Deng Chen
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Deng Chen has a total of 19 co-authors. Here are the top co-authors by number of shared publications:
- Ling Liu
Department of Neurology West China Hospital, Sichuan University Chengdu China
3 shared publications - Haijiao Wang
Department of Neurology, West China Hospital, Sichuan University, Chengdu, China
2 shared publications - Jie Zhong
School of Economics and Management, Tsinghua University, Beijing, China
2 shared publications - Lina Zhu
Rehabilitation Medicine Center and Institute of Rehabilitation Medicine, West China Hospital, Sichuan University, Chengdu, China
2 shared publications - Shanshan Chu
Department of Neurology, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100005, China
2 shared publications - Ting Lei
Department of Neurosurgery Shang Jin Nan Fu Hospital of West China Hospital Sichuan University Chengdu China
2 shared publications
Latest Publications
Excess mortality and causes of death of people with epilepsy in rural China: A nationwide cohort study
Objective: Epilepsy is associated with increased risk of excess mortality compared to the general population. Identifying causes of death is critical for guiding prevention strategies. Earlier studies in resource‐limited settings suggested that accidental deaths were the main causes, but whether the mortality pattern has changed over time remains unclear. This study aimed to update the knowledge on mortality and causes of death of people with epilepsy in rural China. Methods: In this nationwide cohort study, we analyzed data from the Epilepsy Prevention and Management Project in rural China between January 1, 2018, and December 31, 2020. Mortality outcomes included all‐cause mortality, causes of death, and standardized mortality ratios (SMRs). Kaplan–Meier, multivariable Cox, and restricted cubic spline analyses were used to assess mortality risk and associated factors. Results: Among 17 515 participants followed for 25 922 person‐years, 381 deaths were recorded, yielding an all‐cause mortality rate of 14.7 per 1000 person‐years. The leading causes of death were circulatory system diseases (47.8%), including cerebrovascular disease (28.9%), and heart disease (18.9%). The all‐cause SMR was 3.51 (95% confidence interval = 3.33–3.70). The highest cause‐specific excess mortality was observed for brain malignancies (SMR = 20.30). Male sex, older age at epilepsy onset, longer disease duration, and higher baseline seizure frequency were independently associated with mortality. Significance: People with epilepsy in rural China continue to experience substantial and potentially preventable excess mortality. As mortality patterns shift, prevention strategies should extend beyond seizure control and injury prevention to include vascular risk management and timely neuroimaging for suspected structural lesions. Prospective studies are needed to determine whether these strategies improve survival.
Excess mortality and causes of death of people with epilepsy in rural China: A nationwide cohort study
Objective: Epilepsy is associated with increased risk of excess mortality compared to the general population. Identifying causes of death is critical for guiding prevention strategies. Earlier studies in resource‐limited settings suggested that accidental deaths were the main causes, but whether the mortality pattern has changed over time remains unclear. This study aimed to update the knowledge on mortality and causes of death of people with epilepsy in rural China. Methods: In this nationwide cohort study, we analyzed data from the Epilepsy Prevention and Management Project in rural China between January 1, 2018, and December 31, 2020. Mortality outcomes included all‐cause mortality, causes of death, and standardized mortality ratios (SMRs). Kaplan–Meier, multivariable Cox, and restricted cubic spline analyses were used to assess mortality risk and associated factors. Results: Among 17 515 participants followed for 25 922 person‐years, 381 deaths were recorded, yielding an all‐cause mortality rate of 14.7 per 1000 person‐years. The leading causes of death were circulatory system diseases (47.8%), including cerebrovascular disease (28.9%), and heart disease (18.9%). The all‐cause SMR was 3.51 (95% confidence interval = 3.33–3.70). The highest cause‐specific excess mortality was observed for brain malignancies (SMR = 20.30). Male sex, older age at epilepsy onset, longer disease duration, and higher baseline seizure frequency were independently associated with mortality. Significance: People with epilepsy in rural China continue to experience substantial and potentially preventable excess mortality. As mortality patterns shift, prevention strategies should extend beyond seizure control and injury prevention to include vascular risk management and timely neuroimaging for suspected structural lesions. Prospective studies are needed to determine whether these strategies improve survival.
- Open Access
- 19 August 2021
- Published by JMIR Publications Inc. in Journal of Medical Internet Research
- Vol. 23 (8) , e25090
An Artificial Neural Network Prediction Model for Posttraumatic Epilepsy: Retrospective Cohort Study
Background: Posttraumatic epilepsy (PTE) is a common sequela after traumatic brain injury (TBI), and identifying high-risk patients with PTE is necessary for their better treatment. Although artificial neural network (ANN) prediction models have been reported and are superior to traditional models, the ANN prediction model for PTE is lacking. Objective: We aim to train and validate an ANN model to anticipate the risks of PTE. Methods: The training cohort was TBI patients registered at West China Hospital. We used a 5-fold cross-validation approach to train and test the ANN model to avoid overfitting; 21 independent variables were used as input neurons in the ANN models, using a back-propagation algorithm to minimize the loss function. Finally, we obtained sensitivity, specificity, and accuracy of each ANN model from the 5 rounds of cross-validation and compared the accuracy with a nomogram prediction model built in our previous work based on the same population. In addition, we evaluated the performance of the model using patients registered at Chengdu Shang Jin Nan Fu Hospital (testing cohort 1) and Sichuan Provincial People’s Hospital (testing cohort 2) between January 1, 2013, and March 1, 2015. Results: For the training cohort, we enrolled 1301 TBI patients from January 1, 2011, to December 31, 2017. The prevalence of PTE was 12.8% (166/1301, 95% CI 10.9%-14.6%). Of the TBI patients registered in testing cohort 1, PTE prevalence was 10.5% (44/421, 95% CI 7.5%-13.4%). Of the TBI patients registered in testing cohort 2, PTE prevalence was 6.1% (25/413, 95% CI 3.7%-8.4%). The results of the ANN model show that, the area under the receiver operating characteristic curve in the training cohort was 0.907 (95% CI 0.889-0.924), testing cohort 1 was 0.867 (95% CI 0.842-0.893), and testing cohort 2 was 0.859 (95% CI 0.826-0.890). Second, the average accuracy of the training cohort was 0.557 (95% CI 0.510-0.620), with 0.470 (95% CI 0.414-0.526) in testing cohort 1 and 0.344 (95% CI 0.287-0.401) in testing cohort 2. In addition, sensitivity, specificity, positive predictive values and negative predictors in the training cohort (testing cohort 1 and testing cohort 2) were 0.80 (0.83 and 0.80), 0.86 (0.80 and 0.84), 91% (85% and 78%), and 86% (80% and 83%), respectively. When calibrating this ANN model, Brier scored 0.121 in testing cohort 1 and 0.127 in testing cohort 2. Compared with the nomogram model, the ANN prediction model had a higher accuracy (P=.01). Conclusions: This study shows that the ANN model can predict the risk of PTE and is superior to the risk estimated based on traditional statistical methods. However, the calibration of the model is a bit poor, and we need to calibrate it on a large sample size set and further improve the model.
- 19 August 2021
- Published by JMIR Publications Inc. in Journal of Medical Internet Research
- Vol. 23 (8) , e25090
Open AccessAn Artificial Neural Network Prediction Model for Posttraumatic Epilepsy: Retrospective Cohort Study
Background: Posttraumatic epilepsy (PTE) is a common sequela after traumatic brain injury (TBI), and identifying high-risk patients with PTE is necessary for their better treatment. Although artificial neural network (ANN) prediction models have been reported and are superior to traditional models, the ANN prediction model for PTE is lacking. Objective: We aim to train and validate an ANN model to anticipate the risks of PTE. Methods: The training cohort was TBI patients registered at West China Hospital. We used a 5-fold cross-validation approach to train and test the ANN model to avoid overfitting; 21 independent variables were used as input neurons in the ANN models, using a back-propagation algorithm to minimize the loss function. Finally, we obtained sensitivity, specificity, and accuracy of each ANN model from the 5 rounds of cross-validation and compared the accuracy with a nomogram prediction model built in our previous work based on the same population. In addition, we evaluated the performance of the model using patients registered at Chengdu Shang Jin Nan Fu Hospital (testing cohort 1) and Sichuan Provincial People’s Hospital (testing cohort 2) between January 1, 2013, and March 1, 2015. Results: For the training cohort, we enrolled 1301 TBI patients from January 1, 2011, to December 31, 2017. The prevalence of PTE was 12.8% (166/1301, 95% CI 10.9%-14.6%). Of the TBI patients registered in testing cohort 1, PTE prevalence was 10.5% (44/421, 95% CI 7.5%-13.4%). Of the TBI patients registered in testing cohort 2, PTE prevalence was 6.1% (25/413, 95% CI 3.7%-8.4%). The results of the ANN model show that, the area under the receiver operating characteristic curve in the training cohort was 0.907 (95% CI 0.889-0.924), testing cohort 1 was 0.867 (95% CI 0.842-0.893), and testing cohort 2 was 0.859 (95% CI 0.826-0.890). Second, the average accuracy of the training cohort was 0.557 (95% CI 0.510-0.620), with 0.470 (95% CI 0.414-0.526) in testing cohort 1 and 0.344 (95% CI 0.287-0.401) in testing cohort 2. In addition, sensitivity, specificity, positive predictive values and negative predictors in the training cohort (testing cohort 1 and testing cohort 2) were 0.80 (0.83 and 0.80), 0.86 (0.80 and 0.84), 91% (85% and 78%), and 86% (80% and 83%), respectively. When calibrating this ANN model, Brier scored 0.121 in testing cohort 1 and 0.127 in testing cohort 2. Compared with the nomogram model, the ANN prediction model had a higher accuracy (P=.01). Conclusions: This study shows that the ANN model can predict the risk of PTE and is superior to the risk estimated based on traditional statistical methods. However, the calibration of the model is a bit poor, and we need to calibrate it on a large sample size set and further improve the model.
- Open Access
- 16 October 2020
- Published by JMIR Publications Inc. in JMIR Preprints
An Artificial Neural Network Prediction Model for Posttraumatic Epilepsy: Retrospective Cohort Study (Preprint)
BACKGROUND Posttraumatic epilepsy (PTE) is a common sequela after traumatic brain injury (TBI), and identifying high-risk patients with PTE is necessary for their better treatment. Although artificial neural network (ANN) prediction models have been reported and are superior to traditional models, the ANN prediction model for PTE is lacking. OBJECTIVE We aim to train and validate an ANN model to anticipate the risks of PTE. METHODS The training cohort was TBI patients registered at West China Hospital. We used a 5-fold cross-validation approach to train and test the ANN model to avoid overfitting; 21 independent variables were used as input neurons in the ANN models, using a back-propagation algorithm to minimize the loss function. Finally, we obtained sensitivity, specificity, and accuracy of each ANN model from the 5 rounds of cross-validation and compared the accuracy with a nomogram prediction model built in our previous work based on the same population. In addition, we evaluated the performance of the model using patients registered at Chengdu Shang Jin Nan Fu Hospital (testing cohort 1) and Sichuan Provincial People’s Hospital (testing cohort 2) between January 1, 2013, and March 1, 2015. RESULTS For the training cohort, we enrolled 1301 TBI patients from January 1, 2011, to December 31, 2017. The prevalence of PTE was 12.8% (166/1301, 95% CI 10.9%-14.6%). Of the TBI patients registered in testing cohort 1, PTE prevalence was 10.5% (44/421, 95% CI 7.5%-13.4%). Of the TBI patients registered in testing cohort 2, PTE prevalence was 6.1% (25/413, 95% CI 3.7%-8.4%). The results of the ANN model show that, the area under the receiver operating characteristic curve in the training cohort was 0.907 (95% CI 0.889-0.924), testing cohort 1 was 0.867 (95% CI 0.842-0.893), and testing cohort 2 was 0.859 (95% CI 0.826-0.890). Second, the average accuracy of the training cohort was 0.557 (95% CI 0.510-0.620), with 0.470 (95% CI 0.414-0.526) in testing cohort 1 and 0.344 (95% CI 0.287-0.401) in testing cohort 2. In addition, sensitivity, specificity, positive predictive values and negative predictors in the training cohort (testing cohort 1 and testing cohort 2) were 0.80 (0.83 and 0.80), 0.86 (0.80 and 0.84), 91% (85% and 78%), and 86% (80% and 83%), respectively. When calibrating this ANN model, Brier scored 0.121 in testing cohort 1 and 0.127 in testing cohort 2. Compared with the nomogram model, the ANN prediction model had a higher accuracy (P=.01). CONCLUSIONS This study shows that the ANN model can predict the risk of PTE and is superior to the risk estimated based on traditional statistical methods. However, the calibration of the model is a bit poor, and we need to calibrate it on a large sample size set and further improve the model.
- 16 October 2020
- Published by JMIR Publications Inc. in JMIR Preprints
Open AccessAn Artificial Neural Network Prediction Model for Posttraumatic Epilepsy: Retrospective Cohort Study (Preprint)
BACKGROUND Posttraumatic epilepsy (PTE) is a common sequela after traumatic brain injury (TBI), and identifying high-risk patients with PTE is necessary for their better treatment. Although artificial neural network (ANN) prediction models have been reported and are superior to traditional models, the ANN prediction model for PTE is lacking. OBJECTIVE We aim to train and validate an ANN model to anticipate the risks of PTE. METHODS The training cohort was TBI patients registered at West China Hospital. We used a 5-fold cross-validation approach to train and test the ANN model to avoid overfitting; 21 independent variables were used as input neurons in the ANN models, using a back-propagation algorithm to minimize the loss function. Finally, we obtained sensitivity, specificity, and accuracy of each ANN model from the 5 rounds of cross-validation and compared the accuracy with a nomogram prediction model built in our previous work based on the same population. In addition, we evaluated the performance of the model using patients registered at Chengdu Shang Jin Nan Fu Hospital (testing cohort 1) and Sichuan Provincial People’s Hospital (testing cohort 2) between January 1, 2013, and March 1, 2015. RESULTS For the training cohort, we enrolled 1301 TBI patients from January 1, 2011, to December 31, 2017. The prevalence of PTE was 12.8% (166/1301, 95% CI 10.9%-14.6%). Of the TBI patients registered in testing cohort 1, PTE prevalence was 10.5% (44/421, 95% CI 7.5%-13.4%). Of the TBI patients registered in testing cohort 2, PTE prevalence was 6.1% (25/413, 95% CI 3.7%-8.4%). The results of the ANN model show that, the area under the receiver operating characteristic curve in the training cohort was 0.907 (95% CI 0.889-0.924), testing cohort 1 was 0.867 (95% CI 0.842-0.893), and testing cohort 2 was 0.859 (95% CI 0.826-0.890). Second, the average accuracy of the training cohort was 0.557 (95% CI 0.510-0.620), with 0.470 (95% CI 0.414-0.526) in testing cohort 1 and 0.344 (95% CI 0.287-0.401) in testing cohort 2. In addition, sensitivity, specificity, positive predictive values and negative predictors in the training cohort (testing cohort 1 and testing cohort 2) were 0.80 (0.83 and 0.80), 0.86 (0.80 and 0.84), 91% (85% and 78%), and 86% (80% and 83%), respectively. When calibrating this ANN model, Brier scored 0.121 in testing cohort 1 and 0.127 in testing cohort 2. Compared with the nomogram model, the ANN prediction model had a higher accuracy (P=.01). CONCLUSIONS This study shows that the ANN model can predict the risk of PTE and is superior to the risk estimated based on traditional statistical methods. However, the calibration of the model is a bit poor, and we need to calibrate it on a large sample size set and further improve the model.