Shujuan Huang

To address ammonium nitrogen (NH₄⁺-N) and nitrite accumulation in intensive marine shrimp aquaculture, a marine recirculating aquaculture system (RAS) for Penaeus vannamei centered on a moving bed biofilm reactor (MBBR) was constructed to investigate the microbial basis of nitrogen removal. The results showed that the MBBR contributed most to NH₄⁺-N removal, demonstrating favorable nitrification potential under marine conditions (0.513 mg·L⁻¹·h⁻¹). The biofilm carrier formed a complete attached layer and developed a mature biofilm structure. Microbial community analysis revealed clear differentiation between the biofilm and sediment. The biofilm community was dominated by norank_f__Caldilineaceae (9.89%). Linear discriminant analysis effect size identified the nitrifying genus Nitrospira to be significantly enriched on the biofilm side (α = 0.05, linear discriminant analysis > 2.0). In addition, PICRUSt2-based functional prediction suggested a higher potential in biofilm than in sediment for ammonia oxidation and downstream nitrogen transformation, involving ammonia monooxygenase (EC:1.14.99.39), hydroxylamine dehydrogenase (EC:1.7.2.6), nitrate reductase (EC:1.7.99.4), and nitrite reductase (EC:1.7.2.1). Thus, this study provides a microbial basis and process strategy for P. vannamei RAS.

This study extensively analyzed the bacterial information of biofilms and activated sludge in oxic reactors of full-scale moving bed biofilm reactor-integrated fixed-film activated sludge (MBBR-IFAS) systems. The bacterial communities of biofilms and activated sludge differed statistically (R = 0.624, p < 0.01). The denitrifying genera Ignavibacterium, Phaeodactylibacter, Terrimonas, and Arcobacter were more abundant in activated sludge (p < 0.05), while comammox Nitrospira was more abundant in biofilms (p < 0.05), with an average relative abundance of 8.13%. Nitrospira and Nitrosomonas had weak co-occurrence relationships with other genera in the MBBR-IFAS systems. Potential function analysis revealed no differences in pathways at levels 1 and 2 based on the Kyoto Encyclopedia of Genes and Genomes (KEGG) between biofilms and activated sludge. However, in terms of pathways at level 3, biofilms had more potential in 26 pathways, including various organic biodegradation and membrane and signal transportation pathways. In comparison, activated sludge had more potential in only five pathways, including glycan biosynthesis and metabolism. With respect to nitrogen metabolism, biofilms had greater potential for nitrification (ammonia oxidation) (M00528), and complete nitrification (comammox) (M00804) concretely accounted for methane/ammonia monooxygenase (K10944, K10945, and K10946) and hydroxylamine dehydrogenase (K10535). This study provides a theoretical basis for MBBR-IFAS systems from the perspective of microorganisms.