Jonathan A. Campbell
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Jonathan A. Campbell has a total of 28 co-authors. Here are the top co-authors by number of shared publications:
- Christoffer Nellåker
Nuffield Department of Women’s & Reproductive Health, University of Oxford, Big Data Institute, Oxford, UK
3 shared publications - Cecilia M. Lindgren
Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, UK
2 shared publications - Claudia Vanea
Nuffield Department of Women’s and Reproductive Health, University of Oxford, Oxford, United Kingdom
2 shared publications - Eric Nelson Smith
The University of Texas at Arlington, Arlington, United States of America
2 shared publications - Hagit Hochner
Braun School of Public Health, Hebrew University of Jerusalem, Jerusalem, Israel
2 shared publications - Linda M. Ernst
Department of Pathology and Laboratory Medicine, NorthShore/Endeavor Health, Evanston, IL, USA
2 shared publications
Latest Publications
- 24 July 2024
- Published by Springer Nature
- p. 270-284
Enhancing Cross-Institute Generalisation of GNNs in Histopathology Through Multiple Embedding Graph Augmentation (MEGA)
- 24 July 2024
- Published by Springer Nature
- p. 270-284
Enhancing Cross-Institute Generalisation of GNNs in Histopathology Through Multiple Embedding Graph Augmentation (MEGA)
- 2 December 2023
- Published by Springer Nature
- p. 133-144
Deep Facial Phenotyping with Mixup Augmentation
- 2 December 2023
- Published by Springer Nature
- p. 133-144
Deep Facial Phenotyping with Mixup Augmentation
- Open Access
A New Graph Node Classification Benchmark: Learning Structure from Histology Cell Graphs
We introduce a new benchmark dataset, Placenta, for node classification in an underexplored domain: predicting microanatomical tissue structures from cell graphs in placenta histology whole slide images. This problem is uniquely challenging for graph learning for a few reasons. Cell graphs are large (>1 million nodes per image), node features are varied (64-dimensions of 11 types of cells), class labels are imbalanced (9 classes ranging from 0.21% of the data to 40.0%), and cellular communities cluster into heterogeneously distributed tissues of widely varying sizes (from 11 nodes to 44,671 nodes for a single structure). Here, we release a dataset consisting of two cell graphs from two placenta histology images totalling 2,395,747 nodes, 799,745 of which have ground truth labels. We present inductive benchmark results for 7 scalable models and show how the unique qualities of cell graphs can help drive the development of novel graph neural network architectures.
Open AccessA New Graph Node Classification Benchmark: Learning Structure from Histology Cell Graphs
We introduce a new benchmark dataset, Placenta, for node classification in an underexplored domain: predicting microanatomical tissue structures from cell graphs in placenta histology whole slide images. This problem is uniquely challenging for graph learning for a few reasons. Cell graphs are large (>1 million nodes per image), node features are varied (64-dimensions of 11 types of cells), class labels are imbalanced (9 classes ranging from 0.21% of the data to 40.0%), and cellular communities cluster into heterogeneously distributed tissues of widely varying sizes (from 11 nodes to 44,671 nodes for a single structure). Here, we release a dataset consisting of two cell graphs from two placenta histology images totalling 2,395,747 nodes, 799,745 of which have ground truth labels. We present inductive benchmark results for 7 scalable models and show how the unique qualities of cell graphs can help drive the development of novel graph neural network architectures.
- Open Access
- 16 February 2022
- Published by Universidad Nacional Autonoma de Mexico in Revista Mexicana de Biodiversidad
- Vol. 93, e933933-933933
A new species of blindsnake from Jalisco, Mexico (Squamata: Leptotyphlopidae)
A new snake species of the genus Rena is described from northern Jalisco, Mexico. The new species represents an isolated member of the R. dulcis group in the extreme southwest Mesa Central of the country. We redefine the R. dulcis and R. humilis groups within the genus Rena. The status of the other species allocated to these groups is discussed.
- 16 February 2022
- Published by Universidad Nacional Autonoma de Mexico in Revista Mexicana de Biodiversidad
- Vol. 93, e933933-933933
Open AccessA new species of blindsnake from Jalisco, Mexico (Squamata: Leptotyphlopidae)
A new snake species of the genus Rena is described from northern Jalisco, Mexico. The new species represents an isolated member of the R. dulcis group in the extreme southwest Mesa Central of the country. We redefine the R. dulcis and R. humilis groups within the genus Rena. The status of the other species allocated to these groups is discussed.
- Open Access
- 14 February 2019
- Published by American Mathematical Society (AMS) in Transactions of the American Mathematical Society
- Vol. 371 (11) , 7845-7884
The $K$-theory spectrum of varieties
We produce an $E_\infty$-ring spectrum $K(\mathbf {Var}_{/k})$ whose components model the Grothendieck ring of varieties (over a field $k$) $K_0 (\mathbf {Var}_{/k})$. This is achieved by slightly modifying Waldhausen categories and the Waldhausen $S_\bullet$-construction. As an application, we produce liftings of various motivic measures to spectrum-level maps, including maps into Waldhausen’s $K$-theory of spaces $A(\ast )$ and to $K(\mathbf {Q})$.- 14 February 2019
- Published by American Mathematical Society (AMS) in Transactions of the American Mathematical Society
- Vol. 371 (11) , 7845-7884
Open AccessThe $K$-theory spectrum of varieties
We produce an $E_\infty$-ring spectrum $K(\mathbf {Var}_{/k})$ whose components model the Grothendieck ring of varieties (over a field $k$) $K_0 (\mathbf {Var}_{/k})$. This is achieved by slightly modifying Waldhausen categories and the Waldhausen $S_\bullet$-construction. As an application, we produce liftings of various motivic measures to spectrum-level maps, including maps into Waldhausen’s $K$-theory of spaces $A(\ast )$ and to $K(\mathbf {Q})$. - 24 May 2018
- Published by Magnolia Press in Zootaxa
- Vol. 4422 (3) , 366-384
Systematics of the frogs allocated to Sarcohyla bistincta sensu lato (Cope, 1877), with description of a new species from Western Mexico
A new species of hylid frog is described from the southwestern edge of the Mexican Plateau from the states of Morelos and Mexico through Michoacán and Jalisco, reaching the Sierra Madre Occidental in Sinaloa and western Durango. The new species is part of the widespread Mexican hylid Sarcohyla bistincta (sensu amplo) complex, comprised of S. bistincta, S. pentheter, S. calthula, and S. ephemera. One subspecies of S. bistincta (labeculata) was proposed for an isolated population in Oaxaca. We restrict the group’s nominal species, S. bistincta (sensu stricto), to the Sierra Madre Oriental of Mexico and southward into the Sierra Madre del Sur of Guerrero and Oaxaca. Examination of type material places S. calthula and S. ephemera in the synonymy of S. labeculata (new combination). The species allied to S. bistincta, namely, S. bistincta, S. labeculata, S. pentheter, and the new species described herein, are diagnosed and described following recent suggested taxonomic changes and new available material.
- 24 May 2018
- Published by Magnolia Press in Zootaxa
- Vol. 4422 (3) , 366-384
Systematics of the frogs allocated to Sarcohyla bistincta sensu lato (Cope, 1877), with description of a new species from Western Mexico
A new species of hylid frog is described from the southwestern edge of the Mexican Plateau from the states of Morelos and Mexico through Michoacán and Jalisco, reaching the Sierra Madre Occidental in Sinaloa and western Durango. The new species is part of the widespread Mexican hylid Sarcohyla bistincta (sensu amplo) complex, comprised of S. bistincta, S. pentheter, S. calthula, and S. ephemera. One subspecies of S. bistincta (labeculata) was proposed for an isolated population in Oaxaca. We restrict the group’s nominal species, S. bistincta (sensu stricto), to the Sierra Madre Oriental of Mexico and southward into the Sierra Madre del Sur of Guerrero and Oaxaca. Examination of type material places S. calthula and S. ephemera in the synonymy of S. labeculata (new combination). The species allied to S. bistincta, namely, S. bistincta, S. labeculata, S. pentheter, and the new species described herein, are diagnosed and described following recent suggested taxonomic changes and new available material.
- 1 December 2015
- Published by Brazilian Herpetological Society in South American Journal of Herpetology
- Vol. 10 (3) , 187-194
Taxonomic Review of the Populations of the Fringe-Limbed Treefrogs (Hylidae:Ecnomiohyla) in Mexico and Nuclear Central America
The members of the genus Ecnomiohyla from Mexico and Nuclear Central America have had their taxonomic names applied inconsistently in the literature, notably with much confusion surrounding specimens from the Maya Mountains of Belize. We refer those individuals to E. minera and, based on examination of almost all known specimens of Ecnomiohyla from Mexico, Guatemala, Belize, and Honduras, provide revised diagnoses for the recognized species: E. echinata, E. minera, E. salvaje, and E. valancifer. These frogs are rarely encountered and some species have not been seen in many decades.
- 1 December 2015
- Published by Brazilian Herpetological Society in South American Journal of Herpetology
- Vol. 10 (3) , 187-194
Taxonomic Review of the Populations of the Fringe-Limbed Treefrogs (Hylidae:Ecnomiohyla) in Mexico and Nuclear Central America
The members of the genus Ecnomiohyla from Mexico and Nuclear Central America have had their taxonomic names applied inconsistently in the literature, notably with much confusion surrounding specimens from the Maya Mountains of Belize. We refer those individuals to E. minera and, based on examination of almost all known specimens of Ecnomiohyla from Mexico, Guatemala, Belize, and Honduras, provide revised diagnoses for the recognized species: E. echinata, E. minera, E. salvaje, and E. valancifer. These frogs are rarely encountered and some species have not been seen in many decades.