Orchestrating the expression levels of sperm mRNAs reveals CCDC174 as an important determinant of semen quality and bull fertility
- 15 November 2020
- journal article
- research article
- Published by Taylor & Francis in Systems Biology in Reproductive Medicine
- Vol. 67 (1) , 89-101
Abstract
Bulls with acceptable semen quality vary in actual field fertility and this can be elucidated by studying the expression levels of mRNAs in the sperm. The present study aimed at assessing the variations in the sperm gene expression levels of PRM1, CCDC174, RPL36A, TMCO2, SWI5 and OIT3 in bulls differing in fertility status. Frozen semen samples from Holstein-Friesian bulls were classified into high-fertile (n = 8, average field conception rate = 46.1 ± 0.51, p < 0.001) and sub-fertile (n = 7, average field conception rate = 39.4 ± 0.69) groups. In the post-thaw semen samples, sperm kinematics, structural and functional membrane integrities, mitochondrial membrane potential and chromatin distribution were analyzed. The sperm total RNA was subjected to gene expression studies by Real-Time PCR. Multivariate regression analysis was performed using gene expression levels and conception rates. The sperm functional attributes did not differ significantly between the groups. The relative mRNA levels (fold change) of CCDC174 (6.20), RPL36A (4.66), SWI5 (1.86) and OIT3 (1.53) were higher in high-fertile bulls. Further, the expression level of the CCDC174 gene was significantly (p = 0.02) up-regulated in high-fertile bulls. The fertility prediction multivariate model with genes, CCDC174, RPL36A, TMCO2 and OIT3 had the maximum coefficient of determination (R2 = 0.68) with the field conception rate. This model had 93.3% bull fertility prediction accuracy with 100% sensitivity and 87.5% specificity. The study suggests that the expression level of CCDC174 can be used as a potential marker for assessing bull fertility.Keywords
Funding Information
- ICAR
- Indian Council of Agricultural Research (ICAR-National Fellow Project)
This publication has 41 references indexed in Scilit:
- Multiple Ribosomal Proteins Are Expressed at High Levels in Developing Zebrafish Endoderm and Are Required for Normal Exocrine Pancreas DevelopmentZebrafish, 2013
- Mutations inCCDC39andCCDC40are the Major Cause of Primary Ciliary Dyskinesia with Axonemal Disorganization and Absent Inner Dynein ArmsHuman Mutation, 2013
- Differential Proteomics Leads to Identification of Domain‐Specific Epididymal Sperm ProteinsJournal of Andrology, 2011
- Semen analysis and sperm function tests: How much to test?Indian Journal of Urology, 2011
- Role for the Mammalian Swi5-Sfr1 Complex in DNA Strand Break Repair through Homologous RecombinationPLOS Genetics, 2010
- DNA damage and repair in human oocytes and embryos: a reviewZygote, 2010
- Why is it getting more difficult to successfully artificially inseminate dairy cows?Animal, 2008
- The Preparation of Human Spermatozoal RNA for Clinical AnalysisArchives of Andrology, 2007
- A novel mechanism of protamine expression deregulation highlighted by abnormal protamine transcript retention in infertile human males with sperm protamine deficiencyMolecular Human Reproduction, 2006
- Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT MethodMethods, 2001