J. Tomasz Giermakowski
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Research Interests
J. Tomasz Giermakowski has a total of 72 co-authors. Here are the top co-authors by number of shared publications:
- Mason J. Ryan
Arizona Game and Fish Department, Phoenix, USA
5 shared publications - Gerardo Suzán
Departamento de Etología, Fauna Silvestre y Animales de Laboratorio, Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Ciudad de México, México
3 shared publications Blas Armién
Affiliation Instituto Conmemorativo GORGAS, Ciudad de Panamá, Panamá
2 shared publications- Charles van Riper
School of Natural Resources and the Environment University of Arizona Tucson Arizona
2 shared publications Erika Marcé
Museum of Southwestern Biology and Department of Biology, University of New Mexico, Albuquerque, New Mexico, United States of America
2 shared publications- Gerardo Ceballos
Departamento de Ecología de la Biodiversidad, Instituto de Ecología Universidad Nacional Autónoma de México Ciudad de México México
2 shared publications
Latest Publications
- Open Access
- 29 March 2024
- Published by Springer Nature in Conservation Genetics
- Vol. 25 (3) , 835-848
Genetic connectivity in the Arizona toad (Anaxyrus microscaphus): implications for conservation of a stream dwelling amphibian in the arid Southwestern United States
The Arizona Toad (Anaxyrus microscaphus) is restricted to riverine corridors and adjacent uplands in the arid southwestern United States. As with numerous amphibians worldwide, populations are declining and face various known or suspected threats, from disease to habitat modification resulting from climate change. The Arizona Toad has been petitioned to be listed under the U.S. Endangered Species Act and was considered “warranted but precluded” citing the need for additional information – particularly regarding natural history (e.g., connectivity and dispersal ability). The objectives of this study were to characterize population structure and genetic diversity across the species’ range. We used reduced-representation genomic sequencing to genotype 3,601 single nucleotide polymorphisms in 99 Arizona Toads from ten drainages across its range. Multiple analytical methods revealed two distinct genetic groups bisected by the Colorado River; one in the northwestern portion of the range in southwestern Utah and eastern Nevada and the other in the southeastern portion of the range in central and eastern Arizona and New Mexico. We also found subtle substructure within both groups, particularly in central Arizona where toads at lower elevations were less connected than those at higher elevations. The northern and southern parts of the Arizona Toad range are not well connected genetically and could be managed as separate units. Further, these data could be used to identify source populations for assisted migration or translocations to support small or potentially declining populations.
- 29 March 2024
- Published by Springer Nature in Conservation Genetics
- Vol. 25 (3) , 835-848
Open AccessGenetic connectivity in the Arizona toad (Anaxyrus microscaphus): implications for conservation of a stream dwelling amphibian in the arid Southwestern United States
The Arizona Toad (Anaxyrus microscaphus) is restricted to riverine corridors and adjacent uplands in the arid southwestern United States. As with numerous amphibians worldwide, populations are declining and face various known or suspected threats, from disease to habitat modification resulting from climate change. The Arizona Toad has been petitioned to be listed under the U.S. Endangered Species Act and was considered “warranted but precluded” citing the need for additional information – particularly regarding natural history (e.g., connectivity and dispersal ability). The objectives of this study were to characterize population structure and genetic diversity across the species’ range. We used reduced-representation genomic sequencing to genotype 3,601 single nucleotide polymorphisms in 99 Arizona Toads from ten drainages across its range. Multiple analytical methods revealed two distinct genetic groups bisected by the Colorado River; one in the northwestern portion of the range in southwestern Utah and eastern Nevada and the other in the southeastern portion of the range in central and eastern Arizona and New Mexico. We also found subtle substructure within both groups, particularly in central Arizona where toads at lower elevations were less connected than those at higher elevations. The northern and southern parts of the Arizona Toad range are not well connected genetically and could be managed as separate units. Further, these data could be used to identify source populations for assisted migration or translocations to support small or potentially declining populations.
- 1 September 2018
- Published by Elsevier in Ecological Modelling
- Vol. 383, 52-68
Random subset feature selection for ecological niche models of wildfire activity in Western North America
- 1 September 2018
- Published by Elsevier in Ecological Modelling
- Vol. 383, 52-68
Random subset feature selection for ecological niche models of wildfire activity in Western North America
- Open Access
- 1 January 2016
- Published by US Geological Survey
Identifying bird and reptile vulnerabilities to climate change in the southwestern United States
Current and future breeding ranges of 15 bird and 16 reptile species were modeled in the Southwestern United States. Rather than taking a broad-scale, vulnerability-assessment approach, we created a species distribution model (SDM) for each focal species incorporating climatic, landscape, and plant variables. Baseline climate (1940–2009) was characterized with Parameter-elevation Regressions on Independent Slopes Model (PRISM) data and future climate with global-circulation-model data under an A1B emission scenario. Climatic variables included monthly and seasonal temperature and precipitation; landscape variables included terrain ruggedness, soil type, and insolation; and plant variables included trees and shrubs commonly associated with a focal species. Not all species-distribution models contained a plant, but if they did, we included a built-in annual migration rate for more accurate plant-range projections in 2039 or 2099. We conducted a group meta-analysis to (1) determine how influential each variable class was when averaged across all species distribution models (birds or reptiles), and (2) identify the correlation among contemporary (2009) habitat fragmentation and biological attributes and future range projections (2039 or 2099). Projected changes in bird and reptile ranges varied widely among species, with one-third of the ranges predicted to expand and two-thirds predicted to contract. A group meta-analysis indicated that climatic variables were the most influential variable class when averaged across all models for both groups, followed by landscape and plant variables (birds), or plant and landscape variables (reptiles), respectively. The second part of the meta-analysis indicated that numerous contemporary habitat-fragmentation (for example, patch isolation) and biological-attribute (for example, clutch size, longevity) variables were significantly correlated with the magnitude of projected range changes for birds and reptiles. Patch isolation was a significant trans-specific driver of projected bird and reptile ranges, suggesting that strategic actions should focus on restoration and enhancement of habitat at local and regional scales to promote landscape connectivity and conservation of core areas.
- 1 January 2016
- Published by US Geological Survey
Open AccessIdentifying bird and reptile vulnerabilities to climate change in the southwestern United States
Current and future breeding ranges of 15 bird and 16 reptile species were modeled in the Southwestern United States. Rather than taking a broad-scale, vulnerability-assessment approach, we created a species distribution model (SDM) for each focal species incorporating climatic, landscape, and plant variables. Baseline climate (1940–2009) was characterized with Parameter-elevation Regressions on Independent Slopes Model (PRISM) data and future climate with global-circulation-model data under an A1B emission scenario. Climatic variables included monthly and seasonal temperature and precipitation; landscape variables included terrain ruggedness, soil type, and insolation; and plant variables included trees and shrubs commonly associated with a focal species. Not all species-distribution models contained a plant, but if they did, we included a built-in annual migration rate for more accurate plant-range projections in 2039 or 2099. We conducted a group meta-analysis to (1) determine how influential each variable class was when averaged across all species distribution models (birds or reptiles), and (2) identify the correlation among contemporary (2009) habitat fragmentation and biological attributes and future range projections (2039 or 2099). Projected changes in bird and reptile ranges varied widely among species, with one-third of the ranges predicted to expand and two-thirds predicted to contract. A group meta-analysis indicated that climatic variables were the most influential variable class when averaged across all models for both groups, followed by landscape and plant variables (birds), or plant and landscape variables (reptiles), respectively. The second part of the meta-analysis indicated that numerous contemporary habitat-fragmentation (for example, patch isolation) and biological-attribute (for example, clutch size, longevity) variables were significantly correlated with the magnitude of projected range changes for birds and reptiles. Patch isolation was a significant trans-specific driver of projected bird and reptile ranges, suggesting that strategic actions should focus on restoration and enhancement of habitat at local and regional scales to promote landscape connectivity and conservation of core areas.
- 30 November 2015
- Published by Wiley in Functional Ecology
- Vol. 30 (6) , 964-973
Too dry for lizards: short‐term rainfall influence on lizard microhabitat use in an experimental rainfall manipulation within a piñon‐juniper
Summary: Ectotherms such as lizards are expected to alter their behaviour and microhabitat use and experience population declines in response to rising temperatures. But the role of changing rainfall patterns on lizard behaviour and microhabitat use is not understood. We used a 5‐year rainfall manipulation experiment in a piñon pine‐juniper woodland in central New Mexico to study how a lizard species' microhabitat use varies in four different rainfall treatments. We examined ground temperatures in the sun and shade, and daily rainfall, within each treatment, during lizard activity periods, to address how lizards used sun or shade microhabitats on a daily basis. Our small‐scale rainfall and temperature measurements indicate that rainfall, not temperatures, predict lizard microhabitat use. Lizards showed a strong preference for shaded microhabitats during dry periods and used sunny microhabitats following rainfall events, regardless of treatment type. Lizards remained active during dry periods, foraging in the shade of trees. Our study shows that rainfall can influence lizard microhabitat use more than temperature in a piñon pine‐juniper woodland and the trees provide important refugia. The loss of piñon pine and juniper trees from prolonged drought threatens to limit the amount of shade available to lizards in the future.
- 30 November 2015
- Published by Wiley in Functional Ecology
- Vol. 30 (6) , 964-973
Too dry for lizards: short‐term rainfall influence on lizard microhabitat use in an experimental rainfall manipulation within a piñon‐juniper
Summary: Ectotherms such as lizards are expected to alter their behaviour and microhabitat use and experience population declines in response to rising temperatures. But the role of changing rainfall patterns on lizard behaviour and microhabitat use is not understood. We used a 5‐year rainfall manipulation experiment in a piñon pine‐juniper woodland in central New Mexico to study how a lizard species' microhabitat use varies in four different rainfall treatments. We examined ground temperatures in the sun and shade, and daily rainfall, within each treatment, during lizard activity periods, to address how lizards used sun or shade microhabitats on a daily basis. Our small‐scale rainfall and temperature measurements indicate that rainfall, not temperatures, predict lizard microhabitat use. Lizards showed a strong preference for shaded microhabitats during dry periods and used sunny microhabitats following rainfall events, regardless of treatment type. Lizards remained active during dry periods, foraging in the shade of trees. Our study shows that rainfall can influence lizard microhabitat use more than temperature in a piñon pine‐juniper woodland and the trees provide important refugia. The loss of piñon pine and juniper trees from prolonged drought threatens to limit the amount of shade available to lizards in the future.
- 1 January 2014
- Published by US Geological Survey
Projecting climate effects on birds and reptiles of the Southwestern United States
- 1 January 2014
- Published by US Geological Survey
Projecting climate effects on birds and reptiles of the Southwestern United States
- Open Access
- 8 March 2011
- Published by Oxford University Press (OUP) in Evolution
- Vol. 65 (4) , 1195-1202
ANCIENT COLONIZATION PREDICTS RECENT NATURALIZATION IN ANOLIS LIZARDS
The distributions and characteristics of naturalized species may be explained by novel anthropogenous aspects of world biogeography such as the creation of favorable transport environments for propagules on ships. Conversely, the unprecedented connectivity of humans may simply accelerate omnipresent ecological and evolutionary forces, for example, ships may allow species that are generally good dispersers to disperse more quickly. As a null hypothesis, there may be no human component to species naturalization. The first hypothesis predicts that naturalized species will possess unusual characteristics specific to interactions with humans. The latter two hypotheses predict similarity between ancient colonizers and recently naturalized species. In this article, we present a test of the latter hypotheses and show how they may be reconciled with the former. We show that species of Anolis lizard that are ancient solitary colonizers share characteristics of size, shape, scalation, and phylogeny with naturalized species of Anolis. Characteristics of ancient solitary colonizers predict naturalization approximately as well as characteristics of naturalized species themselves. These results suggest the existence of a general colonizing type of Anolis, and that contemporary patterns of naturalization are at least partially explained by abilities that are unrelated to interactions with humans.
- 8 March 2011
- Published by Oxford University Press (OUP) in Evolution
- Vol. 65 (4) , 1195-1202
Open AccessANCIENT COLONIZATION PREDICTS RECENT NATURALIZATION IN ANOLIS LIZARDS
The distributions and characteristics of naturalized species may be explained by novel anthropogenous aspects of world biogeography such as the creation of favorable transport environments for propagules on ships. Conversely, the unprecedented connectivity of humans may simply accelerate omnipresent ecological and evolutionary forces, for example, ships may allow species that are generally good dispersers to disperse more quickly. As a null hypothesis, there may be no human component to species naturalization. The first hypothesis predicts that naturalized species will possess unusual characteristics specific to interactions with humans. The latter two hypotheses predict similarity between ancient colonizers and recently naturalized species. In this article, we present a test of the latter hypotheses and show how they may be reconciled with the former. We show that species of Anolis lizard that are ancient solitary colonizers share characteristics of size, shape, scalation, and phylogeny with naturalized species of Anolis. Characteristics of ancient solitary colonizers predict naturalization approximately as well as characteristics of naturalized species themselves. These results suggest the existence of a general colonizing type of Anolis, and that contemporary patterns of naturalization are at least partially explained by abilities that are unrelated to interactions with humans.
- 18 September 2010
- Published by Springer Nature in Biological Invasions
- Vol. 13 (4) , 845-856
Traits associated with naturalization in Anolis lizards: comparison of morphological, distributional, anthropogenic, and phylogenetic models
- 18 September 2010
- Published by Springer Nature in Biological Invasions
- Vol. 13 (4) , 845-856
Traits associated with naturalization in Anolis lizards: comparison of morphological, distributional, anthropogenic, and phylogenetic models
- 1 September 2010
- Published by American Society of Ichthyologists and Herpetologists (ASIH) in Copeia
- Vol. 2010 (3) , 405-409
A New Species of the Craugastor rugulosus Series (Anura: Craugastoridae) from West-Central Panama
- 1 September 2010
- Published by American Society of Ichthyologists and Herpetologists (ASIH) in Copeia
- Vol. 2010 (3) , 405-409
A New Species of the Craugastor rugulosus Series (Anura: Craugastoridae) from West-Central Panama
- 1 June 2010
- Published by Society for the Study of Amphibians and Reptiles in Journal of Herpetology
- Vol. 44 (2) , 193-200
New Species of Pristimantis (Anura: Terrarana: Strabomantinae) from Lower Central America
- 1 June 2010
- Published by Society for the Study of Amphibians and Reptiles in Journal of Herpetology
- Vol. 44 (2) , 193-200
New Species of Pristimantis (Anura: Terrarana: Strabomantinae) from Lower Central America
- Open Access
- 6 May 2009
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 4 (5) , e5461
Experimental Evidence for Reduced Rodent Diversity Causing Increased Hantavirus Prevalence
Emerging and re-emerging infectious diseases have become a major global environmental problem with important public health, economic, and political consequences. The etiologic agents of most emerging infectious diseases are zoonotic, and anthropogenic environmental changes that affect wildlife communities are increasingly implicated in disease emergence and spread. Although increased disease incidence has been correlated with biodiversity loss for several zoonoses, experimental tests in these systems are lacking. We manipulated small-mammal biodiversity by removing non-reservoir species in replicated field plots in Panama, where zoonotic hantaviruses are endemic. Both infection prevalence of hantaviruses in wild reservoir (rodent) populations and reservoir population density increased where small-mammal species diversity was reduced. Regardless of other variables that affect the prevalence of directly transmitted infections in natural communities, high biodiversity is important in reducing transmission of zoonotic pathogens among wildlife hosts. Our results have wide applications in both conservation biology and infectious disease management.
- 6 May 2009
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 4 (5) , e5461
Open AccessExperimental Evidence for Reduced Rodent Diversity Causing Increased Hantavirus Prevalence
Emerging and re-emerging infectious diseases have become a major global environmental problem with important public health, economic, and political consequences. The etiologic agents of most emerging infectious diseases are zoonotic, and anthropogenic environmental changes that affect wildlife communities are increasingly implicated in disease emergence and spread. Although increased disease incidence has been correlated with biodiversity loss for several zoonoses, experimental tests in these systems are lacking. We manipulated small-mammal biodiversity by removing non-reservoir species in replicated field plots in Panama, where zoonotic hantaviruses are endemic. Both infection prevalence of hantaviruses in wild reservoir (rodent) populations and reservoir population density increased where small-mammal species diversity was reduced. Regardless of other variables that affect the prevalence of directly transmitted infections in natural communities, high biodiversity is important in reducing transmission of zoonotic pathogens among wildlife hosts. Our results have wide applications in both conservation biology and infectious disease management.