Kari Skjånes
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Kari Skjånes has a total of 39 co-authors. Here are the top co-authors by number of shared publications:
- Bente Edvardsen
Department of Biosciences, University of Oslo, Oslo, Norway
3 shared publications - Ethan Wood
Norwegian Institute for Water Research (NIVA), Oslo, Norway
3 shared publications - Luka Šupraha
Norwegian Institute for Water Research (NIVA), Oslo, Norway
3 shared publications - Filipa Rosa
Division of Biotechnology and Plant Health, Norwegian Institute of Bioeconomy Research (NIBIO), NO-1431 Ås, Norway
2 shared publications - Giorgia Carnovale
Division of Biotechnology and Plant Health, Norwegian Institute of Bioeconomy Research (NIBIO), NO-1431 Ås, Norway
2 shared publications - Svein Jarle Horn
Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
2 shared publications
Latest Publications
- Open Access
- 22 July 2026
- Published by Springer Nature in Microbial Ecology
- Vol. 89 (1)
Effects of Culture History and Algal Taxonomy on Bacterial Communities in Long-maintained Filamentous Green Algae
Algal cultures are widely used to study algae–bacteria interactions, yet the relative roles of algal taxonomy, culturing environment, and historical contingency in shaping bacterial communities of long-maintained monoalgal cultures remain unclear. In a two-stage experimental design, we used 16 S rRNA metabarcoding to first profile the bacterial communities of 14 filamentous freshwater algal strains from three orders (Chaetophorales, Oedogoniales, Zygnematales) maintained in two distinct culture collections, and then, in a second experiment to test community mixing using a co-culture and re-isolation design with two algal strains ( Stigeoclonium sp. and Oedogonium sp.). The 14-strain profiling showed that bacterial communities were broadly similar at higher taxonomic ranks, with many shared orders within Pseudomonadota, whereas composition at the ASV level was largely algal-strain-specific. Ordination of phylogeny-aware UniFrac distances showed that culture collection of origin explained more variation in community composition than algal order, an effect reduced but not eliminated after standardizing the culture medium. The co-culture and re-isolation experiment showed that the two algal strains exchanged many bacterial community members, yet algal strain identity remained detectable after re-isolation. These results support a framework where culture history results in strain-specific ASV-level composition within recurrent higher-rank structure, and where algal-strain-specific effects on bacterial community composition become evident when cultures are exposed to a shared bacterial pool. Co-culture followed by algal re-isolation offers a practical approach to examine the persistence of algal-culture bacterial communities under mixing and may help identify candidate bacterial partners with potentially strong host-specific interactions without requiring axenic hosts.
- 22 July 2026
- Published by Springer Nature in Microbial Ecology
- Vol. 89 (1)
Open AccessEffects of Culture History and Algal Taxonomy on Bacterial Communities in Long-maintained Filamentous Green Algae
Algal cultures are widely used to study algae–bacteria interactions, yet the relative roles of algal taxonomy, culturing environment, and historical contingency in shaping bacterial communities of long-maintained monoalgal cultures remain unclear. In a two-stage experimental design, we used 16 S rRNA metabarcoding to first profile the bacterial communities of 14 filamentous freshwater algal strains from three orders (Chaetophorales, Oedogoniales, Zygnematales) maintained in two distinct culture collections, and then, in a second experiment to test community mixing using a co-culture and re-isolation design with two algal strains ( Stigeoclonium sp. and Oedogonium sp.). The 14-strain profiling showed that bacterial communities were broadly similar at higher taxonomic ranks, with many shared orders within Pseudomonadota, whereas composition at the ASV level was largely algal-strain-specific. Ordination of phylogeny-aware UniFrac distances showed that culture collection of origin explained more variation in community composition than algal order, an effect reduced but not eliminated after standardizing the culture medium. The co-culture and re-isolation experiment showed that the two algal strains exchanged many bacterial community members, yet algal strain identity remained detectable after re-isolation. These results support a framework where culture history results in strain-specific ASV-level composition within recurrent higher-rank structure, and where algal-strain-specific effects on bacterial community composition become evident when cultures are exposed to a shared bacterial pool. Co-culture followed by algal re-isolation offers a practical approach to examine the persistence of algal-culture bacterial communities under mixing and may help identify candidate bacterial partners with potentially strong host-specific interactions without requiring axenic hosts.
- Open Access
- 18 March 2026
- Published by Elsevier in Algal Research
- Vol. 95
Phycosphere microbiome succession tracks algal growth dynamics during phosphorus-limited wastewater treatment
- 18 March 2026
- Published by Elsevier in Algal Research
- Vol. 95
Open AccessPhycosphere microbiome succession tracks algal growth dynamics during phosphorus-limited wastewater treatment
- Open Access
- 7 February 2025
- Published by Springer Nature in Journal of Applied Phycology
- Vol. 37 (2) , 837-853
Phycosphere of an algal co-culture phycoremediation system: Stability of bacterial communities in an Oedogonium-Stigeoclonium co-culture during cultivation in microbially rich wastewater
Algal-based wastewater remediation systems (phycoremediation) include phycosphere bacterial communities that influence algal growth, pollutant remediation, and downstream applications of biomass as fertilizers or bio-stimulants. This study investigated the bacterial community dynamics in a novel phycoremediation system using a co-culture of the green algae Stigeoclonium sp. and Oedogonium vaucheri. Bacterial abundance was estimated using flow cytometry (FCM), while community composition was assessed through 16S rRNA gene metabarcoding. Additionally, 28 bacterial strains were isolated from the bioremediation experiment, cultured, genetically characterized for identification and screened for production of the auxin phytohormone indole-3-acetic acid (IAA). Metabarcoding showed that the free-living bacterial community consisted of bacteria from both the wastewater effluent and the algal inocula, while the attached phycosphere community was dominated by bacteria from the algal inocula, indicating the stability of the algae-associated phycosphere. Taxa known to include plant growth-promoting bacteria (PGPB) were abundant, and several strains produced IAA. The bacterial community composition, combined with the potential production of phytohormone by isolated bacteria indicates symbiotic or commensal algae-microbe interactions within the phycosphere bacterial communities. Sterile filtration of wastewater effluent, including only the algal inoculum bacterial communities, reduced algal biomass production and increased bacterial abundance. This study highlights the critical role of microbial interactions in engineered ecosystems and provides insights for optimizing algal-based wastewater treatment technologies.
- 7 February 2025
- Published by Springer Nature in Journal of Applied Phycology
- Vol. 37 (2) , 837-853
Open AccessPhycosphere of an algal co-culture phycoremediation system: Stability of bacterial communities in an Oedogonium-Stigeoclonium co-culture during cultivation in microbially rich wastewater
Algal-based wastewater remediation systems (phycoremediation) include phycosphere bacterial communities that influence algal growth, pollutant remediation, and downstream applications of biomass as fertilizers or bio-stimulants. This study investigated the bacterial community dynamics in a novel phycoremediation system using a co-culture of the green algae Stigeoclonium sp. and Oedogonium vaucheri. Bacterial abundance was estimated using flow cytometry (FCM), while community composition was assessed through 16S rRNA gene metabarcoding. Additionally, 28 bacterial strains were isolated from the bioremediation experiment, cultured, genetically characterized for identification and screened for production of the auxin phytohormone indole-3-acetic acid (IAA). Metabarcoding showed that the free-living bacterial community consisted of bacteria from both the wastewater effluent and the algal inocula, while the attached phycosphere community was dominated by bacteria from the algal inocula, indicating the stability of the algae-associated phycosphere. Taxa known to include plant growth-promoting bacteria (PGPB) were abundant, and several strains produced IAA. The bacterial community composition, combined with the potential production of phytohormone by isolated bacteria indicates symbiotic or commensal algae-microbe interactions within the phycosphere bacterial communities. Sterile filtration of wastewater effluent, including only the algal inoculum bacterial communities, reduced algal biomass production and increased bacterial abundance. This study highlights the critical role of microbial interactions in engineered ecosystems and provides insights for optimizing algal-based wastewater treatment technologies.
- Open Access
Starch-Rich Microalgae as an Active Ingredient in Beer Brewing
Microalgal biomass is widely studied for its possible application in food and human nutrition due to its multiple potential health benefits, and to address raising sustainability concerns. An interesting field whereby to further explore the application of microalgae is that of beer brewing, due to the capacity of some species to accumulate large amounts of starch under specific growth conditions. The marine species Tetraselmis chui is a well-known starch producer, and was selected in this study for the production of biomass to be explored as an active ingredient in beer brewing. Cultivation was performed under nitrogen deprivation in 250 L tubular photobioreactors, producing a biomass containing 50% starch. The properties of high-starch microalgal biomass in a traditional mashing process were then assessed to identify critical steps and challenges, test the efficiency of fermentable sugar release, and develop a protocol for small-scale brewing trials. Finally, T. chui was successfully integrated at a small scale into the brewing process as an active ingredient, producing microalgae-enriched beer containing up to 20% algal biomass. The addition of microalgae had a noticeable effect on the beer properties, resulting in a product with distinct sensory properties. Regulation of pH proved to be a key parameter in the process.
Open AccessStarch-Rich Microalgae as an Active Ingredient in Beer Brewing
Microalgal biomass is widely studied for its possible application in food and human nutrition due to its multiple potential health benefits, and to address raising sustainability concerns. An interesting field whereby to further explore the application of microalgae is that of beer brewing, due to the capacity of some species to accumulate large amounts of starch under specific growth conditions. The marine species Tetraselmis chui is a well-known starch producer, and was selected in this study for the production of biomass to be explored as an active ingredient in beer brewing. Cultivation was performed under nitrogen deprivation in 250 L tubular photobioreactors, producing a biomass containing 50% starch. The properties of high-starch microalgal biomass in a traditional mashing process were then assessed to identify critical steps and challenges, test the efficiency of fermentable sugar release, and develop a protocol for small-scale brewing trials. Finally, T. chui was successfully integrated at a small scale into the brewing process as an active ingredient, producing microalgae-enriched beer containing up to 20% algal biomass. The addition of microalgae had a noticeable effect on the beer properties, resulting in a product with distinct sensory properties. Regulation of pH proved to be a key parameter in the process.
- Open Access
- 26 April 2022
- Published by Elsevier in Bioresource Technology
- Vol. 354, 127222
Metabolic pathways for biosynthesis and degradation of starch in Tetraselmis chui during nitrogen deprivation and recovery
- 26 April 2022
- Published by Elsevier in Bioresource Technology
- Vol. 354, 127222
Open AccessMetabolic pathways for biosynthesis and degradation of starch in Tetraselmis chui during nitrogen deprivation and recovery
- Open Access
Protein Enrichment of Wheat Bread with Microalgae: Microchloropsis gaditana, Tetraselmis chui and Chlorella vulgaris
Cell wall disrupted and dried Microchloropsis gaditana (Mg), Tetraselmis chui (Tc) and Chlorella vulgaris (Cv) microalgae biomasses, with or without ethanol pre-treatment, were added to wheat bread at a wheat flour substitution level of 12%, to enrich bread protein by 30%. Baking performance, protein quality and basic sensory properties were assessed. Compared to wheat, Mg, Tc and Cv contain higher amounts of essential amino acids and their incorporation markedly improved protein quality in the bread (DIAAS 57–66 vs. 46%). The incorporation of microalgae reduced dough strength and bread volume and increased crumb firmness. This was most pronounced for Cv and Tc but could be improved by ethanol treatment. Mg gave adequate dough strength, bread volume and crumb structure without ethanol treatment. To obtain bread of acceptable smell, appearance, and colour, ethanol treatment was necessary also for Mg as it markedly reduced the unpleasant smell and intense colour of all algae breads. Ethanol treatment reduced the relative content of lysine, but no other essential amino acids. However, it also had a negative impact on in vitro protein digestibility. Our results show that Mg had the largest potential for protein fortification of bread, but further work is needed to optimize pre-processing and assess consumer acceptance.
Open AccessProtein Enrichment of Wheat Bread with Microalgae: Microchloropsis gaditana, Tetraselmis chui and Chlorella vulgaris
Cell wall disrupted and dried Microchloropsis gaditana (Mg), Tetraselmis chui (Tc) and Chlorella vulgaris (Cv) microalgae biomasses, with or without ethanol pre-treatment, were added to wheat bread at a wheat flour substitution level of 12%, to enrich bread protein by 30%. Baking performance, protein quality and basic sensory properties were assessed. Compared to wheat, Mg, Tc and Cv contain higher amounts of essential amino acids and their incorporation markedly improved protein quality in the bread (DIAAS 57–66 vs. 46%). The incorporation of microalgae reduced dough strength and bread volume and increased crumb firmness. This was most pronounced for Cv and Tc but could be improved by ethanol treatment. Mg gave adequate dough strength, bread volume and crumb structure without ethanol treatment. To obtain bread of acceptable smell, appearance, and colour, ethanol treatment was necessary also for Mg as it markedly reduced the unpleasant smell and intense colour of all algae breads. Ethanol treatment reduced the relative content of lysine, but no other essential amino acids. However, it also had a negative impact on in vitro protein digestibility. Our results show that Mg had the largest potential for protein fortification of bread, but further work is needed to optimize pre-processing and assess consumer acceptance.
- Open Access
- 28 September 2021
- Published by MDPI AG in Applied Sciences
- Vol. 11 (19) , 9025
Starch Rich Chlorella vulgaris: High-Throughput Screening and Up-Scale for Tailored Biomass Production
The use of microalgal starch has been studied in biorefinery frameworks to produce bioethanol or bioplastics, however, these products are currently not economically viable. Using starch-rich biomass as an ingredient in food applications is a novel way to create more value while expanding the product portfolio of the microalgal industry. Optimization of starch production in the food-approved species Chlorella vulgaris was the main objective of this study. High-throughput screening of biomass composition in response to multiple stressors was performed with FTIR spectroscopy. Nitrogen starvation was identified as an important factor for starch accumulation. Moreover, further studies were performed to assess the role of light distribution, investigating the role of photon supply rates in flat panel photobioreactors. Starch-rich biomass with up to 30% starch was achieved in cultures with low inoculation density (0.1 g L−1) and high irradiation (1800 µmol m−2 s−1). A final large-scale experiment was performed in 25 L tubular reactors, achieving a maximum of 44% starch in the biomass after 12 h in nitrogen starved conditions.
- 28 September 2021
- Published by MDPI AG in Applied Sciences
- Vol. 11 (19) , 9025
Open AccessStarch Rich Chlorella vulgaris: High-Throughput Screening and Up-Scale for Tailored Biomass Production
The use of microalgal starch has been studied in biorefinery frameworks to produce bioethanol or bioplastics, however, these products are currently not economically viable. Using starch-rich biomass as an ingredient in food applications is a novel way to create more value while expanding the product portfolio of the microalgal industry. Optimization of starch production in the food-approved species Chlorella vulgaris was the main objective of this study. High-throughput screening of biomass composition in response to multiple stressors was performed with FTIR spectroscopy. Nitrogen starvation was identified as an important factor for starch accumulation. Moreover, further studies were performed to assess the role of light distribution, investigating the role of photon supply rates in flat panel photobioreactors. Starch-rich biomass with up to 30% starch was achieved in cultures with low inoculation density (0.1 g L−1) and high irradiation (1800 µmol m−2 s−1). A final large-scale experiment was performed in 25 L tubular reactors, achieving a maximum of 44% starch in the biomass after 12 h in nitrogen starved conditions.
- Open Access
- 3 June 2021
- Published by Wiley in Physiologia Plantarum
- Vol. 173 (2) , 612-623
Bioactive peptides from microalgae: Focus on anti‐cancer and immunomodulating activity
In addition to the rapidly expanding field of using microalgae for food and feed, microalgae represent a tremendous potential for new bioactive compounds with health‐promoting effects. One field where new therapeutics is needed is cancer therapy. As cancer therapy often cause severe side effects and loose effect due to development of drug resistance, new therapeutic agents are needed. Treating cancer by modulating the immune response using peptides has led to unprecedented responses in patients. In this review, we want to elucidate the potential for microalgae as a source of new peptides for possible use in cancer management. Among the limited studies on anti‐cancer effects of peptides, positive results were found in a total of six different forms of cancer. The majority of studies have been performed with different strains of Chlorella, but effects have also been found using peptides from other species. This is also the case for peptides with immunomodulating effects and peptides with other health‐promoting effects (e.g., role in cardiovascular diseases). However, the active peptide sequence has been determined in only half of the studies. In many cases, the microalga strain and the cultivation conditions used for producing the algae have not been reported. The low number of species that have been explored, as opposed to the large number of species available, is a clear indication that the potential for new discoveries is large. Additionally, the availability and cost‐effectiveness of microalgae make them attractive in the search for bioactive peptides to prevent cancer.
- 3 June 2021
- Published by Wiley in Physiologia Plantarum
- Vol. 173 (2) , 612-623
Open AccessBioactive peptides from microalgae: Focus on anti‐cancer and immunomodulating activity
In addition to the rapidly expanding field of using microalgae for food and feed, microalgae represent a tremendous potential for new bioactive compounds with health‐promoting effects. One field where new therapeutics is needed is cancer therapy. As cancer therapy often cause severe side effects and loose effect due to development of drug resistance, new therapeutic agents are needed. Treating cancer by modulating the immune response using peptides has led to unprecedented responses in patients. In this review, we want to elucidate the potential for microalgae as a source of new peptides for possible use in cancer management. Among the limited studies on anti‐cancer effects of peptides, positive results were found in a total of six different forms of cancer. The majority of studies have been performed with different strains of Chlorella, but effects have also been found using peptides from other species. This is also the case for peptides with immunomodulating effects and peptides with other health‐promoting effects (e.g., role in cardiovascular diseases). However, the active peptide sequence has been determined in only half of the studies. In many cases, the microalga strain and the cultivation conditions used for producing the algae have not been reported. The low number of species that have been explored, as opposed to the large number of species available, is a clear indication that the potential for new discoveries is large. Additionally, the availability and cost‐effectiveness of microalgae make them attractive in the search for bioactive peptides to prevent cancer.
- Open Access
- 6 July 2019
- Published by MDPI AG in Antioxidants
- Vol. 8 (7) , 209
First Apocarotenoids Profiling of Four Microalgae Strains
Both enzymatic or oxidative carotenoids cleavages can often occur in nature and produce a wide range of bioactive apocarotenoids. Considering that no detailed information is available in the literature regarding the occurrence of apocarotenoids in microalgae species, the aim of this study was to study the extraction and characterization of apocarotenoids in four different microalgae strains: Chlamydomonas sp. CCMP 2294, Tetraselmis chuii SAG 8-6, Nannochloropsis gaditana CCMP 526, and Chlorella sorokiniana NIVA-CHL 176. This was done for the first time using an online method coupling supercritical fluid extraction and supercritical fluid chromatography tandem mass spectrometry. A total of 29 different apocarotenoids, including various apocarotenoid fatty acid esters, were detected: apo-12’-zeaxanthinal, β-apo-12’-carotenal, apo-12-luteinal, and apo-12’-violaxanthal. These were detected in all the investigated strains together with the two apocarotenoid esters, apo-10’-zeaxanthinal-C4:0 and apo-8’-zeaxanthinal-C8:0. The overall extraction and detection time for the apocarotenoids was less than 10 min, including apocarotenoids esters, with an overall analysis time of less than 20 min. Moreover, preliminary quantitative data showed that the β-apo-8’-carotenal content was around 0.8% and 2.4% of the parent carotenoid, in the C. sorokiniana and T. chuii strains, respectively. This methodology could be applied as a selective and efficient method for the apocarotenoids detection.
- 6 July 2019
- Published by MDPI AG in Antioxidants
- Vol. 8 (7) , 209
Open AccessFirst Apocarotenoids Profiling of Four Microalgae Strains
Both enzymatic or oxidative carotenoids cleavages can often occur in nature and produce a wide range of bioactive apocarotenoids. Considering that no detailed information is available in the literature regarding the occurrence of apocarotenoids in microalgae species, the aim of this study was to study the extraction and characterization of apocarotenoids in four different microalgae strains: Chlamydomonas sp. CCMP 2294, Tetraselmis chuii SAG 8-6, Nannochloropsis gaditana CCMP 526, and Chlorella sorokiniana NIVA-CHL 176. This was done for the first time using an online method coupling supercritical fluid extraction and supercritical fluid chromatography tandem mass spectrometry. A total of 29 different apocarotenoids, including various apocarotenoid fatty acid esters, were detected: apo-12’-zeaxanthinal, β-apo-12’-carotenal, apo-12-luteinal, and apo-12’-violaxanthal. These were detected in all the investigated strains together with the two apocarotenoid esters, apo-10’-zeaxanthinal-C4:0 and apo-8’-zeaxanthinal-C8:0. The overall extraction and detection time for the apocarotenoids was less than 10 min, including apocarotenoids esters, with an overall analysis time of less than 20 min. Moreover, preliminary quantitative data showed that the β-apo-8’-carotenal content was around 0.8% and 2.4% of the parent carotenoid, in the C. sorokiniana and T. chuii strains, respectively. This methodology could be applied as a selective and efficient method for the apocarotenoids detection.
- Open Access
- 27 January 2016
- Published by Springer Nature in Journal of Applied Phycology
- Vol. 28 (4) , 2205-2223
Design and construction of a photobioreactor for hydrogen production, including status in the field
Several species of microalgae and phototrophic bacteria are able to produce hydrogen under certain conditions. A range of different photobioreactor systems have been used by different research groups for lab-scale hydrogen production experiments, and some few attempts have been made to upscale the hydrogen production process. Even though a photobioreactor system for hydrogen production does require special construction properties (e.g., hydrogen tight, mixing by other means than bubbling with air), only very few attempts have been made to design photobioreactors specifically for the purpose of hydrogen production. We have constructed a flat panel photobioreactor system that can be used in two modes: either for the cultivation of phototrophic microorganisms (upright and bubbling) or for the production of hydrogen or other anaerobic products (mixing by “rocking motion”). Special emphasis has been taken to avoid any hydrogen leakages, both by means of constructional and material choices. The flat plate photobioreactor system is controlled by a custom-built control system that can log and control temperature, pH, and optical density and additionally log the amount of produced gas and dissolved oxygen concentration. This paper summarizes the status in the field of photobioreactors for hydrogen production and describes in detail the design and construction of a purpose-built flat panel photobioreactor system, optimized for hydrogen production in terms of structural functionality, durability, performance, and selection of materials. The motivations for the choices made during the design process and advantages/disadvantages of previous designs are discussed.
- 27 January 2016
- Published by Springer Nature in Journal of Applied Phycology
- Vol. 28 (4) , 2205-2223
Open AccessDesign and construction of a photobioreactor for hydrogen production, including status in the field
Several species of microalgae and phototrophic bacteria are able to produce hydrogen under certain conditions. A range of different photobioreactor systems have been used by different research groups for lab-scale hydrogen production experiments, and some few attempts have been made to upscale the hydrogen production process. Even though a photobioreactor system for hydrogen production does require special construction properties (e.g., hydrogen tight, mixing by other means than bubbling with air), only very few attempts have been made to design photobioreactors specifically for the purpose of hydrogen production. We have constructed a flat panel photobioreactor system that can be used in two modes: either for the cultivation of phototrophic microorganisms (upright and bubbling) or for the production of hydrogen or other anaerobic products (mixing by “rocking motion”). Special emphasis has been taken to avoid any hydrogen leakages, both by means of constructional and material choices. The flat plate photobioreactor system is controlled by a custom-built control system that can log and control temperature, pH, and optical density and additionally log the amount of produced gas and dissolved oxygen concentration. This paper summarizes the status in the field of photobioreactors for hydrogen production and describes in detail the design and construction of a purpose-built flat panel photobioreactor system, optimized for hydrogen production in terms of structural functionality, durability, performance, and selection of materials. The motivations for the choices made during the design process and advantages/disadvantages of previous designs are discussed.