BLBaihan Lin

Baihan Lin

*This is an algorithmically generated author record based on publicly available information.

Current Organizations / Institutes

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Previous Organizations / Institutes

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Baihan Lin has a total of 206 co-authors. Here are the top co-authors by number of shared publications:


Latest Publications

  • Open Access

    Computational Phenotyping and Predictive Modeling of Outcomes Using Multimodal Objective Measures in Psychiatry

    by Shalaila S. Haas, Rachel Jespersen, Joseph T. Colonel, Adam Davidson, Bailey M. Todtfeld, Theodore J. Servedio, Maya A. Valenzano, Nazly A. Suarez, Sophie W. Riviere, Debora G. Meche, et al.

  • Open Access

    Temporal elements of speech in mania

    by Jeremiah B. Joyce, Ivan N. Ayala, Sanjeev Mishra, George Chatzisofroniou, Erik Clemens, Hang Yu, Tyler Kendall, Zachi Attia, Baihan Lin, Mark A. Frye

  • Open Access

    Towards responsible artificial intelligence in healthcare—getting real about real-world data and evidence

    by Eileen Koski, Amar Das, Pei-Yun Sabrina Hsueh, Anthony Solomonides, Amanda L Joseph, Gyana Srivastava, Carl Erwin Johnson, Joseph Kannry, Bilikis Oladimeji, Amy Price, et al.

    Background: The use of real-world data (RWD) in artificial intelligence (AI) applications for healthcare offers unique opportunities but also poses complex challenges related to interpretability, transparency, safety, efficacy, bias, equity, privacy, ethics, accountability, and stakeholder engagement. Methods: A multi-stakeholder expert panel comprising healthcare professionals, AI developers, policymakers, and other stakeholders was assembled. Their task was to identify critical issues and formulate consensus recommendations, focusing on the responsible use of RWD in healthcare AI. The panel’s work involved an in-person conference and workshop and extensive deliberations over several months. Results: The panel’s findings revealed several critical challenges, including the necessity for data literacy and documentation, the identification and mitigation of bias, privacy and ethics considerations, and the absence of an accountability structure for stakeholder management. To address these, the panel proposed a series of recommendations, such as the adoption of metadata standards for RWD sources, the development of transparency frameworks and instructional labels likened to “nutrition labels” for AI applications, the provision of cross-disciplinary training materials, the implementation of bias detection and mitigation strategies, and the establishment of ongoing monitoring and update processes. Conclusion: Guidelines and resources focused on the responsible use of RWD in healthcare AI are essential for developing safe, effective, equitable, and trustworthy applications. The proposed recommendations provide a foundation for a comprehensive framework addressing the entire lifecycle of healthcare AI, emphasizing the importance of documentation, training, transparency, accountability, and multi-stakeholder engagement.


  • Open Access

    A Python Toolbox for Representational Similarity Analysis

    by Jasper Jf van Den Bosch, Tal Golan, Benjamin Peters, JohnMark Taylor, Mahdiyar Shahbazi, Baihan Lin, Ian Charest, Jörn Diedrichsen, Nikolaus Kriegeskorte, Marieke Mur, et al.

    Representational similarity analysis (RSA) is a method to characterize neural representations and evaluate computational models based on neural representational geometries. Here we present a wave of recent methodological advances, including improved measures of representational distances, evaluators for representational models, and statistical inference methods, which are available to the community in a new open-source toolbox in Python. The rsatoolbox enables neuroscientists to explore neural representational geometries and to evaluate neural network models, connecting theory to experiment in the new era of big models and big data.


  • Open Access

    Perceptual Reality Transformer: Neural Architectures for Simulating Neurological Perception Conditions

    by Baihan Lin

    Neurological conditions affecting visual perception create profound experiential divides between affected individuals and their caregivers, families, and medical professionals. We present the Perceptual Reality Transformer, a comprehensive framework employing six distinct neural architectures to simulate eight neurological perception conditions with scientifically-grounded visual transformations. Our system learns mappings from natural images to condition-specific perceptual states, enabling others to experience approximations of simultanagnosia, prosopagnosia, ADHD attention deficits, visual agnosia, depression-related changes, anxiety tunnel vision, and Alzheimer's memory effects. Through systematic evaluation across ImageNet and CIFAR-10 datasets, we demonstrate that Vision Transformer architectures achieve optimal performance, outperforming traditional CNN and generative approaches. Our work establishes the first systematic benchmark for neurological perception simulation, contributes novel condition-specific perturbation functions grounded in clinical literature, and provides quantitative metrics for evaluating simulation fidelity. The framework has immediate applications in medical education, empathy training, and assistive technology development, while advancing our fundamental understanding of how neural networks can model atypical human perception.

  • Open Access

    Word Clouds as Common Voices: LLM-Assisted Visualization of Participant-Weighted Themes in Qualitative Interviews

    by Joseph T. Colonel, Baihan Lin

    Word clouds are a common way to summarize qualitative interviews, yet traditional frequency-based methods often fail in conversational contexts: they surface filler words, ignore paraphrase, and fragment semantically related ideas. This limits their usefulness in early-stage analysis, when researchers need fast, interpretable overviews of what participant actually said. We introduce ThemeClouds, an open-source visualization tool that uses large language models (LLMs) to generate thematic, participant-weighted word clouds from dialogue transcripts. The system prompts an LLM to identify concept-level themes across a corpus and then counts how many unique participants mention each topic, yielding a visualization grounded in breadth of mention rather than raw term frequency. Researchers can customize prompts and visualization parameters, providing transparency and control. Using interviews from a user study comparing five recording-device configurations (31 participants; 155 transcripts, Whisper ASR), our approach surfaces more actionable device concerns than frequency clouds and topic-modeling baselines (e.g., LDA, BERTopic). We discuss design trade-offs for integrating LLM assistance into qualitative workflows, implications for interpretability and researcher agency, and opportunities for interactive analyses such as per-condition contrasts (``diff clouds'').

  • Top Cited Papers
    Open Access

    Toward responsible AI governance: Balancing multi-stakeholder perspectives on AI in healthcare

    by Leon Rozenblit, Amy Price, Anthony Solomonides, Amanda L. Joseph, Eileen Koski, Gyana Srivastava, Steven Labkoff, David Bray, Monica Lopez-Gonzalez, Reva Singh, et al.


  • Open Access

    A Python Toolbox for Representational Similarity Analysis

    by Jasper J.F. van Den Bosch, Tal Golan, Benjamin Peters, JohnMark Taylor, Mahdiyar Shahbazi, Baihan Lin, Ian Charest, Jörn Diedrichsen, Nikolaus Kriegeskorte, Marieke Mur, et al.

    Representational similarity analysis (RSA) is a method to characterize neural representations and evaluate computational models based on neural representational geometries. Here we present a wave of recent methodological advances, including improved measures of representational distances, evaluators for representational models, and statistical inference methods, which are available to the community in a new open-source toolbox in Python. The rsatoolbox enables neuroscientists to explore neural representational geometries and to evaluate neural network models, connecting theory to experiment in the new era of big models and big data.


  • Top Cited Papers
    Open Access

    COMPASS: Computational mapping of patient-therapist alliance strategies with language modeling

    by Baihan Lin, Djallel Bouneffouf, Yulia Landa, Rachel Jespersen, Cheryl Corcoran, Guillermo Cecchi

    The therapeutic working alliance is a critical predictor of psychotherapy success. Traditionally, working alliance assessment relies on questionnaires completed by both therapists and patients. In this paper, we present COMPASS, a novel framework to directly infer the therapeutic working alliance from the natural language used in psychotherapy sessions. Our approach leverages advanced large language models (LLMs) to analyze session transcripts and map them to distributed representations. These representations capture the semantic similarities between the dialogues and psychometric instruments, such as the Working Alliance Inventory. Analyzing a dataset of over 950 sessions spanning diverse psychiatric conditions -- including anxiety (N = 498), depression (N = 377), schizophrenia (N = 71), and suicidal tendencies (N = 12) -- collected between 1970 and 2012, we demonstrate the effectiveness of our method in providing fine-grained mapping of patient-therapist alignment trajectories, offering interpretable insights for clinical practice, and identifying emerging patterns related to the condition being treated. By employing various deep learning-based topic modeling techniques in combination with prompting generative language models, we analyze the topical characteristics of different psychiatric conditions and how these topics evolve during each turn of the conversation. This integrated framework enhances the understanding of therapeutic interactions, enables timely feedback for therapists on the quality of therapeutic relationships, and provides clear, actionable insights to improve the effectiveness of psychotherapy.


  • Open Access

    Word Clouds as Common Voices: LLM-Assisted Visualization of Participant-Weighted Themes in Qualitative Interviews

    by Joseph T Colonel, Baihan Lin

    Joseph T Colonel, Baihan Lin. Proceedings of the Fourth Workshop on Bridging Human-Computer Interaction and Natural Language Processing (HCI+NLP). 2025.