is the second most common neurodegenerative disorder after Alzheimer’s disease.1 The primary clinical signs of PD are motor symptoms that include resting tremors, muscular rigidity, and slowness of movements.2 The initial treatment of PD usually starts by administering the dopamine precursor l-dopa. However, over time, this pharmacological treatment becomes less effective, and most patients will eventually suffer from l-dopa-induced dyskinesia.3,4 For these patients, deep brain stimulation (DBS) surgery is often the recommended treatment option.5
- Open Access
- 21 January 2021
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 8 (01) , 010801-19
Tools and tutorial on practical ray tracing for microscopy
Engineers and scientists operating in fields such as neurophotonics, remote sensing, medicine, or even industrial manufacturing are often tasked with building or modifying imaging systems for customized applications. They must often resort to expert advice from optical designers to obtain clear and quantitative answers to their specific optics problems. Optical designers, with their knowledge and specialized software tools such as Zemax, Oslo, or CODE V, can indeed provide these answers. However, third-party expert advice can be prohibitively expensive, difficult to interpret without basic knowledge, and can lead to sub-optimal solutions if the requirements are miscommunicated to the external consultant. For the general engineer, scientist, and especially for trainees, learning these professional software tools is often not an option because of the abundance of features targeted to advanced optical designers that end up confusing trainees and non-experts alike. Yet, there should be a solution, between simplified analytical solutions and expert tools that can help non-experts tackle moderately complicated problems by themselves to obtain quantitative answers. It is therefore the purpose of the present tutorial to provide both the knowledge and the tools for this audience.
- 21 January 2021
- Published by SPIE-Intl Soc Optical Eng in Neurophotonics
- Vol. 8 (01) , 010801-19
Open AccessTools and tutorial on practical ray tracing for microscopy
Engineers and scientists operating in fields such as neurophotonics, remote sensing, medicine, or even industrial manufacturing are often tasked with building or modifying imaging systems for customized applications. They must often resort to expert advice from optical designers to obtain clear and quantitative answers to their specific optics problems. Optical designers, with their knowledge and specialized software tools such as Zemax, Oslo, or CODE V, can indeed provide these answers. However, third-party expert advice can be prohibitively expensive, difficult to interpret without basic knowledge, and can lead to sub-optimal solutions if the requirements are miscommunicated to the external consultant. For the general engineer, scientist, and especially for trainees, learning these professional software tools is often not an option because of the abundance of features targeted to advanced optical designers that end up confusing trainees and non-experts alike. Yet, there should be a solution, between simplified analytical solutions and expert tools that can help non-experts tackle moderately complicated problems by themselves to obtain quantitative answers. It is therefore the purpose of the present tutorial to provide both the knowledge and the tools for this audience.
- Open Access
- 1 January 2021
- Published by Negah Scientific Publisher in Basic and Clinical Neuroscience Journal
- Vol. 12 (1) , 1-28
Linking Brain Biology to Intellectual Endowment: A Review on the Associations of Human Intelligence With Neuroimaging Data
Human intelligence has always been a fascinating subject for scientists. Since the inception of Spearman’s general intelligence in the early 1900s, there has been significant progress towards characterizing different aspects of intelligence and its relationship with structural and functional features of the brain. In recent years, the invention of sophisticated brain imaging devices using Diffusion-Weighted Imaging (DWI) and functional Magnetic Resonance Imaging (fMRI) has allowed researchers to test hypotheses about neural correlates of intelligence in humans.This review summarizes recent findings on the associations of human intelligence with neuroimaging data. To this end, first, we review the literature that has related brain morphometry to intelligence. Next, we elaborate on the applications of DWI and resting-state fMRI on the investigation of intelligence. Then, we provide a survey of literature that has used multimodal DWI-fMRI to shed light on intelligence. Finally, we discuss the state-of-the-art of individualized prediction of intelligence from neuroimaging data and point out future strategies. Future studies hold promising outcomes for machine learning-based predictive frameworks using neuroimaging features to estimate human intelligence.
- 1 January 2021
- Published by Negah Scientific Publisher in Basic and Clinical Neuroscience Journal
- Vol. 12 (1) , 1-28
Open AccessLinking Brain Biology to Intellectual Endowment: A Review on the Associations of Human Intelligence With Neuroimaging Data
Human intelligence has always been a fascinating subject for scientists. Since the inception of Spearman’s general intelligence in the early 1900s, there has been significant progress towards characterizing different aspects of intelligence and its relationship with structural and functional features of the brain. In recent years, the invention of sophisticated brain imaging devices using Diffusion-Weighted Imaging (DWI) and functional Magnetic Resonance Imaging (fMRI) has allowed researchers to test hypotheses about neural correlates of intelligence in humans.This review summarizes recent findings on the associations of human intelligence with neuroimaging data. To this end, first, we review the literature that has related brain morphometry to intelligence. Next, we elaborate on the applications of DWI and resting-state fMRI on the investigation of intelligence. Then, we provide a survey of literature that has used multimodal DWI-fMRI to shed light on intelligence. Finally, we discuss the state-of-the-art of individualized prediction of intelligence from neuroimaging data and point out future strategies. Future studies hold promising outcomes for machine learning-based predictive frameworks using neuroimaging features to estimate human intelligence.