Oak-Jin Lee

There is a growing need to establish a breed reassessment system responding to tomato spotted wilt virus (TSWV) mutations. Conventional visual survey methods allow for assessing TSWV severity and disease incidence, while enzyme-linked Immunosorbent Assay (ELISA) data analysis can replace and validate visual surveys. This study proposes a non-destructive evaluation technique for TSWV using an open software platform based on image processing and machine learning. Many studies have evaluated resistance to the TSWV. However, as strains that destroy TSWV resistance emerge, an evaluation technique that can identify new genetic resources with resistance to the variants is needed. Evaluation techniques based on images and machine learning have the strength to respond quickly and accurately to the emergence of new variants. However, studies on resistance to viruses rely on empirical judgment based on visual surveys. The accuracy of the training model using Support Vector Machine (SVM), Logistic Regression (LR), and neural networks (NNs) was excellent, in the following order: NNs (0.86), LR (0.81), SVM (0.65). Meanwhile, the accuracy of the validation model was good, in the following order NN (0.84), LR (0.79), SVM (0.71). NNs’ prediction performance was verified through ELISA data analysis, showing a causal relationship between the two data sets with an R² of 0.86 with statistical significance. Imaging and NN-based TSWV resistance assessment technologies show significant potential as key tools in genetic resource reassessment systems that ensure a rapid and accurate response to the emergence of new TSWV strains.

Watermelon (Citrullus spp.) is an economically important crop globally, but it is susceptible to various diseases, including powdery mildew. Previous studies have identified genetic factors associated with powdery mildew resistance. However, further research using diverse genetic approaches is necessary to elucidate the underlying genetic mechanisms of this resistance. In this study, the germplasm collection comprising highly homozygous inbred lines was employed, which enabled the accumulation of consistent data and improved the reliability of the genome-wide association study (GWAS) findings. Our investigation identified two significant single-nucleotide polymorphisms (SNPs), pm2.1 and pm3.1, which were strongly associated with disease resistance. Moreover, several candidate genes were revealed within the linkage disequilibrium (LD) blocks surrounding the significant SNPs. In conclusion, the identification of significant SNPs and their additive effects, combined with the discovery of relevant candidate genes, expanded our understanding of the genetic basis of disease resistance and can pave the way for the development of more resilient watermelon cultivars through marker-assisted selection.

The fruit flesh of watermelons differs depending on the distinct carotenoid composition. Orange-colored flesh relates to the accumulation of β-carotene, which is beneficial to human health. Canary-yellow-fleshed OTO-DAH and orange-β-fleshed (orange-fleshed with high β-carotene) NB-DAH near-isogenic lines (NILs) were used to determine the genetic mechanism attributed to orange watermelon flesh. For genetic mapping, an F₂ population was developed by crossing the two NILs. The segregation ratio of flesh color in the F₂ population indicated that the orange-β flesh of the NB-DAH NIL was controlled by a single incompletely dominant gene. Through a comparative analysis of the whole-genome sequences of the parent lines and NILs, a major introgression region unique to the NB-DAH NIL was detected on Chr. 1; this was considered a candidate region for harboring genes that distinguish orange from canary-yellow and red flesh. Among the 13 genes involved in the carotenoid metabolic pathway in watermelons, only ClPSY1 (ClCG01G008470), which encodes phytoene synthase 1, was located within the introgression region. The genotyping of F₂ plants using a cleaved amplified polymorphic sequence marker developed from a non-synonymous SNP in ClPSY1 revealed its relationship with orange-β flesh. The insights gained in this study can be applied to marker-assisted breeding for this desirable trait.

As global warming increases day/night temperatures as well as frequencies of heat waves, studying physiological responses in long-term heat stress is required for sustainable yield production in the future. In this study, effects of long-term heat stress on photosynthetic, morphological, and yield parameters of three cherry tomato accessions, HR17, HR22, and HR24, were evaluated. The experiment was conducted under two temperature greenhouse conditions, where temperature set-point for ventilation was 30 °C and 35 °C during the day for 57 days, respectively. Plants were harvested on the 35th days and 57th days after heat treatments, and their physiological and morphological characteristics and yield traits were measured. Under control conditions, HR17 and HR22 had 0.5–0.6 harvest index, while HR24 had 0.3 harvest index. On 35th days after heat treatment, although yield loss percentage of HR17 was high (43%), it produced the highest fruit yield among all three accessions. However, after longer heat treatment, HR24 produced the highest fruit yields among all accessions with the smallest yield loss (34%). Furthermore, yield loss was highly associated with reductions in nitrogen use efficiency and water content in plant body under heat stress. The results of this study will provide breeders with a new insight into selecting heat-tolerant genotypes in cherry tomatoes.

Watermelon grafting is practiced in order to improve tolerance to poor environments such as low temperature. This study was conducted to investigate the effect of low-temperature tolerant bottle gourd (Lagenaria siceraria) rootstocks on the growth and fruit quality of watermelon in semi-forcing and retarding culture where plants were exposed to low or high temperature. Five bottle gourd accessions (FR79, IT207112, BG702, BG703, and FRD22) with low temperature tolerance were evaluated as rootstock for the watermelon scion ‘Sambokkul’. Non-grafted watermelon and watermelon grafted onto commercial rootstock ‘Shintozwa’ (Cucurbita maxima D. × C. moschata D.) or ‘Bullojangsaeng’ (L. siceraria) were used as controls. Watermelons were cultivated in spring (April to June, semi-forcing culture) and autumn (August to October, retarding culture). The responses to low-temperature, growth, yield, and fruit quality differed depending on the rootstocks and growing season. In semi-forcing culture, the monthly averages of daily and minimum temperature in April were, respectively, 13.4 and 1.5 °C. Although the low temperature of the early growth stage suppressed the initial growth of watermelons, grafting mitigated the low-temperature stress. The fruit quality of non-grafted watermelons was greater, but the fruit mass was the lowest (4.8 kg). Grafting onto ‘Shintozwa’ increased the fruit weight (7.0 kg) but reduced the fruit quality. Grafting onto bottle gourd rootstocks had high affinity, good root growth, tolerance to low temperature, and little effect on fruit quality. In retarding culture, the temperature conditions in early and late growth were very high and low, respectively. The growth and fruit quality of grafted watermelons were not superior to those of non-grafted watermelons. Accordingly, these results suggest that watermelon grafting onto the bottle gourd rootstocks may increase the low-temperature tolerance, especially in the early growth stage, and the marketable yield without a reduction in fruit quality. The most promising accession for this purpose was found to be ‘FR79’.

Sang Gyu Kim, Kwanuk Lee, Taebok Kim, Hyo-Bong Jeong, Eun-Young Yang, Seung Yu Kim, Jihye Moon, Yoonah Jang, and Oak-Jin Lee. Korean J. Breed. Sci. 2022;54:184-94. https://doi.org/10.9787/KJBS.2022.54.3.184

Climate change is an important emerging issue worldwide; the surface temperature of the earth is anticipated to increase by 0.3 °C in every decade. This elevated temperature causes an adverse impact of heat stress (HS) on vegetable crops; this has been considered as a crucial limiting factor for global food security as well as crop production. In tomato plants, HS also causes changes in physiological, morphological, biochemical, and molecular responses during all vegetative and reproductive growth stages, resulting in poor fruit quality and low yield. Thus, to select genotypes and develop tomato cultivars with heat tolerance, feasible and reliable screening strategies are required that can be adopted in breeding programs in both open-field and greenhouse conditions. In this review, we discuss previous and recent studies describing attempts to screen heat-tolerant tomato genotypes under HS that have adopted different HS regimes and threshold temperatures, and the association of heat tolerance with physiological and biochemical traits during vegetative and reproductive growth stages. In addition, we examined the wide variety of parameters to evaluate the tomato’s tolerance to HS, including vegetative growth, such as leaf growth parameters, plant height and stem, as well as reproductive growth in terms of flower number, fruit set and yield, and pollen and ovule development, thereby proposing strategies for the development of heat-tolerant tomato cultivars in response to high temperature.

Trans-lycopene is a functional phytochemical abundant in red-fleshed watermelons, and its contents vary among cultivars. In this study, the genetic basis of high trans-lycopene contents in scarlet red flesh was evaluated. Three near-isogenic lines (NILs) with high trans-lycopene contents were derived from the scarlet red-fleshed donor parent DRD and three coral red-fleshed (low trans-lycopene contents) recurrent parents. The lycopene contents of DRD (589.4 ± 71.8 µg/g) were two times higher than that of the recurrent parents, and values for NILs were intermediate between those of the parents. Coral red-fleshed lines and F1 cultivars showed low trans-lycopene contents (135.7 ± 18.0 µg/g to 213.7 ± 39.5 µg/g). Whole-genome resequencing of two NILs and their parents and an analysis of genome-wide single-nucleotide polymorphisms revealed three common introgressed regions (CIRs) on chromosomes 6, 9, and 10. Twenty-eight gene-based cleaved amplified polymorphic sequence (CAPS) markers were developed from the CIRs. The CAPS markers derived from CIR6 on chromosome 6, spanning approximately 1 Mb, were associated (R² = 0.45–0.72) with the trans-lycopene contents, particularly CIR6-M1 and CIR6-M4. Our results imply that CIR6 is a major genomic region associated with variation in the trans-lycopene contents in red-fleshed watermelon, and CIR6-M1 and CIR6-M4 may be useful for marker-assisted selection.

Irregular rooting of rosemary stem cuttings, causing differences in either stem maturation or responses to growth conditions, restricts uniform production. Here, rooting efficiency of apical, middle, and basal cuttings from rosemary stems was evaluated by controlling light conditions to prevent irregular rooting. The types of light applied to the cuttings were natural sunlight (NSL), fluorescent, red, and blue (BL) light. Among these light sources, BL significantly induced root growth of not only basal cuttings, but also apical and middle cuttings, whereas NSL induced poor root formation in apical and middle cuttings. In particular, the roots of apical cuttings exposed to BL grew twice as fast as those exposed to other types of light. The overexpression of BL-induced IAA synthetic genes confirmed the rooting patterns. IAA synthetic genes were significantly upregulated by BL in the apical and middle cuttings. Irradiating with 50 μmol photons m⁻² s⁻¹ BL resulted in similar root production levels among the cutting positions with high biomass, guaranteeing the successful production of uniform cuttings. Thus, the application of proper high-intensity BL promoted healthy, similar-quality rosemary cuttings among stem cutting positions.