RMRupasree Mukhopadhyay

Rupasree Mukhopadhyay

*This is an algorithmically generated author record based on publicly available information.

Rupasree Mukhopadhyay has a total of 8 co-authors. Here are the top co-authors by number of shared publications:


Latest Publications

  • Next-generation sequencing-assisted DNA barcoding and genome analysis of Rivina humilis

    by Gatla Harika, Rupasree Mukhopadhyay, P.R. Sushama

    Adequate naming of medically significant plant species is crucial to the conservation of biodiversity, taxonomic verification and contaminating mixtures of herbs. The current research was intended to molecularly verify Rivina humilis with the help of chloroplast DNA barcoding. Genomic DNA was amplified of the chloroplast ribulose-1, 5 -bisphosphate carboxylase large subunit gene region followed by bidirectional sequencing. Forward and reverse sequences were combined together such that they gave a good consensus sequence to be used in comparative analysis. The identification of species was done by sequence similarity search that was made against distribution databases that were being made publicly. The resultant sequence was exhibiting high percentage identity and full query coverage to the validated accessions of R. humilis and statistically important scores of alignment. Phylogenetic analysis also served as a creation of confirmation that the species was identified through a clustering of the study sample within the R. humilis clade that had high support through bootstrap. The amplification produced only one distinct fragment of around 600 base pairs which was a sign of specificity and no contamination. The results indicated that DNA barcoding based on chloroplast genes was an accurate and consistent process of molecular authentication of the species. The produced validated molecular data was ahead of creating reference barcode libraries and augmenting the taxonomic identification. The findings justified the use of molecular identification tools in the study of medicinal plants, measuring biodiversity and conservation of wild plants as well as quality advances of plant products.

  • Open Access

    The Occurrence, Uses, Biosynthetic Pathway, and Biotechnological Production of Plumbagin, a Potent Antitumor Naphthoquinone

    by Polavarapu B. Kavi Kishor, Bangaru Naidu Thaddi, Rajasheker Guddimalli, Tukaram Dayaram Nikam, Krothapalli Raja Surya Sambasiva Rao, Rupasree Mukhopadhyay, Prashant Singam

    Plumbagin is an important naphthoquinone with potent anticancer properties besides multitudinous uses in healthcare. It is produced in a limited number of species and families but mostly in the roots of Plumbaginaceae family members. The biosynthetic pathway and the genes that regulate plumbagin synthesis are not completely known, but details of these are being revealed. Several species, including Plumbago, Drosera, and others, are being uprooted for the extraction of plumbagin by pharmaceutical industries, leading to the destruction of natural habitats. The pharmaceutical industry is therefore facing an acute shortage of plant material. This necessitates enhancing the accumulation of plumbagin using suspensions and hairy roots to meet market demands. Many factors, such as the aggregate size of the inoculum, stability of the culture, and the sequential effects of elicitors, immobilization, and permeabilization, have been demonstrated to act synergistically and markedly augment plumbagin accumulation. Hairy root cultures can be used for the large-scale production, growth, and plumbagin accumulation, and the exploration of their efficacy is now imperative. The secretion of compounds into the spent medium and their in situ adsorption via resin has remarkable potential, but this has not been thoroughly exploited. Improvements in the quality of biomass, selection of cell lines, and production of plumbagin in bioreactors have thus far been sporadic, and these parameters need to be further exploited. In this review, we report the advances made relating to the importance of stable cell line selection for the accumulation of compounds in long-term cultures, hairy root cultures for the accumulation of plumbagin, and its semicontinuous production via total cell recycling in different types of bioreactors. Such advances might pave the way for industrial exploitation. The steps in the biosynthetic pathway that are currently understood might also aid us in isolating the relevant genes in order to examine the effects of their overexpression or heterologous downregulation or to edit the genome using CRISPR-Cas9 technology in order to enhance the accumulation of plumbagin. Its potential as an anticancer molecule and its mode of action have been amply demonstrated, but plumbagin has not been exploited in clinics due to its insolubility in water and its highly lipophilic nature. Plumbagin-loaded nanoemulsions, plumbagin–silver, or albumin nanoparticle formulations can overcome these problems relating to its solubility and are currently being tried to improve its bioavailability and antiproliferative activities, as discussed in the current paper.