Baihan Lin
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Baihan Lin has a total of 206 co-authors. Here are the top co-authors by number of shared publications:
- Djallel Bouneffouf
IBM Research
16 shared publications - Guillermo Cecchi
IBM T.J. Watson Research Center, Yorktown Heights, USA
15 shared publications Djallel Bouneffouf
IBM Research, T.J. Watson Research Center, Yorktown Heights, USA
9 shared publications- Eileen Koski
IBM Research , Yorktown Heights, NY 10598
4 shared publications Guillermo A. Cecchi
4 shared publicationsGuillermo Cecchi
Affiliation Department of Healthcare and Life Sciences, IBM Thomas J. Watson Research Center, Yorktown Heights, NY, United States of America
4 shared publications
Latest Publications
- Open Access
- 3 August 2026
- Published by Springer Nature in Translational Psychiatry
- Vol. 16 (1)
Temporal elements of speech in mania
- 3 August 2026
- Published by Springer Nature in Translational Psychiatry
- Vol. 16 (1)
Open AccessTemporal elements of speech in mania
- Open Access
- 26 September 2025
- Published by Oxford University Press (OUP) in Journal of the American Medical Informatics Association
- Vol. 32 (11) , 1746-1755
Towards responsible artificial intelligence in healthcare—getting real about real-world data and evidence
Background: The use of real-world data (RWD) in artificial intelligence (AI) applications for healthcare offers unique opportunities but also poses complex challenges related to interpretability, transparency, safety, efficacy, bias, equity, privacy, ethics, accountability, and stakeholder engagement. Methods: A multi-stakeholder expert panel comprising healthcare professionals, AI developers, policymakers, and other stakeholders was assembled. Their task was to identify critical issues and formulate consensus recommendations, focusing on the responsible use of RWD in healthcare AI. The panel’s work involved an in-person conference and workshop and extensive deliberations over several months. Results: The panel’s findings revealed several critical challenges, including the necessity for data literacy and documentation, the identification and mitigation of bias, privacy and ethics considerations, and the absence of an accountability structure for stakeholder management. To address these, the panel proposed a series of recommendations, such as the adoption of metadata standards for RWD sources, the development of transparency frameworks and instructional labels likened to “nutrition labels” for AI applications, the provision of cross-disciplinary training materials, the implementation of bias detection and mitigation strategies, and the establishment of ongoing monitoring and update processes. Conclusion: Guidelines and resources focused on the responsible use of RWD in healthcare AI are essential for developing safe, effective, equitable, and trustworthy applications. The proposed recommendations provide a foundation for a comprehensive framework addressing the entire lifecycle of healthcare AI, emphasizing the importance of documentation, training, transparency, accountability, and multi-stakeholder engagement.
- 26 September 2025
- Published by Oxford University Press (OUP) in Journal of the American Medical Informatics Association
- Vol. 32 (11) , 1746-1755
Open AccessTowards responsible artificial intelligence in healthcare—getting real about real-world data and evidence
Background: The use of real-world data (RWD) in artificial intelligence (AI) applications for healthcare offers unique opportunities but also poses complex challenges related to interpretability, transparency, safety, efficacy, bias, equity, privacy, ethics, accountability, and stakeholder engagement. Methods: A multi-stakeholder expert panel comprising healthcare professionals, AI developers, policymakers, and other stakeholders was assembled. Their task was to identify critical issues and formulate consensus recommendations, focusing on the responsible use of RWD in healthcare AI. The panel’s work involved an in-person conference and workshop and extensive deliberations over several months. Results: The panel’s findings revealed several critical challenges, including the necessity for data literacy and documentation, the identification and mitigation of bias, privacy and ethics considerations, and the absence of an accountability structure for stakeholder management. To address these, the panel proposed a series of recommendations, such as the adoption of metadata standards for RWD sources, the development of transparency frameworks and instructional labels likened to “nutrition labels” for AI applications, the provision of cross-disciplinary training materials, the implementation of bias detection and mitigation strategies, and the establishment of ongoing monitoring and update processes. Conclusion: Guidelines and resources focused on the responsible use of RWD in healthcare AI are essential for developing safe, effective, equitable, and trustworthy applications. The proposed recommendations provide a foundation for a comprehensive framework addressing the entire lifecycle of healthcare AI, emphasizing the importance of documentation, training, transparency, accountability, and multi-stakeholder engagement.
- Open Access
- 23 September 2025
- Published by eLife Sciences Publications, Ltd in eLife preprints
A Python Toolbox for Representational Similarity Analysis
Representational similarity analysis (RSA) is a method to characterize neural representations and evaluate computational models based on neural representational geometries. Here we present a wave of recent methodological advances, including improved measures of representational distances, evaluators for representational models, and statistical inference methods, which are available to the community in a new open-source toolbox in Python. The rsatoolbox enables neuroscientists to explore neural representational geometries and to evaluate neural network models, connecting theory to experiment in the new era of big models and big data.
- 23 September 2025
- Published by eLife Sciences Publications, Ltd in eLife preprints
Open AccessA Python Toolbox for Representational Similarity Analysis
Representational similarity analysis (RSA) is a method to characterize neural representations and evaluate computational models based on neural representational geometries. Here we present a wave of recent methodological advances, including improved measures of representational distances, evaluators for representational models, and statistical inference methods, which are available to the community in a new open-source toolbox in Python. The rsatoolbox enables neuroscientists to explore neural representational geometries and to evaluate neural network models, connecting theory to experiment in the new era of big models and big data.
- Open Access
Perceptual Reality Transformer: Neural Architectures for Simulating Neurological Perception Conditions
Neurological conditions affecting visual perception create profound experiential divides between affected individuals and their caregivers, families, and medical professionals. We present the Perceptual Reality Transformer, a comprehensive framework employing six distinct neural architectures to simulate eight neurological perception conditions with scientifically-grounded visual transformations. Our system learns mappings from natural images to condition-specific perceptual states, enabling others to experience approximations of simultanagnosia, prosopagnosia, ADHD attention deficits, visual agnosia, depression-related changes, anxiety tunnel vision, and Alzheimer's memory effects. Through systematic evaluation across ImageNet and CIFAR-10 datasets, we demonstrate that Vision Transformer architectures achieve optimal performance, outperforming traditional CNN and generative approaches. Our work establishes the first systematic benchmark for neurological perception simulation, contributes novel condition-specific perturbation functions grounded in clinical literature, and provides quantitative metrics for evaluating simulation fidelity. The framework has immediate applications in medical education, empathy training, and assistive technology development, while advancing our fundamental understanding of how neural networks can model atypical human perception.
Open AccessPerceptual Reality Transformer: Neural Architectures for Simulating Neurological Perception Conditions
Neurological conditions affecting visual perception create profound experiential divides between affected individuals and their caregivers, families, and medical professionals. We present the Perceptual Reality Transformer, a comprehensive framework employing six distinct neural architectures to simulate eight neurological perception conditions with scientifically-grounded visual transformations. Our system learns mappings from natural images to condition-specific perceptual states, enabling others to experience approximations of simultanagnosia, prosopagnosia, ADHD attention deficits, visual agnosia, depression-related changes, anxiety tunnel vision, and Alzheimer's memory effects. Through systematic evaluation across ImageNet and CIFAR-10 datasets, we demonstrate that Vision Transformer architectures achieve optimal performance, outperforming traditional CNN and generative approaches. Our work establishes the first systematic benchmark for neurological perception simulation, contributes novel condition-specific perturbation functions grounded in clinical literature, and provides quantitative metrics for evaluating simulation fidelity. The framework has immediate applications in medical education, empathy training, and assistive technology development, while advancing our fundamental understanding of how neural networks can model atypical human perception.
- Open Access
Word Clouds as Common Voices: LLM-Assisted Visualization of Participant-Weighted Themes in Qualitative Interviews
Word clouds are a common way to summarize qualitative interviews, yet traditional frequency-based methods often fail in conversational contexts: they surface filler words, ignore paraphrase, and fragment semantically related ideas. This limits their usefulness in early-stage analysis, when researchers need fast, interpretable overviews of what participant actually said. We introduce ThemeClouds, an open-source visualization tool that uses large language models (LLMs) to generate thematic, participant-weighted word clouds from dialogue transcripts. The system prompts an LLM to identify concept-level themes across a corpus and then counts how many unique participants mention each topic, yielding a visualization grounded in breadth of mention rather than raw term frequency. Researchers can customize prompts and visualization parameters, providing transparency and control. Using interviews from a user study comparing five recording-device configurations (31 participants; 155 transcripts, Whisper ASR), our approach surfaces more actionable device concerns than frequency clouds and topic-modeling baselines (e.g., LDA, BERTopic). We discuss design trade-offs for integrating LLM assistance into qualitative workflows, implications for interpretability and researcher agency, and opportunities for interactive analyses such as per-condition contrasts (``diff clouds'').
Open AccessWord Clouds as Common Voices: LLM-Assisted Visualization of Participant-Weighted Themes in Qualitative Interviews
Word clouds are a common way to summarize qualitative interviews, yet traditional frequency-based methods often fail in conversational contexts: they surface filler words, ignore paraphrase, and fragment semantically related ideas. This limits their usefulness in early-stage analysis, when researchers need fast, interpretable overviews of what participant actually said. We introduce ThemeClouds, an open-source visualization tool that uses large language models (LLMs) to generate thematic, participant-weighted word clouds from dialogue transcripts. The system prompts an LLM to identify concept-level themes across a corpus and then counts how many unique participants mention each topic, yielding a visualization grounded in breadth of mention rather than raw term frequency. Researchers can customize prompts and visualization parameters, providing transparency and control. Using interviews from a user study comparing five recording-device configurations (31 participants; 155 transcripts, Whisper ASR), our approach surfaces more actionable device concerns than frequency clouds and topic-modeling baselines (e.g., LDA, BERTopic). We discuss design trade-offs for integrating LLM assistance into qualitative workflows, implications for interpretability and researcher agency, and opportunities for interactive analyses such as per-condition contrasts (``diff clouds'').
- Top Cited PapersOpen Access
- 19 June 2025
- Published by Elsevier in International Journal of Medical Informatics
- Vol. 203, 106015
Toward responsible AI governance: Balancing multi-stakeholder perspectives on AI in healthcare
- 19 June 2025
- Published by Elsevier in International Journal of Medical Informatics
- Vol. 203, 106015
Top Cited PapersOpen AccessToward responsible AI governance: Balancing multi-stakeholder perspectives on AI in healthcare
- Open Access
A Python Toolbox for Representational Similarity Analysis
Representational similarity analysis (RSA) is a method to characterize neural representations and evaluate computational models based on neural representational geometries. Here we present a wave of recent methodological advances, including improved measures of representational distances, evaluators for representational models, and statistical inference methods, which are available to the community in a new open-source toolbox in Python. The rsatoolbox enables neuroscientists to explore neural representational geometries and to evaluate neural network models, connecting theory to experiment in the new era of big models and big data.
Open AccessA Python Toolbox for Representational Similarity Analysis
Representational similarity analysis (RSA) is a method to characterize neural representations and evaluate computational models based on neural representational geometries. Here we present a wave of recent methodological advances, including improved measures of representational distances, evaluators for representational models, and statistical inference methods, which are available to the community in a new open-source toolbox in Python. The rsatoolbox enables neuroscientists to explore neural representational geometries and to evaluate neural network models, connecting theory to experiment in the new era of big models and big data.
- Top Cited PapersOpen Access
- 15 May 2025
- Published by Springer Nature in Translational Psychiatry
- Vol. 15 (1) , 1-15
COMPASS: Computational mapping of patient-therapist alliance strategies with language modeling
The therapeutic working alliance is a critical predictor of psychotherapy success. Traditionally, working alliance assessment relies on questionnaires completed by both therapists and patients. In this paper, we present COMPASS, a novel framework to directly infer the therapeutic working alliance from the natural language used in psychotherapy sessions. Our approach leverages advanced large language models (LLMs) to analyze session transcripts and map them to distributed representations. These representations capture the semantic similarities between the dialogues and psychometric instruments, such as the Working Alliance Inventory. Analyzing a dataset of over 950 sessions spanning diverse psychiatric conditions -- including anxiety (N = 498), depression (N = 377), schizophrenia (N = 71), and suicidal tendencies (N = 12) -- collected between 1970 and 2012, we demonstrate the effectiveness of our method in providing fine-grained mapping of patient-therapist alignment trajectories, offering interpretable insights for clinical practice, and identifying emerging patterns related to the condition being treated. By employing various deep learning-based topic modeling techniques in combination with prompting generative language models, we analyze the topical characteristics of different psychiatric conditions and how these topics evolve during each turn of the conversation. This integrated framework enhances the understanding of therapeutic interactions, enables timely feedback for therapists on the quality of therapeutic relationships, and provides clear, actionable insights to improve the effectiveness of psychotherapy.
- 15 May 2025
- Published by Springer Nature in Translational Psychiatry
- Vol. 15 (1) , 1-15
Top Cited PapersOpen AccessCOMPASS: Computational mapping of patient-therapist alliance strategies with language modeling
The therapeutic working alliance is a critical predictor of psychotherapy success. Traditionally, working alliance assessment relies on questionnaires completed by both therapists and patients. In this paper, we present COMPASS, a novel framework to directly infer the therapeutic working alliance from the natural language used in psychotherapy sessions. Our approach leverages advanced large language models (LLMs) to analyze session transcripts and map them to distributed representations. These representations capture the semantic similarities between the dialogues and psychometric instruments, such as the Working Alliance Inventory. Analyzing a dataset of over 950 sessions spanning diverse psychiatric conditions -- including anxiety (N = 498), depression (N = 377), schizophrenia (N = 71), and suicidal tendencies (N = 12) -- collected between 1970 and 2012, we demonstrate the effectiveness of our method in providing fine-grained mapping of patient-therapist alignment trajectories, offering interpretable insights for clinical practice, and identifying emerging patterns related to the condition being treated. By employing various deep learning-based topic modeling techniques in combination with prompting generative language models, we analyze the topical characteristics of different psychiatric conditions and how these topics evolve during each turn of the conversation. This integrated framework enhances the understanding of therapeutic interactions, enables timely feedback for therapists on the quality of therapeutic relationships, and provides clear, actionable insights to improve the effectiveness of psychotherapy.
- Open Access
- 1 January 2025
- Published by Association for Computational Linguistics (ACL)
- p. 169-177
Word Clouds as Common Voices: LLM-Assisted Visualization of Participant-Weighted Themes in Qualitative Interviews
Joseph T Colonel, Baihan Lin. Proceedings of the Fourth Workshop on Bridging Human-Computer Interaction and Natural Language Processing (HCI+NLP). 2025.
- 1 January 2025
- Published by Association for Computational Linguistics (ACL)
- p. 169-177
Open AccessWord Clouds as Common Voices: LLM-Assisted Visualization of Participant-Weighted Themes in Qualitative Interviews
Joseph T Colonel, Baihan Lin. Proceedings of the Fourth Workshop on Bridging Human-Computer Interaction and Natural Language Processing (HCI+NLP). 2025.