Tiago Lopes
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Tiago Lopes has a total of 18 co-authors. Here are the top co-authors by number of shared publications:
- Etelvina Figueira
Centre for Environmental and Marine Studies (CESAM), Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
8 shared publications - Paulo Cardoso
CESAM, Centre for Environmental and Marine Studies and Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
7 shared publications - Ricardo Pinto
Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
4 shared publications - Jacinta Santos
Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
2 shared publications - Paula Alexandrina A. P. Marques
University of Aveiro
2 shared publications - Pedro Costa
Department of Biology and CESAM, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
2 shared publications
Latest Publications
- Open Access
Phosphate-Solubilizing Bacteria from Different Genera, Host Plants, and Climates: Influence of Soil pH on Plant Growth and Biochemistry
Phosphorus (P) is an essential element for plant growth, yet it is only available to plants in the form of orthophosphate. In most soils, P occurs predominantly in insoluble forms, such as calcium phosphates in alkaline soils and aluminum/iron phosphates in acidic soils, limiting plant uptake. Fertilization is commonly used to overcome this limitation; however, large fractions of applied P rapidly become unavailable. Phosphorus-solubilizing bacteria (PSB) are a sustainable alternative to enhance P availability. This study evaluated the P-solubilization capacity of bacterial strains belonging to different genera isolated from different host plants, soil types, and climates (mainland Portugal, Cape Verde, and Angola). Following initial screening, the most efficient strains were tested under greenhouse conditions in soils with pH 7 and 8. Strains exhibited diverse solubilization capacities, with highly efficient PSB (phosphate solubilization index ≥ 2) accounting for 5% of the total isolates, predominantly originating from the Namib Desert (Angola) and Southern Portugal, and mainly belonging to the genera Pseudomonas, Flavobacterium, Enterobacter, Chryseobacterium and Pantoea. At pH 7, most PSB promoted maize growth, with strain C11 increasing plant P content around 2-fold compared to the control. At pH 8, fewer strains were effective, but strains F and C11 enhanced shoot weight and M shoot length by 28%, 27%, and 10%, respectively. These findings highlight the potential of selected PSB strains as next-generation bioinoculants for sustainable agriculture. However, strain selection must consider geography, crop type, and management practices to ensure consistent efficacy, thereby supporting the broader application of PSB as a precision tool for improving food security.
Open AccessPhosphate-Solubilizing Bacteria from Different Genera, Host Plants, and Climates: Influence of Soil pH on Plant Growth and Biochemistry
Phosphorus (P) is an essential element for plant growth, yet it is only available to plants in the form of orthophosphate. In most soils, P occurs predominantly in insoluble forms, such as calcium phosphates in alkaline soils and aluminum/iron phosphates in acidic soils, limiting plant uptake. Fertilization is commonly used to overcome this limitation; however, large fractions of applied P rapidly become unavailable. Phosphorus-solubilizing bacteria (PSB) are a sustainable alternative to enhance P availability. This study evaluated the P-solubilization capacity of bacterial strains belonging to different genera isolated from different host plants, soil types, and climates (mainland Portugal, Cape Verde, and Angola). Following initial screening, the most efficient strains were tested under greenhouse conditions in soils with pH 7 and 8. Strains exhibited diverse solubilization capacities, with highly efficient PSB (phosphate solubilization index ≥ 2) accounting for 5% of the total isolates, predominantly originating from the Namib Desert (Angola) and Southern Portugal, and mainly belonging to the genera Pseudomonas, Flavobacterium, Enterobacter, Chryseobacterium and Pantoea. At pH 7, most PSB promoted maize growth, with strain C11 increasing plant P content around 2-fold compared to the control. At pH 8, fewer strains were effective, but strains F and C11 enhanced shoot weight and M shoot length by 28%, 27%, and 10%, respectively. These findings highlight the potential of selected PSB strains as next-generation bioinoculants for sustainable agriculture. However, strain selection must consider geography, crop type, and management practices to ensure consistent efficacy, thereby supporting the broader application of PSB as a precision tool for improving food security.
- Open Access
Inducing Drought Resilience in Maize Through Encapsulated Bacteria: Physiological and Biochemical Adaptations
Droughts are projected to become prevalent throughout the 21st century, endangering agricultural productivity and global food security. To address these challenges, novel strategies to enhance water management and augment plant resilience are imperative. Bacterial encapsulation has emerged as a promising approach, offering benefits such as enhanced bacterial survival, soil compatibility, and sustainable plant growth. This study evaluated the osmotolerance of bacteria from arid environments and determined their plant growth-promoting ability in drought conditions. The encapsulation of these bacteria in bio-compatible capsules led to a substantial enhancement in the performance of maize plants under drought stress. Maize plants treated with encapsulated bacteria demonstrated a 35% increase in root biomass and a 28% enhancement in shoot growth compared to untreated controls. Furthermore, significant physiological and biochemical adaptations were observed, including a 45% increase in photosynthetic pigment concentration and higher osmolyte levels, which contributed to improved drought stress tolerance. The findings of this study demonstrate the potential of encapsulated bacteria to enhance maize resilience to drought, thereby supporting robust growth under water-limited conditions. This approach presents a sustainable strategy to improve drought tolerance, and it may reduce irrigation dependency and maintain crop yields in the face of increasing climate uncertainty.
Open AccessInducing Drought Resilience in Maize Through Encapsulated Bacteria: Physiological and Biochemical Adaptations
Droughts are projected to become prevalent throughout the 21st century, endangering agricultural productivity and global food security. To address these challenges, novel strategies to enhance water management and augment plant resilience are imperative. Bacterial encapsulation has emerged as a promising approach, offering benefits such as enhanced bacterial survival, soil compatibility, and sustainable plant growth. This study evaluated the osmotolerance of bacteria from arid environments and determined their plant growth-promoting ability in drought conditions. The encapsulation of these bacteria in bio-compatible capsules led to a substantial enhancement in the performance of maize plants under drought stress. Maize plants treated with encapsulated bacteria demonstrated a 35% increase in root biomass and a 28% enhancement in shoot growth compared to untreated controls. Furthermore, significant physiological and biochemical adaptations were observed, including a 45% increase in photosynthetic pigment concentration and higher osmolyte levels, which contributed to improved drought stress tolerance. The findings of this study demonstrate the potential of encapsulated bacteria to enhance maize resilience to drought, thereby supporting robust growth under water-limited conditions. This approach presents a sustainable strategy to improve drought tolerance, and it may reduce irrigation dependency and maintain crop yields in the face of increasing climate uncertainty.
- Open Access
- 18 February 2025
- Published by MDPI AG in Antioxidants
- Vol. 14 (2) , 230
Biodegradable Microplastics from Agricultural Mulch Films: Implications for Plant Growth-Promoting Bacteria and Plant’s Oxidative Stress
This study explores the interactions between biodegradable (BIO) microplastics and plant growth-promoting bacteria (PGPB), assessing their effects on soil health and crop productivity. Five bacterial strains, Bacillus, Enterobacter, Kosakonia, Rhizobium, and Pseudomonas, were exposed to BIO microplastics to examine strain-specific responses. This study revealed that while most bacteria experienced growth inhibition, Kosakonia sp. O21 was poorly affected by BIO microplastics, indicating a potential for microplastic degradation. This study further investigated the effect of these microplastics on plant growth and biochemistry. Results showed that exposure to BIO microplastics significatively reduced plant growth and caused oxidative stress, affecting membranes and proteins and inducing the activity of glutathione S-transferases (GSTs), catalase (CAT), and superoxide dismutase (SOD) as antioxidant responses. Bacterial inoculation alleviated plant oxidative stress, especially at lower concentrations of microplastics. These findings emphasize the critical role of oxidative stress in mediating the negative effects of BIO microplastics on plants and the relevance of bacterial strains that can tolerate BIO microplastics to protect plants from BIO microplastics’ effects. Results also highlight the importance of extending research to assess the long-term implications of biodegradable microplastics for soil PGPBs and plant health and crop productivity. This study contributes to sustainable agricultural practices by offering insights into mitigating the risks of microplastic pollution through microbial-based interventions.
- 18 February 2025
- Published by MDPI AG in Antioxidants
- Vol. 14 (2) , 230
Open AccessBiodegradable Microplastics from Agricultural Mulch Films: Implications for Plant Growth-Promoting Bacteria and Plant’s Oxidative Stress
This study explores the interactions between biodegradable (BIO) microplastics and plant growth-promoting bacteria (PGPB), assessing their effects on soil health and crop productivity. Five bacterial strains, Bacillus, Enterobacter, Kosakonia, Rhizobium, and Pseudomonas, were exposed to BIO microplastics to examine strain-specific responses. This study revealed that while most bacteria experienced growth inhibition, Kosakonia sp. O21 was poorly affected by BIO microplastics, indicating a potential for microplastic degradation. This study further investigated the effect of these microplastics on plant growth and biochemistry. Results showed that exposure to BIO microplastics significatively reduced plant growth and caused oxidative stress, affecting membranes and proteins and inducing the activity of glutathione S-transferases (GSTs), catalase (CAT), and superoxide dismutase (SOD) as antioxidant responses. Bacterial inoculation alleviated plant oxidative stress, especially at lower concentrations of microplastics. These findings emphasize the critical role of oxidative stress in mediating the negative effects of BIO microplastics on plants and the relevance of bacterial strains that can tolerate BIO microplastics to protect plants from BIO microplastics’ effects. Results also highlight the importance of extending research to assess the long-term implications of biodegradable microplastics for soil PGPBs and plant health and crop productivity. This study contributes to sustainable agricultural practices by offering insights into mitigating the risks of microplastic pollution through microbial-based interventions.
- Open Access
Soil Bacteria from the Namib Desert: Insights into Plant Growth Promotion and Osmotolerance in a Hyper-Arid Environment
The Namib Desert is characterized by a number of abiotic stresses, including high temperature, high salinity, osmotic pressure, alkaline pH, and limited water availability. In such environments, dry soils typically exhibit a low water potential, scarce nutrients, and high concentrations of dissolved ions, collectively creating a challenging habitat for microbial life. In this study, 89 bacterial isolates belonging to 20 genera were identified. Bacteria demonstrated significant osmotolerance, with some strains thriving at polyethylene glycol (PEG) concentrations exceeding 20%. Furthermore, these bacteria demonstrated halotolerance, high pH tolerance, and capacity to produce plant growth-promoting (PGP) traits under conditions of osmotic stress. Osmotolerant bacteria exhibited higher proficiency in siderophore production, potassium solubilization, and phosphorus solubilization, all of which are critical for supporting plant growth in nutrient-scarce and stressful environments, such as deserts. However, alginate production was higher in isolates that were less osmotolerant, indicating the potential for a compensatory mechanism in strains that were more sensitive. These findings highlight the complex strategies employed by desert bacteria to survive and support host plants in extreme environments. The present study not only enhances our understanding of microbial adaptations in arid ecosystems, but also provides important information for the development of potential applications for these bacteria in the reclamation of arid land and agricultural practices aimed at improving crop resilience to abiotic stress.
Open AccessSoil Bacteria from the Namib Desert: Insights into Plant Growth Promotion and Osmotolerance in a Hyper-Arid Environment
The Namib Desert is characterized by a number of abiotic stresses, including high temperature, high salinity, osmotic pressure, alkaline pH, and limited water availability. In such environments, dry soils typically exhibit a low water potential, scarce nutrients, and high concentrations of dissolved ions, collectively creating a challenging habitat for microbial life. In this study, 89 bacterial isolates belonging to 20 genera were identified. Bacteria demonstrated significant osmotolerance, with some strains thriving at polyethylene glycol (PEG) concentrations exceeding 20%. Furthermore, these bacteria demonstrated halotolerance, high pH tolerance, and capacity to produce plant growth-promoting (PGP) traits under conditions of osmotic stress. Osmotolerant bacteria exhibited higher proficiency in siderophore production, potassium solubilization, and phosphorus solubilization, all of which are critical for supporting plant growth in nutrient-scarce and stressful environments, such as deserts. However, alginate production was higher in isolates that were less osmotolerant, indicating the potential for a compensatory mechanism in strains that were more sensitive. These findings highlight the complex strategies employed by desert bacteria to survive and support host plants in extreme environments. The present study not only enhances our understanding of microbial adaptations in arid ecosystems, but also provides important information for the development of potential applications for these bacteria in the reclamation of arid land and agricultural practices aimed at improving crop resilience to abiotic stress.
- Open Access
Bacterial Volatile Organic Compounds as a Strategy to Increase Drought Tolerance in Maize (Zea mays L.): Influence on Plant Biochemistry
Maize is highly susceptible to drought, which affects growth and yield. This study investigated how bacterial volatile organic compounds (BVOCs) affect maize drought tolerance. Drought reduced shoot size but increased root length, an adaptation for accessing deeper soil moisture. BVOCs from strain D12 significantly increased root length and shoot growth under drought conditions. Drought also altered root biochemistry, decreasing enzyme activity, and increased osmolyte levels. BVOCs from strains F11 and FS4-14 further increased osmolyte levels but did not protect membranes from oxidative damage, while BVOCs from strains D12 and D7 strains reduced osmolyte levels and cell damage. In shoots, drought increased the levels of osmolytes and oxidative stress markers. BVOCs from FS4-14 had minimal effects on shoot biochemistry. BVOCs from D12 and F11 partially restored metabolic activity but did not reduce cell damage. BVOCs from D7 reduced metabolic activity and cell damage. These results suggest that BVOCs can modulate the biochemical response of maize to drought, with some strains evidencing the potential to enhance drought tolerance.
Open AccessBacterial Volatile Organic Compounds as a Strategy to Increase Drought Tolerance in Maize (Zea mays L.): Influence on Plant Biochemistry
Maize is highly susceptible to drought, which affects growth and yield. This study investigated how bacterial volatile organic compounds (BVOCs) affect maize drought tolerance. Drought reduced shoot size but increased root length, an adaptation for accessing deeper soil moisture. BVOCs from strain D12 significantly increased root length and shoot growth under drought conditions. Drought also altered root biochemistry, decreasing enzyme activity, and increased osmolyte levels. BVOCs from strains F11 and FS4-14 further increased osmolyte levels but did not protect membranes from oxidative damage, while BVOCs from strains D12 and D7 strains reduced osmolyte levels and cell damage. In shoots, drought increased the levels of osmolytes and oxidative stress markers. BVOCs from FS4-14 had minimal effects on shoot biochemistry. BVOCs from D12 and F11 partially restored metabolic activity but did not reduce cell damage. BVOCs from D7 reduced metabolic activity and cell damage. These results suggest that BVOCs can modulate the biochemical response of maize to drought, with some strains evidencing the potential to enhance drought tolerance.
- Open Access
- 3 May 2024
- Published by MDPI AG in Antioxidants
- Vol. 13 (5) , 565
How Bacteria Cope with Oxidative Stress Induced by Cadmium: Volatile Communication Is Differentially Perceived among Strains
Soil is an environment with numerous niches, where bacteria are exposed to diverse conditions. Some bacteria are exposed earlier than others to pressure, and the emission of signals that other bacteria can receive and perceive may allow a better response to an eminent stimulus. To shed light on how bacteria trigger their response and adapt to changes in the environment, the intra- and interspecific influences of volatiles on bacterial strains growing under non-stressed and cadmium-stressed conditions were assessed. Each strain was exposed to its volatiles emitted by cells growing under different conditions to test whether the environment in which a cell grows influences neighboring cells. The five genera tested showed different responses, with Rhizobium displaying the greatest influence. In a second experiment, 13 strains from different genera were grown under control conditions but exposed to volatiles released by Cd-stressed Rhizobium cells to ascertain whether Rhizobium’s observed influence was strain-specific or broader. Our results showed that the volatiles emitted by some bacteria under stress are differentially perceived and translated into biochemical changes (growth, alteration of the antioxidant response, and oxidative damage) by other bacteria, which may increase the adaptability and resilience of bacterial communities to environmental changes, especially those with a prooxidant nature. Cadmium (Cd) contamination of soils constitutes a risk to the environment and human health. Here, we showed the effects of Cd exposure on bacteria and how volatile communication influences the biochemistry related to coping with oxidative stress. This knowledge can be important for remediation and risk assessment and highlights that new biological features, such as volatile communication, should be considered when studying and assessing the impact of contaminants on soil ecosystems.
- 3 May 2024
- Published by MDPI AG in Antioxidants
- Vol. 13 (5) , 565
Open AccessHow Bacteria Cope with Oxidative Stress Induced by Cadmium: Volatile Communication Is Differentially Perceived among Strains
Soil is an environment with numerous niches, where bacteria are exposed to diverse conditions. Some bacteria are exposed earlier than others to pressure, and the emission of signals that other bacteria can receive and perceive may allow a better response to an eminent stimulus. To shed light on how bacteria trigger their response and adapt to changes in the environment, the intra- and interspecific influences of volatiles on bacterial strains growing under non-stressed and cadmium-stressed conditions were assessed. Each strain was exposed to its volatiles emitted by cells growing under different conditions to test whether the environment in which a cell grows influences neighboring cells. The five genera tested showed different responses, with Rhizobium displaying the greatest influence. In a second experiment, 13 strains from different genera were grown under control conditions but exposed to volatiles released by Cd-stressed Rhizobium cells to ascertain whether Rhizobium’s observed influence was strain-specific or broader. Our results showed that the volatiles emitted by some bacteria under stress are differentially perceived and translated into biochemical changes (growth, alteration of the antioxidant response, and oxidative damage) by other bacteria, which may increase the adaptability and resilience of bacterial communities to environmental changes, especially those with a prooxidant nature. Cadmium (Cd) contamination of soils constitutes a risk to the environment and human health. Here, we showed the effects of Cd exposure on bacteria and how volatile communication influences the biochemistry related to coping with oxidative stress. This knowledge can be important for remediation and risk assessment and highlights that new biological features, such as volatile communication, should be considered when studying and assessing the impact of contaminants on soil ecosystems.
- Open Access
- 24 December 2022
- Published by MDPI AG in Microorganisms
- Vol. 11 (1) , 57
Bacteria Associated with the Roots of Common Bean (Phaseolus vulgaris L.) at Different Development Stages: Diversity and Plant Growth Promotion
Current agricultural methodologies are vulnerable to erratic climate and are dependent on cost-intensive fertilization to ensure high yields. Sustainable practices should be pursued to ensure food security. Phaseolus vulgaris L. is one of the most produced legumes worldwide and may be an alternative to reduce the environmental impact of meat production as a reliable source of high-quality protein. Plant growth-promoting rhizobacteria (PGPR) are emerging as a sustainable option to increase agricultural production. To understand the dynamics between plants and microorganisms, the culturable microbiota of bean roots was isolated and identified at distinct stages of plant development (early and late vegetative growth, flowering, and pod) and root compartments (rhizoplane, endosphere, and nodules). Diversity and abundance of bacteria associated with root compartments differed throughout the plant life cycle. Bacterial plant growth promotion (PGP) and protection abilities (indole-3-acetic acid production, siderophore synthesis, and antifungal activity) were assessed and associated with plant phenology, demonstrating that among the bacteria associated with plant roots, several strains had an active role in the response to plant biological needs at each stage. Several strains stood out for their ability to display one or more PGP traits, being excellent candidates for efficient stage-specific biostimulants for application in precision agriculture.
- 24 December 2022
- Published by MDPI AG in Microorganisms
- Vol. 11 (1) , 57
Open AccessBacteria Associated with the Roots of Common Bean (Phaseolus vulgaris L.) at Different Development Stages: Diversity and Plant Growth Promotion
Current agricultural methodologies are vulnerable to erratic climate and are dependent on cost-intensive fertilization to ensure high yields. Sustainable practices should be pursued to ensure food security. Phaseolus vulgaris L. is one of the most produced legumes worldwide and may be an alternative to reduce the environmental impact of meat production as a reliable source of high-quality protein. Plant growth-promoting rhizobacteria (PGPR) are emerging as a sustainable option to increase agricultural production. To understand the dynamics between plants and microorganisms, the culturable microbiota of bean roots was isolated and identified at distinct stages of plant development (early and late vegetative growth, flowering, and pod) and root compartments (rhizoplane, endosphere, and nodules). Diversity and abundance of bacteria associated with root compartments differed throughout the plant life cycle. Bacterial plant growth promotion (PGP) and protection abilities (indole-3-acetic acid production, siderophore synthesis, and antifungal activity) were assessed and associated with plant phenology, demonstrating that among the bacteria associated with plant roots, several strains had an active role in the response to plant biological needs at each stage. Several strains stood out for their ability to display one or more PGP traits, being excellent candidates for efficient stage-specific biostimulants for application in precision agriculture.
- Open Access
- 18 March 2021
- Published by MDPI AG in Nanomaterials
- Vol. 11 (3) , 771
A Multifactorial Approach to Untangle Graphene Oxide (GO) Nanosheets Effects on Plants: Plant Growth-Promoting Bacteria Inoculation, Bacterial Survival, and Drought
Drought is a limiting factor for agricultural productivity. Climate change threatens to expand the areas of the globe subjected to drought, as well as to increase the severity and duration of water shortage. Plant growth-promoting bacteria (PGPB) are widely studied and applied as biostimulants to increase plant production and to enhance tolerance to abiotic and biotic constraints. Besides PGPB, studies on the potential of nanoparticles to be used as biostimulants are also thriving. However, many studies report toxicity of tested nanoparticles in bacteria and plants in laboratory conditions, but few studies have reported effects of nanoparticles towards bacterial cells and communities in the soil. The combined application of nanoparticles and PGPB as biostimulant formulations are poorly explored and it is important to unravel the potentialities of their combined application as a way to potentiate food production. In this study, Rhizobium sp. E20-8 and graphene oxide (GO) nanosheets were applied on container-grown maize seedlings in watered and drought conditions. Bacterial survival, seedling growth (dry weight), and biochemical endpoints (photosynthetic pigments, soluble and insoluble carbohydrates, proline, lipid peroxidation, protein, electron transport system, and superoxide dismutase) were evaluated. Results showed that the simultaneous exposure to GO and Rhizobium sp. E20-8 was able to alleviate the stress induced by drought on maize seedlings through osmotic and antioxidant protection by GO and mitigation of GO effects on the plant’s biochemistry by Rhizobium sp. E20-8. These results constitute a new lead on the development of biostimulant formulations to improve plant performance and increase food production in water-limited conditions.
- 18 March 2021
- Published by MDPI AG in Nanomaterials
- Vol. 11 (3) , 771
Open AccessA Multifactorial Approach to Untangle Graphene Oxide (GO) Nanosheets Effects on Plants: Plant Growth-Promoting Bacteria Inoculation, Bacterial Survival, and Drought
Drought is a limiting factor for agricultural productivity. Climate change threatens to expand the areas of the globe subjected to drought, as well as to increase the severity and duration of water shortage. Plant growth-promoting bacteria (PGPB) are widely studied and applied as biostimulants to increase plant production and to enhance tolerance to abiotic and biotic constraints. Besides PGPB, studies on the potential of nanoparticles to be used as biostimulants are also thriving. However, many studies report toxicity of tested nanoparticles in bacteria and plants in laboratory conditions, but few studies have reported effects of nanoparticles towards bacterial cells and communities in the soil. The combined application of nanoparticles and PGPB as biostimulant formulations are poorly explored and it is important to unravel the potentialities of their combined application as a way to potentiate food production. In this study, Rhizobium sp. E20-8 and graphene oxide (GO) nanosheets were applied on container-grown maize seedlings in watered and drought conditions. Bacterial survival, seedling growth (dry weight), and biochemical endpoints (photosynthetic pigments, soluble and insoluble carbohydrates, proline, lipid peroxidation, protein, electron transport system, and superoxide dismutase) were evaluated. Results showed that the simultaneous exposure to GO and Rhizobium sp. E20-8 was able to alleviate the stress induced by drought on maize seedlings through osmotic and antioxidant protection by GO and mitigation of GO effects on the plant’s biochemistry by Rhizobium sp. E20-8. These results constitute a new lead on the development of biostimulant formulations to improve plant performance and increase food production in water-limited conditions.