Akerke Toleugazykyzy
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Akerke Toleugazykyzy has a total of 60 co-authors. Here are the top co-authors by number of shared publications:
- Kairat Bekbayev
Research School of Food Engineering, Shakarim University, Semey, Kazakhstan
10 shared publications - Karen Trchounian
Department of Biochemistry, Microbiology and Biotechnology, Faculty of Biology, Yerevan State University
8 shared publications - Anna Poladyan
Department of Biochemistry, Microbiology and Biotechnology, Faculty of Biology, Yerevan State University, Yerevan, Armenia
4 shared publications - Gayane Mikoyan
Research Institute of Biology, Faculty of Biology, Yerevan State University, Yerevan, Armenia
3 shared publications - Liana Vanyan
Department of Biochemistry, Microbiology and Biotechnology, Faculty of Biology, Yerevan State University, Yerevan, Armenia
3 shared publications Bakytzhan Bolkenov
2 shared publications
Latest Publications
- Open Access
- 24 June 2026
- Published by Elsevier in Energy Reports
- Vol. 16
Integrated biohydrogen and bioelectricity production by wild-type and engineered Escherichia coli using mixed kitchen lignocellulosic and meat waste hydrolysates
- 24 June 2026
- Published by Elsevier in Energy Reports
- Vol. 16
Open AccessIntegrated biohydrogen and bioelectricity production by wild-type and engineered Escherichia coli using mixed kitchen lignocellulosic and meat waste hydrolysates
- Open Access
- 19 May 2026
- Published by Elsevier in International Journal of Hydrogen Energy
- Vol. 242
Efficient co-valorization of sugar beet pulp/molasses hydrolysates by Escherichia coli for enhanced biohydrogen production
- 19 May 2026
- Published by Elsevier in International Journal of Hydrogen Energy
- Vol. 242
Open AccessEfficient co-valorization of sugar beet pulp/molasses hydrolysates by Escherichia coli for enhanced biohydrogen production
- 25 January 2026
- Published by Shakarim University in Bulletin of Shakarim University. Technical Sciences
- Vol. 1 (4(20)) , 455-466
INHIBITORS OF LIGNOCELLULOSIC BIOMASS: MECHANISMS OF ACTION AND IMPACT ON THE EFFICIENCY OF BIOLOGICAL HYDROGEN PRODUCTION (REVIEW)
The work is devoted to the study of inhibitory factors limiting the yield of biohydrogen during the processing of lignocellulosic biomass (LCB). In this context, dark fermentation is considered one of the most promising biological methods for producing hydrogen, since it does not require an external energy source, is compatible with modern reactor technologies and allows the use of a wide range of substrates. The main barrier to its industrial application remains the accumulation of toxic compounds formed during the pretreatment of LCB and during fermentation. The work summarizes information on the composition and action of the main inhibitors. The results of the analysis showed that the yield of H₂ during TF reaches 2-4 mol/mol sugar (maximum ~3.8 mol/mol hexose), but drops significantly in the presence of: (i) furans (furfural 0.03-8.23 g/l; 5-HMF 0.09-1.59 g/l), (ii) phenolic compounds of lignin (vanillin, syringaldehyde), (iii) organic acids (formic, acetic, levulinic), (iv) inorganic ions and heavy metals (Zn, Cu, Cr, Ni, etc.), (v) ammonia and sulfates. Dosedependent effects and changes in microbial community composition are also discussed, such as the effect of pH, the reduction in Clostridium abundance due to furfural, or the increase in Clostridium and Ruminococcaceae abundance with the addition of 5-HMP. Thus, understanding the mechanisms of action of inhibitors and finding ways to reduce their impact are key areas for improving the efficiency of dark fermentation and its implementation as a sustainable technology for converting lignocellulosic biomass into biohydrogen.
- 25 January 2026
- Published by Shakarim University in Bulletin of Shakarim University. Technical Sciences
- Vol. 1 (4(20)) , 455-466
INHIBITORS OF LIGNOCELLULOSIC BIOMASS: MECHANISMS OF ACTION AND IMPACT ON THE EFFICIENCY OF BIOLOGICAL HYDROGEN PRODUCTION (REVIEW)
The work is devoted to the study of inhibitory factors limiting the yield of biohydrogen during the processing of lignocellulosic biomass (LCB). In this context, dark fermentation is considered one of the most promising biological methods for producing hydrogen, since it does not require an external energy source, is compatible with modern reactor technologies and allows the use of a wide range of substrates. The main barrier to its industrial application remains the accumulation of toxic compounds formed during the pretreatment of LCB and during fermentation. The work summarizes information on the composition and action of the main inhibitors. The results of the analysis showed that the yield of H₂ during TF reaches 2-4 mol/mol sugar (maximum ~3.8 mol/mol hexose), but drops significantly in the presence of: (i) furans (furfural 0.03-8.23 g/l; 5-HMF 0.09-1.59 g/l), (ii) phenolic compounds of lignin (vanillin, syringaldehyde), (iii) organic acids (formic, acetic, levulinic), (iv) inorganic ions and heavy metals (Zn, Cu, Cr, Ni, etc.), (v) ammonia and sulfates. Dosedependent effects and changes in microbial community composition are also discussed, such as the effect of pH, the reduction in Clostridium abundance due to furfural, or the increase in Clostridium and Ruminococcaceae abundance with the addition of 5-HMP. Thus, understanding the mechanisms of action of inhibitors and finding ways to reduce their impact are key areas for improving the efficiency of dark fermentation and its implementation as a sustainable technology for converting lignocellulosic biomass into biohydrogen.
- Open Access
- 1 January 2026
- Published by Wiley in International Journal of Energy Research
- Vol. 2026 (1)
Transforming Vegetable Waste Potential Into Biohydrogen and Biomass Using E. Coli
In this study acid‐hydrolyzed mixed vegetable waste was investigated as a sole carbon source for anaerobic fermentative growth and biohydrogen (H 2 ) production by Escherichia coli . E. coli BW25113 wild type and a septuple mutant lacking key hydrogenase and fermentative enzymes were cultivated during anaerobic conditions using vegetable waste hydrolysates (VWHs) prepared at substrate concentrations of 5%–20% (w/v) and varying dilution levels. Both strains were able to grow anaerobically on VWHs, confirming the effective release of fermentable substrates during acid pretreatment. Maximum biomass formation by the wild‐type strain reached 0.46 g cell dry weight (g CDW) L −1 in undiluted 20% VWH, while the septuple mutant exhibited improved growth only upon dilution, indicating higher sensitivity to hydrolysate derived inhibitory compounds. Fermentable carbon removal efficiency (CRE) and H 2 production were strongly dependent on substrate concentration and dilution level. H 2 production was completely suppressed in undiluted VWHs but was restored upon dilution, with the highest cumulative H 2 production (406 NmL) observed for the septuple mutant grown on 20% VWH at two‐fold dilution. The corresponding H 2 yield reached approximately 2.4 NL H 2 g −1 (consumed) carbohydrate g −1 biomass or 355 NmL per gram initial carbohydrate. These results demonstrate that VWH can support both biomass formation and competitive H 2 production by E. coli , highlighting their potential as a sustainable platform for waste valorization and bioenergy generation.
- 1 January 2026
- Published by Wiley in International Journal of Energy Research
- Vol. 2026 (1)
Open AccessTransforming Vegetable Waste Potential Into Biohydrogen and Biomass Using E. Coli
In this study acid‐hydrolyzed mixed vegetable waste was investigated as a sole carbon source for anaerobic fermentative growth and biohydrogen (H 2 ) production by Escherichia coli . E. coli BW25113 wild type and a septuple mutant lacking key hydrogenase and fermentative enzymes were cultivated during anaerobic conditions using vegetable waste hydrolysates (VWHs) prepared at substrate concentrations of 5%–20% (w/v) and varying dilution levels. Both strains were able to grow anaerobically on VWHs, confirming the effective release of fermentable substrates during acid pretreatment. Maximum biomass formation by the wild‐type strain reached 0.46 g cell dry weight (g CDW) L −1 in undiluted 20% VWH, while the septuple mutant exhibited improved growth only upon dilution, indicating higher sensitivity to hydrolysate derived inhibitory compounds. Fermentable carbon removal efficiency (CRE) and H 2 production were strongly dependent on substrate concentration and dilution level. H 2 production was completely suppressed in undiluted VWHs but was restored upon dilution, with the highest cumulative H 2 production (406 NmL) observed for the septuple mutant grown on 20% VWH at two‐fold dilution. The corresponding H 2 yield reached approximately 2.4 NL H 2 g −1 (consumed) carbohydrate g −1 biomass or 355 NmL per gram initial carbohydrate. These results demonstrate that VWH can support both biomass formation and competitive H 2 production by E. coli , highlighting their potential as a sustainable platform for waste valorization and bioenergy generation.
- Open Access
- 24 October 2025
- Published by MDPI AG in Sustainability
- Vol. 17 (21) , 9492
Comprehensive Review of Recent Trends in the Use of Deep Eutectic Solvents for the Valorization of Secondary Lignocellulosic Biomass
Conventional solvents remain the most used media for lignocellulosic biomass valorization. However, these solvents exhibit many limitations and have a negative environmental impact. In the last decade, Deep Eutectic Solvents (DESs) have emerged as a multifaceted tool in biomass valorization, with a promising perspective in the application of lignocellulosic biomass valorization. DESs have gained attention in the last decade as an alternative solvent in biomass valorization and biorefinery processes due to their high efficiency; eco-friendliness; low cost; and numerous other advantages, such as recyclability, non-volatility, and stability. This paper discusses the latest research on the potential applications of DESs in the valorization of secondary lignocellulosic biomass.
- 24 October 2025
- Published by MDPI AG in Sustainability
- Vol. 17 (21) , 9492
Open AccessComprehensive Review of Recent Trends in the Use of Deep Eutectic Solvents for the Valorization of Secondary Lignocellulosic Biomass
Conventional solvents remain the most used media for lignocellulosic biomass valorization. However, these solvents exhibit many limitations and have a negative environmental impact. In the last decade, Deep Eutectic Solvents (DESs) have emerged as a multifaceted tool in biomass valorization, with a promising perspective in the application of lignocellulosic biomass valorization. DESs have gained attention in the last decade as an alternative solvent in biomass valorization and biorefinery processes due to their high efficiency; eco-friendliness; low cost; and numerous other advantages, such as recyclability, non-volatility, and stability. This paper discusses the latest research on the potential applications of DESs in the valorization of secondary lignocellulosic biomass.
- Open Access
- 11 October 2025
- Published by Elsevier in Industrial Crops and Products
- Vol. 236
Conversion of spent coffee grounds into bioenergy and biomass using Clostridium species: A sustainable pathway for renewable energy
- 11 October 2025
- Published by Elsevier in Industrial Crops and Products
- Vol. 236
Open AccessConversion of spent coffee grounds into bioenergy and biomass using Clostridium species: A sustainable pathway for renewable energy
- Open Access
Microbial Valorization of Sunflower Husk for Sustainable Biohydrogen and Biomass Production
Various pretreatment methods for the valorization of sunflower husks (SHs) for H2 gas generation through fermentation by Escherichia coli were investigated. We analyzed thermal treatment (TT), acid hydrolysis (AH), and alkaline hydrolysis (AlkH) at different substrate concentrations (50 g L−1, 75 g L−1, 100 g L−1, and 150 g L−1) and dilution levels (undiluted, 2× diluted, and 5× diluted). A concentration of 75 g L−1 SH that was acid-hydrolyzed and dissolved twice in the medium yielded optimal microbial growth, reaching 0.3 ± 0.1 g cell dry weight (CDW) L−1 biomass. The highest substrate level enabling effective fermentation was 100 g L−1, producing 0.37 ± 0.13 (g CDW) × L−1 biomass after complete fermentation, while 150 g L−1 exhibited pronounced inhibitory effects. It is worth mentioning that the sole alkaline treatment was not optimal for growth and H2 production. Co-fermentation with glycerol significantly enhanced both biomass formation (up to 0.42 ± 0.15 (g CDW) × L−1)) and H2 production. The highest H2 yield was observed during batch growth at 50 g L−1 SH hydrolysate with 5× dilution, reaching up to 5.7 mmol H2 (g sugar)−1 with glycerol supplementation. This study introduces a dual-waste valorization strategy that combines agricultural and biodiesel industry residues to enhance clean energy generation. The novelty lies in optimizing pretreatment and co-substrate fermentation conditions to maximize both biohydrogen yield and microbial biomass using E. coli, a widely studied and scalable host.
Open AccessMicrobial Valorization of Sunflower Husk for Sustainable Biohydrogen and Biomass Production
Various pretreatment methods for the valorization of sunflower husks (SHs) for H2 gas generation through fermentation by Escherichia coli were investigated. We analyzed thermal treatment (TT), acid hydrolysis (AH), and alkaline hydrolysis (AlkH) at different substrate concentrations (50 g L−1, 75 g L−1, 100 g L−1, and 150 g L−1) and dilution levels (undiluted, 2× diluted, and 5× diluted). A concentration of 75 g L−1 SH that was acid-hydrolyzed and dissolved twice in the medium yielded optimal microbial growth, reaching 0.3 ± 0.1 g cell dry weight (CDW) L−1 biomass. The highest substrate level enabling effective fermentation was 100 g L−1, producing 0.37 ± 0.13 (g CDW) × L−1 biomass after complete fermentation, while 150 g L−1 exhibited pronounced inhibitory effects. It is worth mentioning that the sole alkaline treatment was not optimal for growth and H2 production. Co-fermentation with glycerol significantly enhanced both biomass formation (up to 0.42 ± 0.15 (g CDW) × L−1)) and H2 production. The highest H2 yield was observed during batch growth at 50 g L−1 SH hydrolysate with 5× dilution, reaching up to 5.7 mmol H2 (g sugar)−1 with glycerol supplementation. This study introduces a dual-waste valorization strategy that combines agricultural and biodiesel industry residues to enhance clean energy generation. The novelty lies in optimizing pretreatment and co-substrate fermentation conditions to maximize both biohydrogen yield and microbial biomass using E. coli, a widely studied and scalable host.
- Open Access
- 8 July 2025
- Published by Shakarim University in Bulletin of Shakarim University. Technical Sciences
- No. 2(18),p. 177-185
METHODS OF EXTRACTION OF VALUABLE COMPONENTS FROM GRAPE POMACE
This article discusses various methods of extracting valuable components from grape pomace, a byproduct of winemaking. Special attention is given to the effectiveness of traditional and innovative extraction methods, including solvent extraction, as well as new technologies such as solid-liquid extraction, supercritical fluid extraction, ultrasound-assisted extraction, accelerated solvent extraction, and pressurized liquid extraction. For example, supercritical fluid extraction is a relatively new technique for extracting target analytes from solid matrices. Ultrasound-Assisted Extraction is based on the phenomenon of cavitation, where pressure ultrasound waves propagate, and the transfer of extractants is enhanced by high shear forces. Pressurized Liquid Extraction involves using 100% water as the solvent. The research results confirm the high potential of using grape pomace as a raw material for obtaining functional products with antioxidant and anti-inflammatory properties. The process of extracting bioactive compounds, such as polyphenols, proteins, lignin, pectins, and oils, from food waste and by-products of winemaking is becoming an important alternative strategy. The most promising, efficient, sustainable, and environmentally friendly methods are supercritical extraction and ultrasound-assisted extraction.
- 8 July 2025
- Published by Shakarim University in Bulletin of Shakarim University. Technical Sciences
- No. 2(18),p. 177-185
Open AccessMETHODS OF EXTRACTION OF VALUABLE COMPONENTS FROM GRAPE POMACE
This article discusses various methods of extracting valuable components from grape pomace, a byproduct of winemaking. Special attention is given to the effectiveness of traditional and innovative extraction methods, including solvent extraction, as well as new technologies such as solid-liquid extraction, supercritical fluid extraction, ultrasound-assisted extraction, accelerated solvent extraction, and pressurized liquid extraction. For example, supercritical fluid extraction is a relatively new technique for extracting target analytes from solid matrices. Ultrasound-Assisted Extraction is based on the phenomenon of cavitation, where pressure ultrasound waves propagate, and the transfer of extractants is enhanced by high shear forces. Pressurized Liquid Extraction involves using 100% water as the solvent. The research results confirm the high potential of using grape pomace as a raw material for obtaining functional products with antioxidant and anti-inflammatory properties. The process of extracting bioactive compounds, such as polyphenols, proteins, lignin, pectins, and oils, from food waste and by-products of winemaking is becoming an important alternative strategy. The most promising, efficient, sustainable, and environmentally friendly methods are supercritical extraction and ultrasound-assisted extraction.
- Open Access
Fermentation of Sugar Beet Pulp by E. coli for Enhanced Biohydrogen and Biomass Production
This study investigates the potential of sugar beet pulp (SBP), a lignocellulosic by-product of sugar production, as a low-cost substrate for biohydrogen and biomass generation using Escherichia coli under dark fermentation conditions. Two strains—BW25113 wild-type and a genetically engineered septuple mutant—were employed. SBP was pretreated via thermochemical hydrolysis, and the effects of substrate concentration, dilution, and glycerol supplementation were evaluated. Hydrogen production was highly dependent on substrate dilution and nutrient balance. The septuple mutant achieved the highest H2 yield in 30 g L−1 SBP hydrolysate (0.75% sulfuric acid) at 5× dilution with glycerol, reaching 12.06 mmol H2 (g sugar)−1 and 0.28 mmol H2 (g waste)−1, while the wild type under the same conditions yielded 3.78 mmol H2 (g sugar)−1 and 0.25 mmol H2 (g waste)−1. In contrast, undiluted hydrolysates favored biomass accumulation over H2 production, with the highest biomass yield (0.3 g CDW L−1) obtained using the septuple mutant in 30 g L−1 SBP hydrolysate without glycerol. These findings highlight the potential of genetically optimized E. coli and optimized hydrolysate conditions to enhance the valorization of agro-industrial waste, supporting future advances in sustainable hydrogen bioeconomy and integrated waste biorefineries.
Open AccessFermentation of Sugar Beet Pulp by E. coli for Enhanced Biohydrogen and Biomass Production
This study investigates the potential of sugar beet pulp (SBP), a lignocellulosic by-product of sugar production, as a low-cost substrate for biohydrogen and biomass generation using Escherichia coli under dark fermentation conditions. Two strains—BW25113 wild-type and a genetically engineered septuple mutant—were employed. SBP was pretreated via thermochemical hydrolysis, and the effects of substrate concentration, dilution, and glycerol supplementation were evaluated. Hydrogen production was highly dependent on substrate dilution and nutrient balance. The septuple mutant achieved the highest H2 yield in 30 g L−1 SBP hydrolysate (0.75% sulfuric acid) at 5× dilution with glycerol, reaching 12.06 mmol H2 (g sugar)−1 and 0.28 mmol H2 (g waste)−1, while the wild type under the same conditions yielded 3.78 mmol H2 (g sugar)−1 and 0.25 mmol H2 (g waste)−1. In contrast, undiluted hydrolysates favored biomass accumulation over H2 production, with the highest biomass yield (0.3 g CDW L−1) obtained using the septuple mutant in 30 g L−1 SBP hydrolysate without glycerol. These findings highlight the potential of genetically optimized E. coli and optimized hydrolysate conditions to enhance the valorization of agro-industrial waste, supporting future advances in sustainable hydrogen bioeconomy and integrated waste biorefineries.
- Open Access
- 17 May 2025
- Published by Elsevier in Journal of Agriculture and Food Research
- Vol. 22
Use of hydrogen-rich solvent and principal component analysis improves the recovery of phytochemicals from grape wastes
- 17 May 2025
- Published by Elsevier in Journal of Agriculture and Food Research
- Vol. 22
Open AccessUse of hydrogen-rich solvent and principal component analysis improves the recovery of phytochemicals from grape wastes