Dina Lida Gutiérrez Reynoso

Given their ability to attack and eliminate insects that impact various ecosystems, entomopathogenic nematodes (EPNs) are considered effective biological pest control agents. However, there are few studies focused on their identification or their association with forest species such as the carob tree. The objective of the present study was to isolate and molecularly identify entomopathogenic nematodes from carob tree (Neltuma spp.) forests in Tumbes, Peru. One-kilogram soil samples were collected from ten localities located across four districts in the Tumbes region. In each soil sample, Galleria mellonella Linnaeus 1758 (Lepidoptera: Pyralidae) larvae were exposed as bait for the detection and isolation of EPNs. Exposure times were controlled at 12, 24, 48, 72, and 84-96 hours. The isolated nematodes were morphologically characterized, and their genomic DNA was extracted. The 18S ribosomal DNA (rDNA) gene was amplified via polymerase chain reaction (PCR). Six of the ten evaluated soils showed G. mellonella infection, with a positive correlation between exposure time and infection rate. However, due to marked infectivity divergences (where samples 02 and 06 exhibited the highest percentages), three representative strains were selectively isolated from soil samples 02, 05, and 06. Subsequent morphological characterization and molecular identification determined their taxonomic identity as Heterorhabditis bacteriophora and Heterorhabditis indica. This finding represents the first report of EPNs associated with carob tree plantations in northern Peru and highlights their pathogenic potential against insect larvae. It is recommended that the nematodes identified at the species level be considered in integrated pest management (IPM) programs.

Capsicum pubescens (rocoto) is an Andean domesticate with notable agronomic and nutraceutical potential, yet it remains underrepresented in chili pepper breeding programs. In this study, 78 accessions from the Peruvian Andes were evaluated in a single field environment during the 2024 growing season for 28 variables spanning plant architecture, phenology and yield, color (CIELAB), weight, fruit morphology, physicochemical variables, and functional phytochemicals, including total phenolics, carotenoids, ascorbic acid, capsaicinoids, and antioxidant activity (FRAP, DPPH, ABTS). Descriptive analyses revealed broad phenotypic diversity in key variables such as yield and bioactive compounds. Spearman correlations uncovered a clear modular structure, with strong within-domain associations across morphological, chromatic, and biochemical variables, and statistically significant but low-magnitude cross-domain associations (e.g., fruit length with pungency, redness with total phenolics). Principal component analysis and hierarchical clustering resolved three differentiated phenotypic profiles: (i) low-pungency accessions with high soluble solids and varied fruit colors; (ii) highly pungent materials with elevated antioxidant capacity; and (iii) large, red-fruited accessions with considerable carotenoid content and high moisture. This multivariate architecture revealed weak cross-block correlations among agronomic, color, and functional traits, enabling selection of promising accessions combining desirable agronomic attributes and favorable bioactive profiles in specific accessions. These results provide a quantitative foundation for future breeding strategies in C. pubescens, opening concrete opportunities to develop improved cultivars that simultaneously meet productivity and functional quality criteria.

Mineral composition modulates plant health, agro-morphological attributes, and functional quality in coffee, yet large-scale evaluations remain limited. In 150 Coffea arabica L. accessions, we quantified grain minerals (Ca, K, Mg, Na, P, Zn, Cu, Fe, Mn); resistance to coffee leaf miner (CLM), coffee berry borer (CBB), and coffee leaf rust (CLR); agro-morphological traits; bioactive compounds (phenolics, flavonoids, chlorogenic acid, trigonelline, caffeine); and antioxidant capacity (ABTS, DPPH, FRAP). Mn and Zn were associated with greater resistance to CBB and CLM, whereas P and Ca related with lower susceptibility to CLR; a P–Zn antagonism emerged as a critical nutritional axis. Phosphorus was linked to larger size and higher 100-bean mass; Ca and Mg to greater fruit number and fruit mass per plant; and Fe to improved filling and higher 100-bean mass in parchment coffee. For bioactive compounds, P and K were positively associated with total phenolics, total flavonoids, caffeine, and ABTS/FRAP antioxidant activity, while trigonelline and chlorogenic acid correlated positively with the micronutrients Zn, Cu, and Fe. Cluster analysis resolved groups associated with resistance, Zn/Fe biofortification, productivity, and functional quality. PER1002287, PER1002216, PER1002207, and PER1002197 emerged as promising accessions balancing plant health, yield, and phytochemical quality. Overall, grain mineral composition is linked to plant health, productivity, and functional quality in coffee, providing a foundation for precision nutrient management and breeding programs aimed at resilient and high–value-added coffee.

Grapevines face the dual challenge of sustaining yield and fruit quality under arid and increasingly variable environmental conditions. This study characterized the phenotypic variability and multi-year stability of 49 grapevine (Vitis spp.) accessions conserved in the Chincha germplasm bank over three consecutive growing seasons, with the aim of identifying promising material for table grape, pisco (a traditional grape-based distilled spirit from Peru), and wine production. Morphological traits (cluster weight, berry weight and dimensions), colorimetric parameters (CIELAB), and physicochemical attributes (moisture, dry matter, soluble solids, pH, titratable acidity, maturity index, and reducing sugars) were evaluated. Multivariate analyses (PCA, hierarchical clustering), genotype × environment interaction models (AMMI and GGE), stability indices (ASV and WAASBY), and assessments of interannual stability were applied, together with a multi-criteria selection index tailored to the intended end use. The results revealed two contrasting phenotypic profiles: one characterized by high berry volume/weight and elevated water content and another with smaller berries but higher dry matter, sugars, balanced acidity, and superior maturity indices. Genotypic effects were predominant for size-related traits such as berry weight, whereas titratable acidity and reducing sugars exhibited a more pronounced genotype × year interaction, supporting the use of AMMI models and the WAASBY index to select genotypes that are both productive and stable. The ranking identified accessions PER1002061, PER1002062, and PER1002168 as outstanding candidates for table grape production; PER1002076, PER1002097, and PER1002156 for pisco; and PER1002122, PER1002131, PER1002135, and PER1002098 as accessions with high oenological potential. Overall, these findings highlight the value and diversity of Peruvian grapevine germplasm and provide a foundation for breeding programs targeting varieties adapted to specific market niches, including table grape, wine, and pisco.

Coffee quality arises from the interaction among genotype, environment, and postharvest management, yet few large-scale studies jointly integrate agronomic, phytochemical, and processing traits. We characterized 150 Coffea arabica L. accessions from six Peruvian regions, evaluated in the INIA coffee germplasm collection, quantifying agro-morphological traits, colorimetric parameters in cherries and beans, fermentation indicators, bioactive compounds, and antioxidant activity. Correlation analyses showed that total phenolics (TPCs) and total flavonoids (TFCs) were strongly associated with antioxidant activity, whereas caffeine content (CAF) varied, largely independently. Several chromatic parameters in parchment and green coffee (a*, b*, C*) showed positive correlations with phenolic content and antioxidant activity (ABTS, DPPH, FRAP), while final fermentation pH (FPH) was negatively associated with these compounds, supporting both color metrics and pH as operational indicators of chemical quality. Principal component analysis disentangled a morphometric gradient from a functional (phenolic–antioxidant) gradient, indicating that bean size and antioxidant potential can be improved in a semi-independent manner. Hierarchical clustering identified complementary ideotypes, and a multi-trait selection index highlighted promising accessions—PER1002197 (Cajamarca), PER1002222 (Cajamarca), PER1002288 (Pasco), and PER1002184 (Cajamarca)—that combine high phenolic/antioxidant levels, favorable chlorogenic acid (CGA)/trigonelline (TGN) profiles, contrasting (high/low) caffeine, and competitive yield (YPP)/bean size. These accessions represent promising candidates for breeding climate-smart and nutraceutical-oriented coffee.

Tomato susceptibility/resistance to stem canker disease caused by Alternaria alternata f. sp. lycopersici and its pathogenic factor AAL-toxin is determined by the presence of the Asc1 gene. Several cultivars of commercial tomato (Solanum lycopersicum var. lycopersicum, SLL) are reported to have a mutation in Asc1, resulting in their susceptibility to AAL-toxin. We evaluated 119 ancestral tomato accessions including S. pimpinellifolium (SP), S. lycopersicum var. cerasiforme (SLC) and S. lycopersicum var. lycopersicum “jitomate criollo” (SLJ) for AAL-toxin susceptibility. Three accessions, SP PER018805, SLC PER018894, and SLJ M5-3, were susceptible to AAL-toxin. SLC PER018894 and SLJ M5-3 had a two-nucleotide deletion (nt 854_855del) in Asc1 identical to that found in SLL cv. Aichi-first. Another mutation (nt 931_932insT) that may confer AAL-toxin susceptibility was identified in SP PER018805. In the phylogenetic tree based on the 18 COSII sequences, a clade (S3) is composed of SP, including the AAL-toxin susceptible PER018805, and SLC. AAL-toxin susceptible SLC PER018894 and SLJ M5-3 were in Clade S2 with SLL cultivars. As SLC is thought to be the ancestor of SLL, and SLJ is an intermediate tomato between SLC and SLL, Asc1s with/without the mutation seem to have been inherited throughout the history of tomato domestication and breeding.

The domestic South American camelid Vicugna pacos L. is distributed along Peru, Chile, Bolivia, and Argentina. Here, we contribute to the bioinformatics and evolutionary systematics of the Camelidae by performing high-throughput sequencing analysis on the black Huacaya breed of V. pacos from Puno, Peru. The black Huacaya breed mitogenome is 16,664 base pairs (bp) in length and contains 37 genes (GenBank accession MT044302). The mitogenome shares a high-level of gene synteny to other Camelidae (Camelops, Camelus, Lama, and Vicugna). The mitogenome of the black Huacaya breed of V. pacos situates it in a clade with V. vicugna Molina, sister to Lama. We anticipate that further mitogenome sequencing of different breeds from Vicugna pacos will improve our understanding of the evolutionary history of this taxon.

The 5.5-Mb genome sequence of Bacillus thuringiensis strain UNMSM10RA, isolated from potato crop soil, is reported in this study. The strain UNMSM10RA contains 5,347 protein-coding sequences, 105 tRNA genes, 15 rRNA genes, and 5 noncoding RNA (ncRNA) genes, with an average G+C content of 35.1%.