Arda Inanc
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Arda Inanc has a total of 26 co-authors. Here are the top co-authors by number of shared publications:
- Mehmet Naci Inci
Bogaziçi Univ. (Turkey)
3 shared publications Belkıs Gökbulut
Department of Physics, Bogazici University, Bebek, Istanbul, 34342, Turkey
2 shared publications- Ciler Celik-Ozenci
Department of Histology and Embryology, School of Medicine, Koc University, Istanbul, Turkey
2 shared publications - Gokhan Topcu
School of Chemistry, University of Leicester, Leicester LE1 7RH, UK
2 shared publications - Ibrahim Kecoglu
Department of Physics, Bogazici University
2 shared publications Mehmet Burcin Unlu
Ozyegin University
2 shared publications
Latest Publications
- Open Access
Coupling Raman Spectroscopy and Acoustic Microscopy to Characterize Glioblastoma Resistance
Therapy resistance in glioblastoma is usually described in genetic or metabolic terms. Here we ask whether it also has a measurable biophysical form. Combining Raman spectroscopy with scanning acoustic microscopy on TRAIL-sensitive and TRAIL-resistant glioblastoma cells, we find that resistance carries both a biochemical and a mechanical signature: the resistant cells differ at protein, lipid and nucleic-acid bands, contain 4.1-fold more neutral lipid, and hold a high acoustic impedance that does not change when the drug is applied, while sensitive cells stiffen as they die. Because acoustic impedance is an absolute quantity and neither measurement requires a label, the approach offers a route to recognising resistant populations from their physical state alone.
Open AccessCoupling Raman Spectroscopy and Acoustic Microscopy to Characterize Glioblastoma Resistance
Therapy resistance in glioblastoma is usually described in genetic or metabolic terms. Here we ask whether it also has a measurable biophysical form. Combining Raman spectroscopy with scanning acoustic microscopy on TRAIL-sensitive and TRAIL-resistant glioblastoma cells, we find that resistance carries both a biochemical and a mechanical signature: the resistant cells differ at protein, lipid and nucleic-acid bands, contain 4.1-fold more neutral lipid, and hold a high acoustic impedance that does not change when the drug is applied, while sensitive cells stiffen as they die. Because acoustic impedance is an absolute quantity and neither measurement requires a label, the approach offers a route to recognising resistant populations from their physical state alone.
- 29 April 2024
- Published by Optica Publishing Group in Biomedical Optics Express
- Vol. 15 (5) , 3441-3456
Label-free differentiation of functional zones in mature mouse placenta using micro-Raman imaging
In histopathology, it is highly crucial to have chemical and structural information about tissues. Additionally, the segmentation of zones within a tissue plays a vital role in investigating the functions of these regions for better diagnosis and treatment. The placenta plays a vital role in embryonic and fetal development and in diagnosing some diseases associated with its dysfunction. This study provides a label-free approach to obtain the images of mature mouse placenta together with the chemical differences between the tissue compartments using Raman spectroscopy. To generate the Raman images, spectra of placental tissue were collected using a custom-built optical setup. The pre-processed spectra were analyzed using statistical and machine learning methods to acquire the Raman maps. We found that the placental regions called decidua and the labyrinth zone are biochemically distinct from the junctional zone. A histologist performed a comparison and evaluation of the Raman map with histological images of the placental tissue, and they were found to agree. The results of this study show that Raman spectroscopy offers the possibility of label-free monitoring of the placental tissue from mature mice while simultaneously revealing crucial structural information about the zones.
- 29 April 2024
- Published by Optica Publishing Group in Biomedical Optics Express
- Vol. 15 (5) , 3441-3456
Label-free differentiation of functional zones in mature mouse placenta using micro-Raman imaging
In histopathology, it is highly crucial to have chemical and structural information about tissues. Additionally, the segmentation of zones within a tissue plays a vital role in investigating the functions of these regions for better diagnosis and treatment. The placenta plays a vital role in embryonic and fetal development and in diagnosing some diseases associated with its dysfunction. This study provides a label-free approach to obtain the images of mature mouse placenta together with the chemical differences between the tissue compartments using Raman spectroscopy. To generate the Raman images, spectra of placental tissue were collected using a custom-built optical setup. The pre-processed spectra were analyzed using statistical and machine learning methods to acquire the Raman maps. We found that the placental regions called decidua and the labyrinth zone are biochemically distinct from the junctional zone. A histologist performed a comparison and evaluation of the Raman map with histological images of the placental tissue, and they were found to agree. The results of this study show that Raman spectroscopy offers the possibility of label-free monitoring of the placental tissue from mature mice while simultaneously revealing crucial structural information about the zones.
- Open Access
Label-free differentiation of functional zones in mature mouse placenta using micro-Raman imaging
In histopathology, it is highly crucial to have chemical and structural information about tissues. Additionally, the segmentation of zones within a tissue plays an important role in investigating the functions of these regions for better diagnosis and treatment. The placenta plays an important role in embryonic and fetal development and in the diagnosis of some diseases associated with its dysfunction. This study provides a label-free approach to obtain the images of mature mouse placenta together with the chemical differences between the tissue compartments using Raman spectroscopy. To generate the Raman images, spectra of placental tissue were collected using a custom-built optical setup. The pre-processed spectra were analyzed using statistical and machine learning methods to acquire the Raman maps. We found that the placental regions called decidua and the labyrinth zone are biochemically distinct from the junctional zone. Comparison and evaluation of the Raman maps with histological images of the placental tissue were performed by a histologist and they are found to be in agreement. The results of this study show that Raman spectroscopy offers the possibility of label-free monitoring of the placental tissue from mature mice while revealing important structural information about the zones at the same time.
Open AccessLabel-free differentiation of functional zones in mature mouse placenta using micro-Raman imaging
In histopathology, it is highly crucial to have chemical and structural information about tissues. Additionally, the segmentation of zones within a tissue plays an important role in investigating the functions of these regions for better diagnosis and treatment. The placenta plays an important role in embryonic and fetal development and in the diagnosis of some diseases associated with its dysfunction. This study provides a label-free approach to obtain the images of mature mouse placenta together with the chemical differences between the tissue compartments using Raman spectroscopy. To generate the Raman images, spectra of placental tissue were collected using a custom-built optical setup. The pre-processed spectra were analyzed using statistical and machine learning methods to acquire the Raman maps. We found that the placental regions called decidua and the labyrinth zone are biochemically distinct from the junctional zone. Comparison and evaluation of the Raman maps with histological images of the placental tissue were performed by a histologist and they are found to be in agreement. The results of this study show that Raman spectroscopy offers the possibility of label-free monitoring of the placental tissue from mature mice while revealing important structural information about the zones at the same time.
- 23 July 2019
- Published by American Chemical Society (ACS) in The Journal of Physical Chemistry C
- Vol. 123 (32) , 19862-19870
Enhanced Spontaneous Emission Rate in a Low-Q Hybrid Photonic-Plasmonic Nanoresonator
- 23 July 2019
- Published by American Chemical Society (ACS) in The Journal of Physical Chemistry C
- Vol. 123 (32) , 19862-19870
Enhanced Spontaneous Emission Rate in a Low-Q Hybrid Photonic-Plasmonic Nanoresonator
- 1 June 2018
- Published by Elsevier in Optics and Lasers in Engineering
- Vol. 105, 14-26
3-D optical profilometry at micron scale with multi-frequency fringe projection using modified fibre optic Lloyd’s mirror technique
- 1 June 2018
- Published by Elsevier in Optics and Lasers in Engineering
- Vol. 105, 14-26
3-D optical profilometry at micron scale with multi-frequency fringe projection using modified fibre optic Lloyd’s mirror technique