Anne Seidel

Pyrrolidinyl-substituted silacyclopentane (CH₂)₄Si(Pyr)₂ and α-amino isobutyric acid (H₂Aib) react with the release of one equivalent pyrrolidine (HPyr) and the formation of the pentacoordinate silicon bis-chelate (Aib)Si(CH₂)₄(HPyr), which features the di-anion of the amino acid as an (O,N)-chelator and one equivalent of pyrrolidine as an additional lone-pair donor. Crystallographic analyses of the chloroform solvate (Aib)Si(CH₂)₄(HPyr)·(CHCl₃), which undergoes a phase transition at 200 K, and a solvent-free modification (Aib)Si(CH₂)₄(HPyr), which features two crystallographically independent molecules of the complex, revealed that the N atom of the HPyr ligand, as well as the carboxylate of Aib, occupy the axial positions in the trigonal bipyramidal Si coordination sphere; the Si–C bonds of the silacyclopentane rest on equatorial sites. For the isolated molecule in a solvent environment, computational analyses revealed that the energy difference between this configuration and the related isomer with an equatorial HPyr and equatorial–axial positioning of the silacyclopentane motif is marginal. In DMSO solution, the adduct (Aib)Si(CH₂)₄(HPyr) decomposed, forming the hexacoordinate Si complex (HAib)₂Si(CH₂)₄ as one of the decomposition products. In a deliberate manner, this compound was accessible from the diethylamino-substituted silacyclopentane (CH₂)₄Si(NEt₂)₂ and H₂Aib with the liberation of diethylamine. (HAib)₂Si(CH₂)₄ features two mono-anions of the α-amino acid as (O,N)-chelators, their carboxylate O atoms are trans-disposed to silacyclopentane, and their NH₂ groups are mutually trans.

The 1:1 stoichiometric reactions of α-amino isobutyric acid (H₂Aib) and diaminosilanes of the type SiRR′(NR¹R²)₂ (SiMe₂(imidazol-1-yl)₂, SiMe₂(NHnPr)₂, and SiRR′(pyrrolidin-1-yl)₂ with R,R′ = Me,Me, Me,H, Me,Vi, and Et,Et) afforded the pentacoordinate silicon complexes (Aib)SiRR′(HNR¹R²) with the release of one equivalent of HNR¹R². Single-crystal X-ray diffraction analyses confirmed the coordination of the N-donor Lewis base (i.e., imidazole, n-propylamine, and pyrrolidine, respectively) in an axial position of the distorted trigonal-bipyramidal Si-coordination sphere, trans to the carboxylate O atom of the Si-chelating Aib-dianion. The N–H moieties of the adduct-forming Lewis bases are involved in N–H⋯O hydrogen bonds with carboxylate groups of adjacent complex molecules, thus supporting the supramolecular structures of these adducts. The equatorially bound NH group of the Aib-dianion is involved in N–H⋯O hydrogen bonds in most cases, and it gives rise to residual dipolar coupling of the ¹⁴N nucleus with its directly bound atoms C and Si, thus causing characteristic shapes of both the ²⁹Si and ¹³C NMR signals of these two atoms in the solid-state spectra. In contrast to the adduct-formation reactions, the analogous conversion of H₂Aib and SiMe₂(NHtBu)₂ did not afford an amine adduct. Instead, a second equivalent of H₂Aib entered the reaction, and the ionic silicon complex [tBuNH₃]⁺[(Aib)₂SiMe]⁻ was obtained and characterized by crystallography and solution NMR spectroscopy.

This review gives an overview of Si-, Ge- and Sn-compounds with (O,N)-bi- and -oligodentate ligands, which have the α-amino carboxylic acid motif N–C(R,R′)–C(=O)O in common (R,R′ = H or hydrocarbyl). While the amino acids themselves are encountered as mono- and di-anionic ligands, modifications at the N-terminus (e.g., extension of the ligand backbone by, e.g., additional alkane carboxylic acid groups) give rise to a wealth of ligands, which bear the α-amino carboxylic acid motif. With particular interest in the coordination features of these ligands, crystallographically characterized complexes are the focus of this review.

In chloroform solution, the reaction of bis(tert-butylamino)dimethylsilane ((tBuNH)₂SiMe₂) and an α-amino acid (α-amino isobutyric acid, H₂Aib; D-phenylglycine, H₂Phg; L-valine, H₂Val) in the presence of N-methylimidazole (NMI) gave rise to the formation of the pentacoordinate silicon complexes (Aib)SiMe₂-NMI, (Phg)SiMe₂-NMI and (Val)SiMe₂-NMI, respectively. Therein, the amino acid building block was a di-anionic bidentate chelator at the silicon atom. In solution, the complexes were involved in rapid coordination–dissociation equilibria between the pentacoordinate Si complex (e.g., (Aib)SiMe₂-NMI) and its constituents NMI and a five-membered silaheterocycle (e.g., (Aib)SiMe₂), as shown by ²⁹Si NMR spectroscopy. The energetics of the Lewis acid-base adduct formation and the competing solvation of the NMI molecule by chloroform were assessed with the aid of computational methods. In CDCl₃ solution, deuteration of the silaheterocycle NH group proceeded rapidly, with more than 50% conversion within two days. Upon cooling to −44 °C, the chloroform solvates of the adducts (Aib)SiMe₂-NMI and (Phg)SiMe₂-NMI crystallized from their parent solutions and allowed for their single-crystal X-ray diffraction analyses. In both cases, the Si atom was situated in a distorted trigonal bipyramidal coordination sphere with equatorial Si–C bonds and an equatorial Si–N bond (the one of the silaheterocycle). The axial positions were occupied by a carboxylate O atom of the silaheterocycle and the NMI ligand’s donor-N-atom.