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Arturas Kairys has a total of 8 co-authors. Here are the top co-authors by number of shared publications:


Latest Publications

  • Open Access

    Analysis of Training Data Augmentation for Diabetic Foot Ulcer Semantic Segmentation

    by Arturas Kairys, Vidas Raudonis

    Deep learning model training and achieved performance relies on available data. Diabetic foot ulcers and other image processing applications in the medical domain add another layer of complexity to training data collection. Data collection is troublesome and data annotation requires medical expertise. This problem is usually solved by employing training data augmentation. Although in previous research augmentation was facilitated in various ways, it is rarely evaluated or reported how much it contributes to achieved performance. The current research seeks to answer this question by applying individual photometric and geometric augmentation techniques and comparing the model performance achieved for semantic segmentation of diabetic foot ulcers. It was found that geometric augmentation techniques help achieve a better model performance when compared with photometric techniques. The model trained using an augmented dataset and applying a shear technique was found to improve segmentation results the most; the benchmark dice score was increased by 6%. An additional improvement over the benchmark was observed (a total of 6.9%) when the model was trained using data combining image sets generated by the three best-performing augmentation techniques. The highest test dice score achieved was 91%.


  • Open Access

    Towards Home-Based Diabetic Foot Ulcer Monitoring: A Systematic Review

    by Arturas Kairys, Renata Pauliukiene, Vidas Raudonis, Jonas Ceponis

    It is considered that 1 in 10 adults worldwide have diabetes. Diabetic foot ulcers are some of the most common complications of diabetes, and they are associated with a high risk of lower-limb amputation and, as a result, reduced life expectancy. Timely detection and periodic ulcer monitoring can considerably decrease amputation rates. Recent research has demonstrated that computer vision can be used to identify foot ulcers and perform non-contact telemetry by using ulcer and tissue area segmentation. However, the applications are limited to controlled lighting conditions, and expert knowledge is required for dataset annotation. This paper reviews the latest publications on the use of artificial intelligence for ulcer area detection and segmentation. The PRISMA methodology was used to search for and select articles, and the selected articles were reviewed to collect quantitative and qualitative data. Qualitative data were used to describe the methodologies used in individual studies, while quantitative data were used for generalization in terms of dataset preparation and feature extraction. Publicly available datasets were accounted for, and methods for preprocessing, augmentation, and feature extraction were evaluated. It was concluded that public datasets can be used to form a bigger, more diverse datasets, and the prospects of wider image preprocessing and the adoption of augmentation require further research.


  • Open Access

    Automatic Detection of Microaneurysms in Fundus Images Using an Ensemble-Based Segmentation Method

    by Vidas Raudonis, Arturas Kairys, Rasa Verkauskiene, Jelizaveta Sokolovska, Goran Petrovski, Vilma Jurate Balciuniene, Vallo Volke

    In this study, a novel method for automatic microaneurysm detection in color fundus images is presented. The proposed method is based on three main steps: (1) image breakdown to smaller image patches, (2) inference to segmentation models, and (3) reconstruction of the predicted segmentation map from output patches. The proposed segmentation method is based on an ensemble of three individual deep networks, such as U-Net, ResNet34-UNet and UNet++. The performance evaluation is based on the calculation of the Dice score and IoU values. The ensemble-based model achieved higher Dice score (0.95) and IoU (0.91) values compared to other network architectures. The proposed ensemble-based model demonstrates the high practical application potential for detection of early-stage diabetic retinopathy in color fundus images.