PFPablo Menéndez Fernández-Miranda

Pablo Menéndez Fernández-Miranda

*This is an algorithmically generated author record based on publicly available information.

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Pablo Menéndez Fernández-Miranda has a total of 74 co-authors. Here are the top co-authors by number of shared publications:


Latest Publications

  • Training-Volume Analysis, Computational Efficiency, and Green AI in Rotator Cuff Calcific Tendinopathy Classification—A Two-Institution Study with External Validation

    by Juan Miranda Bautista, Javier Llorente Peris, David Corral Fontecha, Félix Guerra Gutiérrez, José A. Vega, Pablo Menéndez Fernández-Miranda

    To evaluate how training data volume influences diagnostic performance, external validation, robustness to training-subset composition, and computational efficiency in a VGG19-based model for rotator cuff calcific tendinopathy (RCCT) classification on shoulder radiographs (XRs), using training data from a single development institution. This retrospective two-institution study included 5056 shoulder XRs. A Visual Geometry Group 19 (VGG19)-based pipeline was trained on four cumulative fractions of a 4268-XRs development cohort: 25% (M25), 50% (M50), 75% (M75), and 100% (M100), using stratified 5-fold cross-validation. To assess robustness to training-subset composition, three nested cumulative sampling realizations were generated for M25, M50, and M75, while M100 represented the fixed full-data reference. Models were evaluated on an internal test cohort (\(n=480\)) and an external validation cohort (\(n=308\)). Areas under the receiver operating characteristic curves (AUCs) were compared using correlated DeLong tests with Holm adjustment. M75 and M100 were additionally assessed using two one-sided tests (TOST) with a \(\pm 0.02\) AUC equivalence margin. Training-volume robustness was assessed across repeated cumulative subset realizations. Grad-CAM localization was quantitatively evaluated against expert-defined lesion regions using Pointing Game, localization area under the precision-recall curve (AUPRC), and Energy-Based Pointing Game (EBPG), with Score-CAM used for qualitative corroboration. In the primary sampling realization, internal AUC increased from 0.869 with M25 to 0.951 with M100. External AUC increased from 0.835 (M25) to 0.903 (M50), 0.945 (M75), and 0.953 (M100). External improvements were significant from M25 to M50 and from M50 to M75 (both Holm-adjusted \(P<.001\)), whereas the M75-to-M100 increment was small (\(\Delta \)AUC=0.008; \(P=.161\)). M75 and M100 were externally equivalent within the \(\pm 0.02\) AUC margin (TOST \(P=.016\)). Across three independently sampled M75 subsets, external AUC remained highly stable (0.945–0.948; mean ± standard deviation, 0.946 ± 0.001), and all three M75 realizations were equivalent to M100. Compared with M100, M75 required 11.4% less training time and 15.4% less measured energy. In the primary seed-42 realization, quantitative Grad-CAM localization generally improved with increasing training volume: M100 achieved the highest Pointing Game and localization AUPRC in both cohorts, whereas EBPG peaked at M75. Increasing training volume improved model discrimination, but external gains showed marked diminishing returns beyond M75 in this VGG19-based RCCT classification task. Near-maximal external performance at M75 was reproducible across independent training-subset realizations and statistically equivalent to full-data training within the evaluated margin, supporting training-volume analysis as a strategy for balancing performance and computational resources within this study setting. In this VGG19-based RCCT classification task using training data from a single development institution, external discrimination showed marked diminishing returns beyond 75% training volume, with highly reproducible M75 performance across independent subset realizations and statistical equivalence to full-data training within a \(\pm 0.02\) AUC margin.

  • Open Access

    Interpretable deep learning for rotator cuff calcific tendinopathy diagnosis: a multi-center study

    by Juan Miranda Bautista, Javier Llorente Peris, Fernando Ybáñez Carrillo, Lara Lloret Iglesias, José A. Vega, Pablo Menéndez Fernández-Miranda

    The reliable deployment of artificial intelligence systems in medical imaging requires high diagnostic performance, robustness and interpretability. In this study, we developed and evaluated two automated frameworks for binary classification of shoulder radiographs (XRs) using deep learning (DL) and hybrid DL–machine learning (ML) approaches. A convolutional neural network (CNN) based on a fine-tuned VGG19 architecture was trained end-to-end on a large, balanced dataset of 4,268 shoulder XRs. In parallel, hybrid models were constructed by extracting deep feature representations from the trained network and combining them with traditional ML classifiers. Model performance was evaluated on independent internal ( n = 480) and external ( n = 308) validation sets. Both approaches achieved high discriminative performance. Paired comparison of Receiver Operating Characteristic (ROC) curves using the DeLong test revealed no statistically significant differences between the end-to-end CNN and the hybrid CNN–ML pipeline for either internal validation (AUC 0.956 vs. 0.961) or external generalization (AUC 0.940 vs. 0.942). Model interpretability was assessed using Grad-CAM and SHAP values. Our results suggest that while both frameworks are robust, the end-to-end DL approach offers a more streamlined workflow and more direct visual explainability via saliency maps. These findings support the potential of AI-based tools for shoulder XR analysis; however, prospective real-world validation, assessment under routine prevalence conditions, and direct comparison with human readers are still needed before clinical integration can be established.


  • Open Access

    A New Insight into Imaging Diagnosis of Otosclerosis Enhanced by Machine Learning and Radiomics

    by Marta Álvarez de Linera-Alperi, Juan Miranda Bautista, David Corral Fontecha, Josué Fernández Carnero, José A Vega, Pablo Menéndez Fernández-Miranda

    Otosclerosis is a disease affecting the middle and inner ear, characterized by abnormal bone remodeling that leads to stapes fixation and progressive hearing loss. Although high-resolution computed tomography (HRCT) is the standard imaging modality for diagnosis, its sensitivity is limited, with a high false-negative rate (FNR). This study investigates the use of radiomics and machine learning (ML) to improve diagnostic accuracy. HRCT scans from 99 subjects (48 otosclerosis, 51 controls) were analyzed, focusing on the stapes, antefenestral region (AF), and oval window (OW). From each scan, 6048 radiomic features were extracted and reduced to 1317 through feature selection. Statistical analyses and ML modeling were performed using the selected features. Sixty-seven biomarkers showed significant differences between cases and controls, primarily in the AF (56) and stapes (11); none were found in the OW. Both the AF and stapes exhibited increased heterogeneity in otosclerosis, reflecting the bone remodeling process. A reduction in the stapes' major axis was also observed, possibly related to torsional deformation. Image transformation filters enhanced disease visibility. Among several ML classifiers tested, L2-regularized logistic regression performed best, achieving an AUC of 0.90 ± 0.06, thereby enhancing the diagnostic accuracy reported in some studies for radiologists. Hierarchical clustering of the most predictive features further confirmed their strong discriminative power. Our findings highlight the potential of radiomics and ML to standardize otosclerosis diagnosis, reduce FNR, and support surgical decision-making. Future studies should validate these results using larger cohorts and advanced imaging technologies such as Photon-Counting CT.

  • Enhancing Radiomic Feature Robustness Through Voxel Spacing-Aware Extraction in Anisotropic CT Data

    by David Corral Fontecha, Pablo Menendez Fernández-Miranda, Sergio Rubio-Martín, Alicia Merayo-Corcoba, Laura Lopez González, Lara Lloret Iglesias, Jose A Vega

    This study aimed to evaluate whether voxel spacing-aware radiomic feature extraction improves reproducibility, variability, and discriminative performance compared to conventional preprocessing methods in anisotropic CT data. A curated cohort of 685 pulmonary nodules from the LIDC-IDRI dataset was analyzed. Three preprocessing strategies-no resampling, isotropic resampling, and voxel spacing-aware extraction-and one postprocessing approach, voxel spacing weighting, were systematically compared. A modified version of PyRadiomics was developed to compute texture and shape features directly from native images while incorporating physical voxel dimensions without interpolation. Among the 94 extracted features, spacingaware preprocessing improved reproducibility in 58 features, reduced variability in 48, and enhanced univariate discrimination in 37. An ensemble feature selection combining six statistical and machine learning methods identified between 18 and 20 robust features per method. Logistic Regression models trained with spacing-aware features achieved the highest composite performance score (1.498), balancing discrimination and generalizability. SHAP interpretability analysis confirmed the clinical relevance of selected geometric and texture features. Overall, voxel spacing-aware preprocessing preserved native spatial structure and mitigated the effects of voxel geometry and interpolation artifacts, yielding stable and clinically interpretable radiomic features. These findings support the adoption of spacing-aware pipelines in heterogeneous and multi-center CT radiomics studies to enhance feature robustness and reproducibility.

  • A Data-Centric Approach to Deep Learning for Brain Metastasis Analysis at MRI

    by Laurens Topff, Liliana Petrychenko, Neeraj Jain, Sara Lingier, Jeroen Bertels, Patricio Astudillo, Milan Prosec, Pablo Menéndez Fernández-Miranda, Olivier Gevaert, Marion Smits, et al.

    A data-centric approach prioritizing data quality enabled the development of a generalizable deep learning system that accurately detected and segmented brain metastases of all sizes on MRI scans.


  • Multi-task Learning Approach for Intracranial Hemorrhage Prognosis

    by Miriam Cobo, Amaia Pérez del Barrio, Pablo Menéndez Fernández-Miranda, Pablo Sanz Bellón, Lara Lloret Iglesias, Wilson Silva


  • Open Access

    A retrospective study of deep learning generalization across two centers and multiple models of X-ray devices using COVID-19 chest-X rays

    by Pablo Menéndez Fernández-Miranda, Enrique Marqués Fraguela, Marta Álvarez de Linera-Alperi, Miriam Cobo, Amaia Pérez del Barrio, David Rodríguez González, José A. Vega, Lara Lloret Iglesias

    Generalization of deep learning (DL) algorithms is critical for the secure implementation of computer-aided diagnosis systems in clinical practice. However, broad generalization remains to be a challenge in machine learning. This research aims to identify and study potential factors that can affect the internal validation and generalization of DL networks, namely the institution where the images come from, the image processing applied by the X-ray device, and the type of response function of the X-ray device. For these purposes, a pre-trained convolutional neural network (CNN) (VGG16) was trained three times for classifying COVID-19 and control chest radiographs with the same hyperparameters, but using different combinations of data acquired in two institutions by three different X-ray device manufacturers. Regarding internal validation, the addition of images from an external institution to the training set did not modify the algorithm’s internal performance, however, the inclusion of images acquired by a device from a different manufacturer decreased the performance up to 8% (p < 0.05). In contrast, generalization across institutions and X-ray devices with the same type of response function was achieved. Nonetheless, generalization was not observed across devices with different types of response function. This factor was the key impediment to achieving broad generalization in our research, followed by the device’s image-processing and the inter-institutional differences, which both reduced generalization performance to 18.9% (p < 0.05), and 9.8% (p < 0.05), respectively. Finally, clustering analysis with features extracted by the CNN was performed, revealing a substantial dependence of feature values extracted by the pre-trained CNN on the X-ray device which acquired the images.


  • Open Access

    Visual Fixation of Skull-Vibration-Induced Nystagmus in Patients with Peripheral Vestibulopathy

    by Melissa Blanco, Chiara Monopoli-Roca, Marta Álvarez de Linera-Alperi, Pablo Menéndez Fernández-Miranda, Bárbara Molina, Angel Batuecas-Caletrío, Nicolás Pérez-Fernández

    Nystagmus induced by applying an intense vibratory stimulus to the skull (SVIN) indicates vestibular functional asymmetry. In unilateral vestibular loss, a 100 Hz bone-conducted vibration given to either mastoid immediately causes a primarily horizontal nystagmus. The test is performed in darkness to avoid visual fixation (VF) but there are no data about how much VF affects the often-intense SVIN. The aim is to analyze the amount of reduction in SVIN when VF is allowed during testing. Thus, all patients seen in a tertiary hospital for vertigo or dizziness with positive SVIN were included. SVIN was recorded for 10 s for each condition: without VF (aSVINwo) and with VF (aSVINw). We obtained an aSVINwo and an aSVINw as average slow-phase velocities (SPV) without and with VF. VF index (FISVIN) was calculated as the ratio of SPV. Among the 124 patients included, spontaneous nystagmus (SN) was found in 25% and the median slow phase velocity (mSPV) (without VF) of SN was 2.6 ± 2.4°/s. Mean FISVIN was 0.27 ± 0.29. FISVIN was 0 in 42 patients, and FISVIN between 0 and 1 was found in 82 (mean FISVIN 0.39 ± 0.02). Fixation suppression was found in all patients with SVIN in cases of peripheral vestibulopathy. FISVIN clearly delineates two populations of patients: with or without a complete visual reduction in nystagmus.


  • Open Access

    Visual Fixation of Skull Vibration Induced Nystagmus in Patients with Peripheral Vestibulopathy

    by Melissa Blanco, Chiara Monopoli-Roca, Marta Álvarez de Linera-Alperi, Pablo Menéndez Fernández-Miranda, Bárbara Molina, Ángel Batuecas-Caletrío, Nicolás Pérez-Fernández

    Nystagmus induced by applying an intense vibratory stimulus to the skull (SVIN) indicates vestibular functional asymmetry. In unilateral vestibular loss, a 100-Hz bone-conducted vibration given to either mastoid immediately causes a primarily horizontal nystagmus. Test is performed in darkness to avoid visual fixation (VF) but there is no data about how much VF affects the often-intense SVIN. The aim is to analyze the amount of reduction of SVIN when VF is allowed during testing. Thus, all patients seen in a tertiary hospital for vertigo or dizziness with positive SVIN were included. SVIN was recorded for 10 seconds for each condition: without VF (aSVINwo) and VF (aSVINw). We obtained an aSVINwo and aSVINw as average slow-phase velocities (SPV) without and with VF. VF index (FISVIN) was calculated as the ratio of SPV. Among the 124 patients included, spontaneous nystagmus (SN) was found in 25% and the mSPV (without VF) of SN was 2.62.4º/s. Mean FISVIN was 0.270.29. FISVIN was 0 in 42 patients and >0 FISVIN <1 in 82 (mean FISVIN 0.390.02). Fixation suppression was found in all patients with SVIN in cases of peripheral vestibulopathy. FISVIN clearly delineates two populations of patients: with or without complete visual reduction of nystagmus.

  • Open Access

    A primer on deep learning and convolutional neural networks for clinicians

    by Lara Lloret Iglesias, Pablo Sanz Bellón, Amaia Pérez del Barrio, Pablo Menéndez Fernández-Miranda, David Rodríguez González, José A. Vega, Andrés A. González Mandly, José A. Parra Blanco

    Deep learning is nowadays at the forefront of artificial intelligence. More precisely, the use of convolutional neural networks has drastically improved the learning capabilities of computer vision applications, being able to directly consider raw data without any prior feature extraction. Advanced methods in the machine learning field, such as adaptive momentum algorithms or dropout regularization, have dramatically improved the convolutional neural networks predicting ability, outperforming that of conventional fully connected neural networks. This work summarizes, in an intended didactic way, the main aspects of these cutting-edge techniques from a medical imaging perspective.