Shufan Zhang
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Shufan Zhang has a total of 8 co-authors. Here are the top co-authors by number of shared publications:
- Xiaoshan Dong
Xinjiang Production and Construction Corps Key Laboratory of Protection and Utilization of Biological Resources in Tarim Basin, College of Life Science, Tarim University, Alar 843300, China
2 shared publications - Jia Zheng
Wuliangye Yibin Co., Ltd., Yibin 644000, China
1 shared publication - Jianhao Sun
Xinjiang Production and Construction Corps Key Laboratory of Protection and Utilization of Biological Resources in Tarim Basin, College of Life Science, Tarim University, Alar 843300, China
1 shared publication - Kunyi Liu
School of Wuliangye Technology and Food Engineering Yibin Vocational and Technical College Yibin Sichuan China
1 shared publication - Lili Ji
Meat Processing Key Laboratory of Sichuan Province, Chengdu University, Chengdu 610106, China
1 shared publication - Peipei Jiao
Xinjiang Production and Construction Corps Key Laboratory of Protection and Utilization of Biological Resources in Tarim Basin, College of Life Science, Tarim University, Alar 843300, China
1 shared publication
Latest Publications
- Open Access
- 28 October 2026
- Published by MDPI AG in Current Issues in Molecular Biology
- Vol. 48 (11) , 1124
Genome-Wide Analysis of the PIN-FORMED Gene Family in Populus euphratica and Functional Characterization of PePIN1a Through Heterologous Expression in Arabidopsis thaliana
PIN-FORMED (PIN) auxin efflux carriers are key regulators of polar auxin transport, a process that controls plant organ morphogenesis and adaptive development. Nevertheless, genome-wide information on the PIN gene family in Populus euphratica Oliv. is limited, and how PIN homologs function during its distinctive heterophyllous leaf development remains unknown. Here, we systematically identified PIN genes throughout the P. euphratica genome and examined the subcellular localization and developmental effects of heterologously expressed PePIN1a in Arabidopsis thaliana. Bioinformatic analyses revealed 32 PePIN genes on 13 chromosomes and scaffolds, with segmental duplication contributing substantially to family expansion. Phylogenetic reconstruction resolved three PePIN subfamilies whose members exhibited conserved gene structures, protein motifs, and functional domains. Analysis of cis-acting elements indicated that most PePIN genes contained multiple elements responsive to hormones, light, and abiotic stress. Transcriptomic comparisons of four leaf morphotypes (linear, lanceolate, ovate, and broad-ovate) revealed relatively high PePIN1a expression in leaf tissues. Its greater expression in broad-ovate than in linear leaves prompted its selection for further functional validation. Subcellular localization assays revealed peripheral fluorescence from 35S::PePIN1a-GFP, consistent with association with the plasma membrane. In A. thaliana, PePIN1a overexpression significantly increased the number of rosette leaves relative to wild-type plants, while expression in the pin1 mutant rescued the reduced-leaf-number phenotype. These results systematically characterize the P. euphratica PIN family and show that PePIN1a alters rosette leaf number and exhibits PIN1-like activity in A. thaliana. PePIN1a is therefore a candidate for further studies of heterophyllous leaf development in P. euphratica. Because functional assays were conducted only in A. thaliana, its native role in P. euphratica heterophylly still requires validation.
- 28 October 2026
- Published by MDPI AG in Current Issues in Molecular Biology
- Vol. 48 (11) , 1124
Open AccessGenome-Wide Analysis of the PIN-FORMED Gene Family in Populus euphratica and Functional Characterization of PePIN1a Through Heterologous Expression in Arabidopsis thaliana
PIN-FORMED (PIN) auxin efflux carriers are key regulators of polar auxin transport, a process that controls plant organ morphogenesis and adaptive development. Nevertheless, genome-wide information on the PIN gene family in Populus euphratica Oliv. is limited, and how PIN homologs function during its distinctive heterophyllous leaf development remains unknown. Here, we systematically identified PIN genes throughout the P. euphratica genome and examined the subcellular localization and developmental effects of heterologously expressed PePIN1a in Arabidopsis thaliana. Bioinformatic analyses revealed 32 PePIN genes on 13 chromosomes and scaffolds, with segmental duplication contributing substantially to family expansion. Phylogenetic reconstruction resolved three PePIN subfamilies whose members exhibited conserved gene structures, protein motifs, and functional domains. Analysis of cis-acting elements indicated that most PePIN genes contained multiple elements responsive to hormones, light, and abiotic stress. Transcriptomic comparisons of four leaf morphotypes (linear, lanceolate, ovate, and broad-ovate) revealed relatively high PePIN1a expression in leaf tissues. Its greater expression in broad-ovate than in linear leaves prompted its selection for further functional validation. Subcellular localization assays revealed peripheral fluorescence from 35S::PePIN1a-GFP, consistent with association with the plasma membrane. In A. thaliana, PePIN1a overexpression significantly increased the number of rosette leaves relative to wild-type plants, while expression in the pin1 mutant rescued the reduced-leaf-number phenotype. These results systematically characterize the P. euphratica PIN family and show that PePIN1a alters rosette leaf number and exhibits PIN1-like activity in A. thaliana. PePIN1a is therefore a candidate for further studies of heterophyllous leaf development in P. euphratica. Because functional assays were conducted only in A. thaliana, its native role in P. euphratica heterophylly still requires validation.
- Open Access
Interaction and Flavor Metabolic Function of Microbiota During Fermentation of Pigskin Through Bioaugmentation with Latilactobacillus sakei
Pigskin, a major byproduct of pork processing, has high protein content and low fat, endowing it with considerable market value for food applications. In this study, bioaugmented fermentation with Latilactobacillus sakei YBZY-W5, a strain previously isolated from traditional fermented pigskin, was applied to pigskin to systematically evaluate its effects on physicochemical parameters, microbial community succession, and volatile flavor compound (VFC) profiles over 20 days. The results showed that moisture and pH significantly decreased, while total volatile basic nitrogen (TVB-N) and thiobarbituric acid reactive substances (TBARSs) increased with fermentation time. High-throughput sequencing revealed that Lactobacilli, Fusarium and Aspergillus dominated early fermentation and were gradually replaced by Bacillus, Hanseniaspora and Debaryomyces. A total of 493 VFCs were identified, among which terpenoids, heterocyclic compounds, and alcohols were the most abundant classes. Orthogonal partial least squares discriminant analysis (OPLS-DA) identified numerous differentially changed VFCs (DCVFCs) during fermentation. Odor activity value (OAV) analysis indicated that green, meaty, and woody notes dominated initially, while sour, floral, sweet, and fruity characteristics became increasingly prominent after fermentation. Pearson correlation analysis demonstrated significant associations between key microorganisms (Lactobacilli, Bacillus, Hanseniaspora, Debaryomyces) and DCVFCs (e.g., β-myrcene, ethyl hexanoate, hexanoic acid, ethyl ester, pyrazines). Collectively, bioaugmented fermentation with Ltb. sakei YBZY-W5 effectively modulated the physicochemical and microbial profiles of pigskin, enriched desirable flavor compounds, and reduced unpleasant odor, confirming its feasibility for producing high-quality fermented pigskin products. This study provides an experimental basis for the value-added utilization of pigskin and promotes sustainable development of the pork industry.
Open AccessInteraction and Flavor Metabolic Function of Microbiota During Fermentation of Pigskin Through Bioaugmentation with Latilactobacillus sakei
Pigskin, a major byproduct of pork processing, has high protein content and low fat, endowing it with considerable market value for food applications. In this study, bioaugmented fermentation with Latilactobacillus sakei YBZY-W5, a strain previously isolated from traditional fermented pigskin, was applied to pigskin to systematically evaluate its effects on physicochemical parameters, microbial community succession, and volatile flavor compound (VFC) profiles over 20 days. The results showed that moisture and pH significantly decreased, while total volatile basic nitrogen (TVB-N) and thiobarbituric acid reactive substances (TBARSs) increased with fermentation time. High-throughput sequencing revealed that Lactobacilli, Fusarium and Aspergillus dominated early fermentation and were gradually replaced by Bacillus, Hanseniaspora and Debaryomyces. A total of 493 VFCs were identified, among which terpenoids, heterocyclic compounds, and alcohols were the most abundant classes. Orthogonal partial least squares discriminant analysis (OPLS-DA) identified numerous differentially changed VFCs (DCVFCs) during fermentation. Odor activity value (OAV) analysis indicated that green, meaty, and woody notes dominated initially, while sour, floral, sweet, and fruity characteristics became increasingly prominent after fermentation. Pearson correlation analysis demonstrated significant associations between key microorganisms (Lactobacilli, Bacillus, Hanseniaspora, Debaryomyces) and DCVFCs (e.g., β-myrcene, ethyl hexanoate, hexanoic acid, ethyl ester, pyrazines). Collectively, bioaugmented fermentation with Ltb. sakei YBZY-W5 effectively modulated the physicochemical and microbial profiles of pigskin, enriched desirable flavor compounds, and reduced unpleasant odor, confirming its feasibility for producing high-quality fermented pigskin products. This study provides an experimental basis for the value-added utilization of pigskin and promotes sustainable development of the pork industry.