DSDaniil I. Sakharov

Daniil I. Sakharov

*This is an algorithmically generated author record based on publicly available information.

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Daniil I. Sakharov has a total of 12 co-authors. Here are the top co-authors by number of shared publications:


Latest Publications

  • Open Access

    Thermally Induced lux-Operon Promoter of Photorhabdus hainanensis and Photorhabdus temperata

    by Vadim V. Fomin, Valeriia O. Matveeva, Kamilla V. Mekhantseva, Daniil I. Sakharov, Sergei E. Spiridonov, Sergey V. Bazhenov, Nanette Hope Sumaya, Ilya V. Manukhov

    The bioluminescence of entomopathogenic bacteria of the genus Photorhabdus was considered to be constitutive. However, it has recently been shown that under heat shock conditions, lux-operon is activated in Photorhabdus temperata cells. In the present study, bioluminescence thermoactivation was investigated in two isolated strains, Photorhabdus hainanensis FV2401 and P. temperata FV2402. The luminescence of the more thermotolerant P. hainanensis cells was activated at higher temperatures than that of P. temperata. At the maximum induction temperatures of 37 °C for FV2401 and 34 °C for FV2402, higher bioluminescence activation was observed in FV2401, whereas the increase in lux-genes mRNA levels was approximately the same in both strains. In P. hainanensis, elevated temperatures also affected the expression of the hexA, madB, and csrB genes, which are indirectly involved in luminescence in Photorhabdus. The heat-activated lux-operon promoter in P. hainanensis and P. temperata was determined. This is a σ70-dependent promoter that differs in its distance from the luxC start codon. When promoter variants with or without the 5′-UTR mRNA were transferred to the heterologous Escherichia coli system, heat activation of luminescence was retained in constructs containing only the promoter and was independent of σ32 and σE, whereas constructs with the 5′-UTR exhibited repression of luminescence following thermoactivation. The obtained data on the temperature-induced promoter of the lux-operon can broaden understanding of the ecological and biological functions of Photorhabdus bioluminescence under heat shock conditions and provide a basis for the development of novel biosensors.

  • Open Access

    Features of Chaperone Induction by 9-Aminoacridine and Acridine Orange

    by Vadim V. Fomin, Svetlana V. Smirnova, Sergey V. Bazhenov, Aminat G. Kurkieva, Nikolay A. Bondarev, Daria M. Egorenkova, Daniil I. Sakharov, Ilya V. Manukhov, Serikbai K. Abilev

    The fluorescent dyes 9-aminoacridine (9-AA) and acridine orange (AO) are known mutagens that induce frameshift mutations in cells by intercalating between DNA bases. However, these chemicals can also affect other cellular components, such as proteins. In this study, we tested the ability of 9-AA and AO to induce heat shock in bacteria using the following methods: lux-biosensors based on Escherichia coli cells with the luxCDABE genes transcriptionally fused to heat shock-specific inducible promoters, RT-qPCR, and nanoDSF. We demonstrated that acridine dyes not only induce mutagenesis but also cause heat shock in bacterial cells. AO significantly reduced the melting temperature of proteins and strongly activated σE- and σ32-dependent promoters, but not PluxC, which is activated by elevated temperatures via a different mechanism. In contrast, 9-AA weakly denatured the proteins and induced the σE-dependent promoter; however, it activated the σ32-dependent promoters and PluxC, supporting the hypothesis that the σ32 heat shock response system is activated via hairpin RNA denaturation by 9-AA. The study on the application of lux-biosensors was hampered by the high general toxicity and luminescence shielding effect of AO, and RT-qPCR’s sensitivity was insufficient for detection of the response to 9-AA. Thus, methodologically, it is justified to conduct a comprehensive study of substances that cause heat shock or affect bioluminescence by both RT-qPCR and lux-biosensors.