Ikboljon Sobirov
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Ikboljon Sobirov has a total of 24 co-authors. Here are the top co-authors by number of shared publications:
- Mohammad Yaqub
Mohamed bin Zayed University of Artificial Intelligence
8 shared publications - Numan Saeed
Mohamed bin Zayed University of Artificial Intelligence
6 shared publications - Hussain Alasmawi
Mohamed bin Zayed University of Artificial Intelligence
2 shared publications - Kenneth Chan
Acute Multidisciplinary Imaging & Interventional Centre, British Heart Foundation (BHF) Centre of Research Excellence, Division of Cardiovascular Medicine, Radcliffe Department of Medicine, NIHR Oxford Biomedical Research Centre, University of Oxford, Oxford, United Kingdom
2 shared publications - Martin Takáč
MBZUAI Abu Dhabi UAE
2 shared publications - Muhammad Ridzuan
Mohamed bin Zayed University of Artificial Intelligence
2 shared publications
Latest Publications
- 4 October 2024
- Published by Springer Nature
- p. 328-338
HuLP: Human-in-the-Loop for Prognosis
- 2 December 2023
- Published by Springer Nature
- p. 325-337
Super Images - A New 2D Perspective on 3D Medical Imaging Analysis
- 2 December 2023
- Published by Springer Nature
- p. 325-337
Super Images - A New 2D Perspective on 3D Medical Imaging Analysis
- Open Access
Reinforcement Learning for Solving Stochastic Vehicle Routing Problem
This study addresses a gap in the utilization of Reinforcement Learning (RL) and Machine Learning (ML) techniques in solving the Stochastic Vehicle Routing Problem (SVRP) that involves the challenging task of optimizing vehicle routes under uncertain conditions. We propose a novel end-to-end framework that comprehensively addresses the key sources of stochasticity in SVRP and utilizes an RL agent with a simple yet effective architecture and a tailored training method. Through comparative analysis, our proposed model demonstrates superior performance compared to a widely adopted state-of-the-art metaheuristic, achieving a significant 3.43% reduction in travel costs. Furthermore, the model exhibits robustness across diverse SVRP settings, highlighting its adaptability and ability to learn optimal routing strategies in varying environments. The publicly available implementation of our framework serves as a valuable resource for future research endeavors aimed at advancing RL-based solutions for SVRP.
Open AccessReinforcement Learning for Solving Stochastic Vehicle Routing Problem
This study addresses a gap in the utilization of Reinforcement Learning (RL) and Machine Learning (ML) techniques in solving the Stochastic Vehicle Routing Problem (SVRP) that involves the challenging task of optimizing vehicle routes under uncertain conditions. We propose a novel end-to-end framework that comprehensively addresses the key sources of stochasticity in SVRP and utilizes an RL agent with a simple yet effective architecture and a tailored training method. Through comparative analysis, our proposed model demonstrates superior performance compared to a widely adopted state-of-the-art metaheuristic, achieving a significant 3.43% reduction in travel costs. Furthermore, the model exhibits robustness across diverse SVRP settings, highlighting its adaptability and ability to learn optimal routing strategies in varying environments. The publicly available implementation of our framework serves as a valuable resource for future research endeavors aimed at advancing RL-based solutions for SVRP.
- Open Access
- 6 October 2023
- Published by Elsevier in Medical Image Analysis
- Vol. 90, 102989
MGMT promoter methylation status prediction using MRI scans? An extensive experimental evaluation of deep learning models
- 6 October 2023
- Published by Elsevier in Medical Image Analysis
- Vol. 90, 102989
Open AccessMGMT promoter methylation status prediction using MRI scans? An extensive experimental evaluation of deep learning models
- Open Access
- 17 August 2023
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Access
- Vol. 11, 87958-87969
Reinforcement Learning Approach to Stochastic Vehicle Routing Problem With Correlated Demands
We present a novel end-to-end framework for solving the Vehicle Routing Problem with stochastic demands (VRPSD) using Reinforcement Learning (RL). Our formulation incorporates the correlation between stochastic demands through other observable stochastic variables, thereby offering an experimental demonstration of the theoretical premise that non-i.i.d. stochastic demands provide opportunities for improved routing solutions. Our approach bridges the gap in the application of RL to VRPSD and consists of a parameterized stochastic policy optimized using a policy gradient algorithm to generate a sequence of actions that form the solution. Our model outperforms previous state-of-the-art metaheuristics and demonstrates robustness to changes in the environment, such as the supply type, vehicle capacity, correlation, and noise levels of demand. Moreover, the model can be easily retrained for different VRPSD scenarios by observing the reward signals and following feasibility constraints, making it highly flexible and scalable. These findings highlight the potential of RL to enhance the transportation efficiency and mitigate its environmental impact in stochastic routing problems. Our implementation is available online.
- 17 August 2023
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Access
- Vol. 11, 87958-87969
Open AccessReinforcement Learning Approach to Stochastic Vehicle Routing Problem With Correlated Demands
We present a novel end-to-end framework for solving the Vehicle Routing Problem with stochastic demands (VRPSD) using Reinforcement Learning (RL). Our formulation incorporates the correlation between stochastic demands through other observable stochastic variables, thereby offering an experimental demonstration of the theoretical premise that non-i.i.d. stochastic demands provide opportunities for improved routing solutions. Our approach bridges the gap in the application of RL to VRPSD and consists of a parameterized stochastic policy optimized using a policy gradient algorithm to generate a sequence of actions that form the solution. Our model outperforms previous state-of-the-art metaheuristics and demonstrates robustness to changes in the environment, such as the supply type, vehicle capacity, correlation, and noise levels of demand. Moreover, the model can be easily retrained for different VRPSD scenarios by observing the reward signals and following feasibility constraints, making it highly flexible and scalable. These findings highlight the potential of RL to enhance the transportation efficiency and mitigate its environmental impact in stochastic routing problems. Our implementation is available online.
- Open Access
- 19 June 2023
- Published by MDPI AG in Preprints.org
LegoNet: Alternating Model Blocks for Medical Image Segmentation
Since the emergence of convolutional neural networks (CNNs), and later vision transformers (ViTs), the standard paradigm for model development has been using a set of identical block types with varying parameters/hyper-parameters. To leverage the benefits of different architectural designs (e.g., CNNs and ViTs), we propose alternating structurally different types of blocks to generate a new architecture, mimicking how Lego blocks can be assembled. Using two CNN-based and one SwinViT-based blocks, we investigate three variations to the so-called LegoNet that apply the new block alternation concept for the segmentation task in medical imaging. We also study a new clinical problem that has not been investigated before – the right internal mammary artery (RIMA) and perivascular space segmentation from computed tomography angiography (CTA). It was proven to demonstrate a prognostic value to primary cardiovascular outcomes. We compare the model performance against popular CNN and ViT architectures using two large datasets (achieving 0.749 dice similarity coefficient (DSC) on the larger dataset). We also evaluate the model’s performance on three external testing cohorts, where an expert clinician corrected model-segmented results (DSC>0.90 for the three cohorts). To assess our proposed model for suitability in clinical use, we perform intra- and inter-observer variability analysis. Finally, we investigate a joint self-supervised learning approach to determine its impact on model performance.
- 19 June 2023
- Published by MDPI AG in Preprints.org
Open AccessLegoNet: Alternating Model Blocks for Medical Image Segmentation
Since the emergence of convolutional neural networks (CNNs), and later vision transformers (ViTs), the standard paradigm for model development has been using a set of identical block types with varying parameters/hyper-parameters. To leverage the benefits of different architectural designs (e.g., CNNs and ViTs), we propose alternating structurally different types of blocks to generate a new architecture, mimicking how Lego blocks can be assembled. Using two CNN-based and one SwinViT-based blocks, we investigate three variations to the so-called LegoNet that apply the new block alternation concept for the segmentation task in medical imaging. We also study a new clinical problem that has not been investigated before – the right internal mammary artery (RIMA) and perivascular space segmentation from computed tomography angiography (CTA). It was proven to demonstrate a prognostic value to primary cardiovascular outcomes. We compare the model performance against popular CNN and ViT architectures using two large datasets (achieving 0.749 dice similarity coefficient (DSC) on the larger dataset). We also evaluate the model’s performance on three external testing cohorts, where an expert clinician corrected model-segmented results (DSC>0.90 for the three cohorts). To assess our proposed model for suitability in clinical use, we perform intra- and inter-observer variability analysis. Finally, we investigate a joint self-supervised learning approach to determine its impact on model performance.
- Open Access
Super Images -- A New 2D Perspective on 3D Medical Imaging Analysis
In medical imaging analysis, deep learning has shown promising results. We frequently rely on volumetric data to segment medical images, necessitating the use of 3D architectures, which are commended for their capacity to capture interslice context. However, because of the 3D convolutions, max pooling, up-convolutions, and other operations utilized in these networks, these architectures are often more inefficient in terms of time and computation than their 2D equivalents. Furthermore, there are few 3D pretrained model weights, and pretraining is often difficult. We present a simple yet effective 2D method to handle 3D data while efficiently embedding the 3D knowledge during training. We propose transforming volumetric data into 2D super images and segmenting with 2D networks to solve these challenges. Our method generates a super-resolution image by stitching slices side by side in the 3D image. We expect deep neural networks to capture and learn these properties spatially despite losing depth information. This work aims to present a novel perspective when dealing with volumetric data, and we test the hypothesis using CNN and ViT networks as well as self-supervised pretraining. While attaining equal, if not superior, results to 3D networks utilizing only 2D counterparts, the model complexity is reduced by around threefold. Because volumetric data is relatively scarce, we anticipate that our approach will entice more studies, particularly in medical imaging analysis.
Open AccessSuper Images -- A New 2D Perspective on 3D Medical Imaging Analysis
In medical imaging analysis, deep learning has shown promising results. We frequently rely on volumetric data to segment medical images, necessitating the use of 3D architectures, which are commended for their capacity to capture interslice context. However, because of the 3D convolutions, max pooling, up-convolutions, and other operations utilized in these networks, these architectures are often more inefficient in terms of time and computation than their 2D equivalents. Furthermore, there are few 3D pretrained model weights, and pretraining is often difficult. We present a simple yet effective 2D method to handle 3D data while efficiently embedding the 3D knowledge during training. We propose transforming volumetric data into 2D super images and segmenting with 2D networks to solve these challenges. Our method generates a super-resolution image by stitching slices side by side in the 3D image. We expect deep neural networks to capture and learn these properties spatially despite losing depth information. This work aims to present a novel perspective when dealing with volumetric data, and we test the hypothesis using CNN and ViT networks as well as self-supervised pretraining. While attaining equal, if not superior, results to 3D networks utilizing only 2D counterparts, the model complexity is reduced by around threefold. Because volumetric data is relatively scarce, we anticipate that our approach will entice more studies, particularly in medical imaging analysis.
- 17 September 2022
- Published by Springer Nature
- p. 319-329
TMSS: An End-to-End Transformer-Based Multimodal Network for Segmentation and Survival Prediction
- 17 September 2022
- Published by Springer Nature
- p. 319-329
TMSS: An End-to-End Transformer-Based Multimodal Network for Segmentation and Survival Prediction
- Open Access
TMSS: An End-to-End Transformer-based Multimodal Network for Segmentation and Survival Prediction
When oncologists estimate cancer patient survival, they rely on multimodal data. Even though some multimodal deep learning methods have been proposed in the literature, the majority rely on having two or more independent networks that share knowledge at a later stage in the overall model. On the other hand, oncologists do not do this in their analysis but rather fuse the information in their brain from multiple sources such as medical images and patient history. This work proposes a deep learning method that mimics oncologists' analytical behavior when quantifying cancer and estimating patient survival. We propose TMSS, an end-to-end Transformer based Multimodal network for Segmentation and Survival prediction that leverages the superiority of transformers that lies in their abilities to handle different modalities. The model was trained and validated for segmentation and prognosis tasks on the training dataset from the HEad & NeCK TumOR segmentation and the outcome prediction in PET/CT images challenge (HECKTOR). We show that the proposed prognostic model significantly outperforms state-of-the-art methods with a concordance index of 0.763+/-0.14 while achieving a comparable dice score of 0.772+/-0.030 to a standalone segmentation model. The code is publicly available.
Open AccessTMSS: An End-to-End Transformer-based Multimodal Network for Segmentation and Survival Prediction
When oncologists estimate cancer patient survival, they rely on multimodal data. Even though some multimodal deep learning methods have been proposed in the literature, the majority rely on having two or more independent networks that share knowledge at a later stage in the overall model. On the other hand, oncologists do not do this in their analysis but rather fuse the information in their brain from multiple sources such as medical images and patient history. This work proposes a deep learning method that mimics oncologists' analytical behavior when quantifying cancer and estimating patient survival. We propose TMSS, an end-to-end Transformer based Multimodal network for Segmentation and Survival prediction that leverages the superiority of transformers that lies in their abilities to handle different modalities. The model was trained and validated for segmentation and prognosis tasks on the training dataset from the HEad & NeCK TumOR segmentation and the outcome prediction in PET/CT images challenge (HECKTOR). We show that the proposed prognostic model significantly outperforms state-of-the-art methods with a concordance index of 0.763+/-0.14 while achieving a comparable dice score of 0.772+/-0.030 to a standalone segmentation model. The code is publicly available.