Murat Eser Akyurek
Murat Eser Akyurek has a total of 14 co-authors. Here are the top co-authors by number of shared publications:
- Çağatay Han Türkseven
Department of Biophysics, Faculty of Medicine, Mersin University, Mersin, Türkiye
3 shared publications - Badel Arslan
MERSİN ÜNİVERSİTESİ, SAĞLIK BİLİMLERİ ENSTİTÜSÜ, KÖK HÜCRE VE REJENERATİF TIP ANABİLİM DALI (DİSİPLİNLERARASI), KÖK HÜCRE VE REJENERATİF TIP (DR)
2 shared publications - Gamze Ayar
Department of Stem Cell and Regenerative Medicine, Institute of Health Sciences, Mersin University, Mersin, Turkey
2 shared publications - Gokturk Avsar
Department of Chemistry, Faculty of Sciences, Mersin University, Mersin, Turkey
2 shared publications - Pelin Eroglu
Department of Chemistry, Faculty of Sciences, Mersin University, Mersin, Turkey
2 shared publications - Serdal Arslan
Department of Medical Biology, Faculty of Medicine, Mersin University, Mersin, Turkey
2 shared publications
Latest Publications
- Open Access
- 30 March 2026
- Published by Charles University in Prague, Karolinum Press in Folia Biologica
- Vol. 72 (1) , 44-53
Extraction-Dependent Immunomodulatory and Angiogenesis-Related Molecular Responses of Nigella sativa Oil in Adipose-Derived Mesenchymal Stem Cells
Nigella sativa black cumin oil (BCO) exhibits well-documented anti-inflammatory and antioxidant properties; however, the impact of extraction-related compositional variation on its cellular and molecular effects in stem cell systems remains insufficiently characterized. This study investigated the effects of cold-pressed (CP) and supercritical CO 2 (ScCO 2 )-extracted BCO on the viability, inflammatory response and angiogenic potential of adipose-derived mesenchymal stem cells (ASCs). The oil composition and antioxidant activity were assessed using GC/MS and DPPH assays, respectively. ASCs were treated with different volumes of BCO, and cell viability was evaluated at 24, 48 and 72 h using the MTT assay. Anti-inflammatory effects were evaluated by real-time PCR analysis of IL6 and IL10 mRNA expression, while angiogenesis-related molecular responses were evaluated based on VEGF mRNA expression. Both CP and ScCO 2 -extracted BCO significantly increased ASC viability in a volume-dependent manner, with the highest viability consistently observed at 100 µl (P < 0.05). Treatment with 50 µl and 100 µl of either oil significantly reduced IL6 expression and concomitantly increased IL10 expression at 24 and 48 h (P < 0.05). VEGF expression was also significantly up-regulated at these time points, with ScCO 2 -extracted BCO inducing a more pronounced and sustained angiogenic response (P < 0.05). These findings indicate that BCO enhances ASC viability and molecular responses in a volume-dependent manner, while differences associated with extraction-related compositional variation may modulate inflammation- and angiogenesis-related molecular signalling in ASCs.
- 30 March 2026
- Published by Charles University in Prague, Karolinum Press in Folia Biologica
- Vol. 72 (1) , 44-53
Open AccessExtraction-Dependent Immunomodulatory and Angiogenesis-Related Molecular Responses of Nigella sativa Oil in Adipose-Derived Mesenchymal Stem Cells
Nigella sativa black cumin oil (BCO) exhibits well-documented anti-inflammatory and antioxidant properties; however, the impact of extraction-related compositional variation on its cellular and molecular effects in stem cell systems remains insufficiently characterized. This study investigated the effects of cold-pressed (CP) and supercritical CO 2 (ScCO 2 )-extracted BCO on the viability, inflammatory response and angiogenic potential of adipose-derived mesenchymal stem cells (ASCs). The oil composition and antioxidant activity were assessed using GC/MS and DPPH assays, respectively. ASCs were treated with different volumes of BCO, and cell viability was evaluated at 24, 48 and 72 h using the MTT assay. Anti-inflammatory effects were evaluated by real-time PCR analysis of IL6 and IL10 mRNA expression, while angiogenesis-related molecular responses were evaluated based on VEGF mRNA expression. Both CP and ScCO 2 -extracted BCO significantly increased ASC viability in a volume-dependent manner, with the highest viability consistently observed at 100 µl (P < 0.05). Treatment with 50 µl and 100 µl of either oil significantly reduced IL6 expression and concomitantly increased IL10 expression at 24 and 48 h (P < 0.05). VEGF expression was also significantly up-regulated at these time points, with ScCO 2 -extracted BCO inducing a more pronounced and sustained angiogenic response (P < 0.05). These findings indicate that BCO enhances ASC viability and molecular responses in a volume-dependent manner, while differences associated with extraction-related compositional variation may modulate inflammation- and angiogenesis-related molecular signalling in ASCs.
- Open Access
- 5 March 2025
- Published by Springer Nature in Bratislava Medical Journal
- Vol. 126 (4) , 394-406
Hemp Seed Oils in Stem Cell Therapy: Cold Pressed vs. Supercritical CO2 Extraction?
Objective: This study aims to evaluate the effects of hemp seed oil (HSO) on adipose-derived stem cells (ASCs) to enhance tissue repair, regulate inflammation, and promote angiogenesis. Background: HSO, rich in bioactive compounds, was obtained via cold press (CP) and supercritical carbon dioxide (ScCO2) methods to assess its effects on cytokines and vascular endothelial growth factor (VEGF) in ASCs. Methods: Chemical composition were assessed via gas chromatography-mass spectrometry (GC–MS) and antioxidant activity was determined by measuring the % radical scavenging activity (RSA) with 1,1-diphenyl-2-picrylhydrazyl (DPPH). ASCs were treated with HSO and, cell viability was measured at 24, 48, and 72 h using the methyl thiazolyl tetrazolium (MTT). Gene expression of interleukin-6 (IL-6), interleukin-10 (IL-10), and VEGF was quantified by real-time PCR. Results: The CP-fixed HSO had higher linoleic (48.48%) and oleic acid (29.33%) content than ScCO2-extracted HSO. Phenolic content and antioxidant activity were greater in CP-fixed HSO [57.85 mgGAE (mgGallic Acid Equivalent)/g, 68.8%] than in ScCO2-extracted HSO (58.5 mgGAE/g, 19.9%). Cell viability increased significantly with 75 and 100 µL of CP-fixed HSO at 48 and 72 h (p < 0.05). CP-fixed HSO up-regulated IL-10 and reduced IL-6 at 24 and 48 h (p < 0.05), while also increasing VEGF with 50 and 100 µL at 24 and 48 h (p < 0.05). ScCO2-extracted HSO primarily up-regulated IL-10 but had limited effects on IL-6 and VEGF. Conclusions: CP-fixed HSO had superior phenolic content, antioxidant activity, and enhanced ASC viability, anti-inflammatory effects, and angiogenesis, suggesting strong therapeutic potential for stem cell use.
- 5 March 2025
- Published by Springer Nature in Bratislava Medical Journal
- Vol. 126 (4) , 394-406
Open AccessHemp Seed Oils in Stem Cell Therapy: Cold Pressed vs. Supercritical CO2 Extraction?
Objective: This study aims to evaluate the effects of hemp seed oil (HSO) on adipose-derived stem cells (ASCs) to enhance tissue repair, regulate inflammation, and promote angiogenesis. Background: HSO, rich in bioactive compounds, was obtained via cold press (CP) and supercritical carbon dioxide (ScCO2) methods to assess its effects on cytokines and vascular endothelial growth factor (VEGF) in ASCs. Methods: Chemical composition were assessed via gas chromatography-mass spectrometry (GC–MS) and antioxidant activity was determined by measuring the % radical scavenging activity (RSA) with 1,1-diphenyl-2-picrylhydrazyl (DPPH). ASCs were treated with HSO and, cell viability was measured at 24, 48, and 72 h using the methyl thiazolyl tetrazolium (MTT). Gene expression of interleukin-6 (IL-6), interleukin-10 (IL-10), and VEGF was quantified by real-time PCR. Results: The CP-fixed HSO had higher linoleic (48.48%) and oleic acid (29.33%) content than ScCO2-extracted HSO. Phenolic content and antioxidant activity were greater in CP-fixed HSO [57.85 mgGAE (mgGallic Acid Equivalent)/g, 68.8%] than in ScCO2-extracted HSO (58.5 mgGAE/g, 19.9%). Cell viability increased significantly with 75 and 100 µL of CP-fixed HSO at 48 and 72 h (p < 0.05). CP-fixed HSO up-regulated IL-10 and reduced IL-6 at 24 and 48 h (p < 0.05), while also increasing VEGF with 50 and 100 µL at 24 and 48 h (p < 0.05). ScCO2-extracted HSO primarily up-regulated IL-10 but had limited effects on IL-6 and VEGF. Conclusions: CP-fixed HSO had superior phenolic content, antioxidant activity, and enhanced ASC viability, anti-inflammatory effects, and angiogenesis, suggesting strong therapeutic potential for stem cell use.
- Open Access
- 29 December 2023
- Published by Cukurova Medical Journal in Cukurova Medical Journal
- Vol. 48 (4) , 1365-1373
Duodenal dokuda N6-metiladenozin modifikasyonu üzerine sleeve gastrektomi etkileri
Purpose. In this study, the expression levels of METTL3, METTL14; and WTAP genes involved in the N6-methyladenosine (m6A) pathway, regulating cellular processes including cell renewal, differentiation, invasion; and apoptosis, were investigated in duodenal tissue after sleeve gastrectomy (SG). Material and Methods: Duodenal biopsies were obtained from 24 obese patients before (BG) and 6 months after (AG) sleeve gastrectomy. Pathological evaluation was performed by H&E staining. Expression levels of METTL14, METTL3, and WTAP genes were analysed by Real-Time PCR. Results: The METTL14 gene was significantly increased after surgery (BG-AG Median (Q1-Q3): 0.36 [0.07-1.52]-9.83 [0.20-68.12]). METTL3 (BG-AG Median (Q1-Q3): 0.49 [0.32-0.84]-0.67 [0.36-20.5]) and WTAP (BG-AG Median (Q1-Q3): 0.95 [0.17-7.65]-5.54 [2.34-66.07]) gene expressions were not altered. However, a strong positive (r=0.692) and significant relationship was found between METTL3 and WTAP. Chronic inflammation 81.32 %, intestinal metaplasia 10.54 %, activity 68.88 %, atrophy 5.32 %. No malignant findings were detected. Conclusion: For the first time, we demonstrated that sleeve gastrectomy may increase the expression of the METTL14 gene involved in the m6A-methyladenosine pathway in duodenum. This alteration may lead to gastrointestinal tract diseases.
- 29 December 2023
- Published by Cukurova Medical Journal in Cukurova Medical Journal
- Vol. 48 (4) , 1365-1373
Open AccessDuodenal dokuda N6-metiladenozin modifikasyonu üzerine sleeve gastrektomi etkileri
Purpose. In this study, the expression levels of METTL3, METTL14; and WTAP genes involved in the N6-methyladenosine (m6A) pathway, regulating cellular processes including cell renewal, differentiation, invasion; and apoptosis, were investigated in duodenal tissue after sleeve gastrectomy (SG). Material and Methods: Duodenal biopsies were obtained from 24 obese patients before (BG) and 6 months after (AG) sleeve gastrectomy. Pathological evaluation was performed by H&E staining. Expression levels of METTL14, METTL3, and WTAP genes were analysed by Real-Time PCR. Results: The METTL14 gene was significantly increased after surgery (BG-AG Median (Q1-Q3): 0.36 [0.07-1.52]-9.83 [0.20-68.12]). METTL3 (BG-AG Median (Q1-Q3): 0.49 [0.32-0.84]-0.67 [0.36-20.5]) and WTAP (BG-AG Median (Q1-Q3): 0.95 [0.17-7.65]-5.54 [2.34-66.07]) gene expressions were not altered. However, a strong positive (r=0.692) and significant relationship was found between METTL3 and WTAP. Chronic inflammation 81.32 %, intestinal metaplasia 10.54 %, activity 68.88 %, atrophy 5.32 %. No malignant findings were detected. Conclusion: For the first time, we demonstrated that sleeve gastrectomy may increase the expression of the METTL14 gene involved in the m6A-methyladenosine pathway in duodenum. This alteration may lead to gastrointestinal tract diseases.
- 1 June 2023
- Published by Allerton Press in Molecular Genetics, Microbiology and Virology
- Vol. 38 (2) , 129-136
RNA N6-Methyladenosine Pathway Writer Genes Expression Levels and Clinical Severity of Infection in Covid-19 Patients
Epigenetic modifications are known to be effective in the severity and mortality rate of SARS-CoV-2 infection. N6-methyladenosin (m6A) is a posttranscripti
- 1 June 2023
- Published by Allerton Press in Molecular Genetics, Microbiology and Virology
- Vol. 38 (2) , 129-136
RNA N6-Methyladenosine Pathway Writer Genes Expression Levels and Clinical Severity of Infection in Covid-19 Patients
Epigenetic modifications are known to be effective in the severity and mortality rate of SARS-CoV-2 infection. N6-methyladenosin (m6A) is a posttranscripti