Mark Adams
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Mark Adams has a total of 33 co-authors. Here are the top co-authors by number of shared publications:
- Scott Stewart
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
11 shared publications - Nathan Martindale
Oak Ridge National Laboratory
9 shared publications - Philip R. Bingham
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
7 shared publications - Anibely Torres Polanco
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
5 shared publications - Chengping Chai
Oak Ridge National Laboratory, Oak Ridge, Tennessee, U.S.A.
5 shared publications - Christopher B. Stanley
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
5 shared publications
Latest Publications
- Open Access
- 1 December 2025
- Published by Office of Scientific and Technical Information (OSTI)
Model Card for WaveDP
- 1 December 2025
- Published by Office of Scientific and Technical Information (OSTI)
Open AccessModel Card for WaveDP
- Open Access
- 10 November 2025
- Published by Seismological Society of America (SSA) in Bulletin of the Seismological Society of America
- Vol. 116 (1) , 192-204
Denoising Seismograms in the Time Domain Using a Deep Learning Model
Deep learning has emerged as a transformative tool for enhancing the extraction of reliable information from seismograms, addressing the increasing demand for precise and efficient seismic data analysis. We introduce an innovative encoder–decoder deep learning model, named WaveDenoiser, designed for noise reduction in the time domain, thereby eliminating the need for spectrogram computations that have been used for existing deep learning tools and significantly improving processing speed. Utilizing the benchmark dataset that is Stanford Earthquake Dataset, we developed three models of varying sizes: base, medium, and large. Notably, the large (referred to as WaveDenoiser) model demonstrated superior performance, achieving a median signal-to-noise ratio improvement of 8.8 dB on in-distribution unseen data (in the same geographic region) and 7.7 dB on out-distribution unseen data (in a new geographic region), outpacing both the base and medium models. Further evaluation of the WaveDenoiser model revealed a reduction in median arrival-time errors by 0.02 s for P waves and 0.01 s for S waves when processing waveforms prior to phase picking using PhaseNet on in-distribution unseen data. When tested on out-distribution unseen data, the model also effectively reduced the P-wave median arrival-time error by 0.02 and 0.01 s in median arrival-time error for S waves. Importantly, the application of WaveDenoiser resulted in a significant reduction of phase picking outliers by 1.1% to 3.6% for both P and S waves. In addition, we achieved over five times acceleration in processing speed compared with the seisBench implementation of DeepDenoiser. Our findings underscore the potential of WaveDenoiser as a powerful tool for improving seismic data analysis and processing efficiency.
- 10 November 2025
- Published by Seismological Society of America (SSA) in Bulletin of the Seismological Society of America
- Vol. 116 (1) , 192-204
Open AccessDenoising Seismograms in the Time Domain Using a Deep Learning Model
Deep learning has emerged as a transformative tool for enhancing the extraction of reliable information from seismograms, addressing the increasing demand for precise and efficient seismic data analysis. We introduce an innovative encoder–decoder deep learning model, named WaveDenoiser, designed for noise reduction in the time domain, thereby eliminating the need for spectrogram computations that have been used for existing deep learning tools and significantly improving processing speed. Utilizing the benchmark dataset that is Stanford Earthquake Dataset, we developed three models of varying sizes: base, medium, and large. Notably, the large (referred to as WaveDenoiser) model demonstrated superior performance, achieving a median signal-to-noise ratio improvement of 8.8 dB on in-distribution unseen data (in the same geographic region) and 7.7 dB on out-distribution unseen data (in a new geographic region), outpacing both the base and medium models. Further evaluation of the WaveDenoiser model revealed a reduction in median arrival-time errors by 0.02 s for P waves and 0.01 s for S waves when processing waveforms prior to phase picking using PhaseNet on in-distribution unseen data. When tested on out-distribution unseen data, the model also effectively reduced the P-wave median arrival-time error by 0.02 and 0.01 s in median arrival-time error for S waves. Importantly, the application of WaveDenoiser resulted in a significant reduction of phase picking outliers by 1.1% to 3.6% for both P and S waves. In addition, we achieved over five times acceleration in processing speed compared with the seisBench implementation of DeepDenoiser. Our findings underscore the potential of WaveDenoiser as a powerful tool for improving seismic data analysis and processing efficiency.
- Open Access
- 1 August 2025
- Published by Office of Scientific and Technical Information (OSTI)
Model Card for WaveDenoiser
- 1 August 2025
- Published by Office of Scientific and Technical Information (OSTI)
Open AccessModel Card for WaveDenoiser
- 7 March 2025
- Published by Seismological Society of America (SSA) in Seismological Research Letters
- Vol. 96 (4) , 2394-2404
PickerXL, A Large Deep Learning Model to Measure Arrival Times from Noisy Seismic Signals
Precisely measuring seismic arrival times is a labor-intensive task but is critical for both earthquake monitoring and subsurface imaging. Recently published deep learning models have demonstrated superior performance compared to traditional automatic approaches for picking arrival times. Although existing deep learning models have shown promising results, further advancements are necessary as their performance is not yet satisfactory especially when applied to new regions and station networks. Increasing model size has led to improved performance in other machine learning applications. We aimed to investigate whether enlarging deep learning models can increase performance on accepted benchmarks. We trained three models of varying sizes, small (1X), medium (4X), and large (16X), using globally distributed local and regional earthquake signals and background noise waveforms from a benchmark dataset, Stanford Earthquake Dataset. Our results indicate that the largest model (PickerXL) outperforms both the smaller models and Seisbench implementation of the PhaseNet model, which has the same number of parameters as our small model. The PickerXL model’s enhanced capacity to extract complex patterns from seismograms contributes to its superior arrival picking abilities compared to the smaller model.
- 7 March 2025
- Published by Seismological Society of America (SSA) in Seismological Research Letters
- Vol. 96 (4) , 2394-2404
PickerXL, A Large Deep Learning Model to Measure Arrival Times from Noisy Seismic Signals
Precisely measuring seismic arrival times is a labor-intensive task but is critical for both earthquake monitoring and subsurface imaging. Recently published deep learning models have demonstrated superior performance compared to traditional automatic approaches for picking arrival times. Although existing deep learning models have shown promising results, further advancements are necessary as their performance is not yet satisfactory especially when applied to new regions and station networks. Increasing model size has led to improved performance in other machine learning applications. We aimed to investigate whether enlarging deep learning models can increase performance on accepted benchmarks. We trained three models of varying sizes, small (1X), medium (4X), and large (16X), using globally distributed local and regional earthquake signals and background noise waveforms from a benchmark dataset, Stanford Earthquake Dataset. Our results indicate that the largest model (PickerXL) outperforms both the smaller models and Seisbench implementation of the PhaseNet model, which has the same number of parameters as our small model. The PickerXL model’s enhanced capacity to extract complex patterns from seismograms contributes to its superior arrival picking abilities compared to the smaller model.
- Open Access
- 2 December 2024
- Published by The Open Journal in Journal of Open Source Software
- Vol. 9 (104) , 6866
Dimensionally Aligned Signal Projection Algorithms Library
Dimensionally aligned signal projection (DASP) algorithms are used to analyze fast Fourier transforms (FFTs) and generate visualizations that help focus on the harmonics for specific signals. At a high level, these algorithms extract the FFT segments around each harmonic frequency center, and then align them in equally sized arrays ordered by increasing distance from the base frequency. This allows for a focused view of the harmonic frequencies, which, among other use cases, can enable machine learning algorithms to more easily identify salient patterns. This work seeks to provide an effective open-source implementation of the DASP algorithms proposed by Vann et al. (2018) as well as functionality to help explore and test how these algorithms work with an interactive dashboard and signal-generation tool.
- 2 December 2024
- Published by The Open Journal in Journal of Open Source Software
- Vol. 9 (104) , 6866
Open AccessDimensionally Aligned Signal Projection Algorithms Library
Dimensionally aligned signal projection (DASP) algorithms are used to analyze fast Fourier transforms (FFTs) and generate visualizations that help focus on the harmonics for specific signals. At a high level, these algorithms extract the FFT segments around each harmonic frequency center, and then align them in equally sized arrays ordered by increasing distance from the base frequency. This allows for a focused view of the harmonic frequencies, which, among other use cases, can enable machine learning algorithms to more easily identify salient patterns. This work seeks to provide an effective open-source implementation of the DASP algorithms proposed by Vann et al. (2018) as well as functionality to help explore and test how these algorithms work with an interactive dashboard and signal-generation tool.
- 1 December 2024
- Published by Office of Scientific and Technical Information (OSTI)
Model Card for PickerXL
- 1 December 2024
- Published by Office of Scientific and Technical Information (OSTI)
Model Card for PickerXL
- Open Access
- 25 October 2023
- Published by The Open Journal in Journal of Open Source Software
- Vol. 8 (90) , 5793
Curifactory: A research experiment manager
- 25 October 2023
- Published by The Open Journal in Journal of Open Source Software
- Vol. 8 (90) , 5793
Open AccessCurifactory: A research experiment manager
- Open Access
- 1 August 2023
- Published by Office of Scientific and Technical Information (OSTI)
An Advanced Techno-Economic Modeling Tool for Geothermal Heat Pump Applications in Residential and Commercial Buildings (Final Report)
The U.S. Department of Energy's Office of Scientific and Technical Information
- 1 August 2023
- Published by Office of Scientific and Technical Information (OSTI)
Open AccessAn Advanced Techno-Economic Modeling Tool for Geothermal Heat Pump Applications in Residential and Commercial Buildings (Final Report)
The U.S. Department of Energy's Office of Scientific and Technical Information
- Open Access
- 1 January 2022
- Published by NumFOCUS - Insight Software Consortium (ITK)
Design of a Scientific Data Analysis Support Platform
Studying the design features necessary for a workflow and experiment management system, and presenting Curifactory: an open source package that meets these design features.
- 1 January 2022
- Published by NumFOCUS - Insight Software Consortium (ITK)
Open AccessDesign of a Scientific Data Analysis Support Platform
Studying the design features necessary for a workflow and experiment management system, and presenting Curifactory: an open source package that meets these design features.
- Open Access
- 1 January 2022
- Published by NumFOCUS - Insight Software Consortium (ITK) in Proceedings of the Python in Science Conference
- p. 179-186
Design of a Scientific Data Analysis Support Platform
- 1 January 2022
- Published by NumFOCUS - Insight Software Consortium (ITK) in Proceedings of the Python in Science Conference
- p. 179-186
Open AccessDesign of a Scientific Data Analysis Support Platform