Zijian Xu
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Zijian Xu has a total of 141 co-authors. Here are the top co-authors by number of shared publications:
- Renzhong Tai
Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 201800, China
8 shared publications Xiangzhi Zhang
Shanghai Advanced Research Institute, Chinese Academy of Sciences
8 shared publications- Chunpeng Wang
Shanghai Synchrotron Radiation Facility, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201210, China
7 shared publications - Renzhong Tai
Shanghai Synchrotron Radiation Facility, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, China
7 shared publications - Xiangzhi Zhang
Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 201800, People's Republic of China
7 shared publications Renzhong Tai
6 shared publications
Latest Publications
- Open Access
Sparse-Scan Ptychography with Hybrid-Overlap Scanning and Reference-Guided Probe Updates
Sparse-scan ptychography accelerates data acquisition but compromises the overlap-induced redundancy essential for stable blind reconstruction. In low-overlap cases, object errors are often transferred to the probe update, causing crosstalk and artifacts. In this work, we propose a sparse-scan ptychography method termed hybrid-scan ptychography, which combines a hybrid-overlap scanning strategy with a reference-guided ePIE reconstruction algorithm. In this method, a localized high-overlap scan is used to establish a reliable probe estimate for reconstructing a wide field of view scanned on a low-overlap grid. As a stabilizing prior, this probe estimate is integrated into the ePIE probe update for the low-overlap region through an additional quadratic regularization term, thereby ensuring accurate probe reconstruction for sparse-scan region. This method effectively suppresses sparse-scan artifacts and ensures robust, high-fidelity reconstruction, as demonstrated by numerical simulations and soft X-ray ptychography experiments. With the new method, the acquisition efficiency of ptychography can be increased by at least 2 times without significant resolution reduction.
Open AccessSparse-Scan Ptychography with Hybrid-Overlap Scanning and Reference-Guided Probe Updates
Sparse-scan ptychography accelerates data acquisition but compromises the overlap-induced redundancy essential for stable blind reconstruction. In low-overlap cases, object errors are often transferred to the probe update, causing crosstalk and artifacts. In this work, we propose a sparse-scan ptychography method termed hybrid-scan ptychography, which combines a hybrid-overlap scanning strategy with a reference-guided ePIE reconstruction algorithm. In this method, a localized high-overlap scan is used to establish a reliable probe estimate for reconstructing a wide field of view scanned on a low-overlap grid. As a stabilizing prior, this probe estimate is integrated into the ePIE probe update for the low-overlap region through an additional quadratic regularization term, thereby ensuring accurate probe reconstruction for sparse-scan region. This method effectively suppresses sparse-scan artifacts and ensures robust, high-fidelity reconstruction, as demonstrated by numerical simulations and soft X-ray ptychography experiments. With the new method, the acquisition efficiency of ptychography can be increased by at least 2 times without significant resolution reduction.
- 5 June 2026
- Published by Elsevier in Water Research
- Vol. 303, 126255
Precisely regulating the microenvironment towards robust active site for antibiotics degradation via Fenton-like reaction
- 5 June 2026
- Published by Elsevier in Water Research
- Vol. 303, 126255
Precisely regulating the microenvironment towards robust active site for antibiotics degradation via Fenton-like reaction
- 21 May 2026
- Published by Optica Publishing Group in Optics Express
- Vol. 34 (11) , 19972-19985
Correction of rotational position error in Fourier space for ptychography
X-ray ptychography has an ultrahigh resolution at the nanoscale and an extended field of view, making it widely used in many cutting-edge fields. In this technique, precisely determining the scanning position is crucial for improving imaging quality and resolution. In this study, we propose and validate a novel method for correcting rotational position errors in ptychography. This method combines the Fourier-space bisection search with the ptychography reconstruction algorithm. By progressively rotating the diffraction pattern in Fourier space and continuously narrowing the predicted angular error interval based on the reconstruction errors from inner loops, the method iteratively approaches and determines the deflection angle of the detector plane relative to the sample plane (around the optical axis). This method can correct rotational angle errors efficiently in Fourier space and is highly robust against uncertainties in experimental parameters and diffraction signal quality. Both simulation and experimental reconstructions demonstrate the method's capability to precisely correct rotational errors and recover fine sample structures, thereby improving imaging resolution.
- 21 May 2026
- Published by Optica Publishing Group in Optics Express
- Vol. 34 (11) , 19972-19985
Correction of rotational position error in Fourier space for ptychography
X-ray ptychography has an ultrahigh resolution at the nanoscale and an extended field of view, making it widely used in many cutting-edge fields. In this technique, precisely determining the scanning position is crucial for improving imaging quality and resolution. In this study, we propose and validate a novel method for correcting rotational position errors in ptychography. This method combines the Fourier-space bisection search with the ptychography reconstruction algorithm. By progressively rotating the diffraction pattern in Fourier space and continuously narrowing the predicted angular error interval based on the reconstruction errors from inner loops, the method iteratively approaches and determines the deflection angle of the detector plane relative to the sample plane (around the optical axis). This method can correct rotational angle errors efficiently in Fourier space and is highly robust against uncertainties in experimental parameters and diffraction signal quality. Both simulation and experimental reconstructions demonstrate the method's capability to precisely correct rotational errors and recover fine sample structures, thereby improving imaging resolution.
- 26 March 2026
- Published by American Physical Society (APS) in Physical Review B
- Vol. 113 (10)
Stabilizing and tuning superconductivity in La 3 Ni 2 O 7 − δ films: Oxygen recycling protocol reveals hole-doping analogue
- 26 March 2026
- Published by American Physical Society (APS) in Physical Review B
- Vol. 113 (10)
Stabilizing and tuning superconductivity in La 3 Ni 2 O 7 − δ films: Oxygen recycling protocol reveals hole-doping analogue
- 21 March 2026
- Published by Elsevier in Optics & Laser Technology
- Vol. 200
Adaptive relaxation parameters tuning strategy for ePIE algorithm
- 21 March 2026
- Published by Elsevier in Optics & Laser Technology
- Vol. 200
Adaptive relaxation parameters tuning strategy for ePIE algorithm
- 17 February 2026
- Published by Optica Publishing Group in Optics Express
- Vol. 34 (4) , 6677-6694
Large field-of-view ptychographic imaging with a large probe and an iterative partition reconstruction method
X-ray ptychography has the advantage of nanoscale resolution and extended field-of-view (FOV), which has led to its widespread application in many cutting-edge research fields. Currently, the technique faces the following challenges: greatly increased time cost for large FOV and increased reconstruction difficulty due to large data volume. In this study, we present a synergistic method to improve the efficiency of large FOV ptychography by integrating a large-probe large-step scanning strategy with an iterative partition reconstruction (IPR) algorithm. To increase the probe size beyond the detector Fourier window, we develop an upsampling-multimode fusion algorithm that enables ptychography scan with a step size over 5 µm using only stepper motors, thus improving the acquisition efficiency by more than 12 times compared to conventional ptychography and STXM. Meanwhile, we propose an IPR method with an adaptive sample splicing mechanism for raster scan or partition scan, which effectively suppresses the artifacts due to probe variations, significantly reduces the hardware requirements for reconstruction while improving reconstruction efficiency, and eliminates 10% overlapping redundancy in conventional tile scan, further improving efficiency. Verification experiments using probes of 20 and 25 µm demonstrated the performance of the developed strategy, which provides a new solution for high-resolution, large FOV ptychography.
- 17 February 2026
- Published by Optica Publishing Group in Optics Express
- Vol. 34 (4) , 6677-6694
Large field-of-view ptychographic imaging with a large probe and an iterative partition reconstruction method
X-ray ptychography has the advantage of nanoscale resolution and extended field-of-view (FOV), which has led to its widespread application in many cutting-edge research fields. Currently, the technique faces the following challenges: greatly increased time cost for large FOV and increased reconstruction difficulty due to large data volume. In this study, we present a synergistic method to improve the efficiency of large FOV ptychography by integrating a large-probe large-step scanning strategy with an iterative partition reconstruction (IPR) algorithm. To increase the probe size beyond the detector Fourier window, we develop an upsampling-multimode fusion algorithm that enables ptychography scan with a step size over 5 µm using only stepper motors, thus improving the acquisition efficiency by more than 12 times compared to conventional ptychography and STXM. Meanwhile, we propose an IPR method with an adaptive sample splicing mechanism for raster scan or partition scan, which effectively suppresses the artifacts due to probe variations, significantly reduces the hardware requirements for reconstruction while improving reconstruction efficiency, and eliminates 10% overlapping redundancy in conventional tile scan, further improving efficiency. Verification experiments using probes of 20 and 25 µm demonstrated the performance of the developed strategy, which provides a new solution for high-resolution, large FOV ptychography.
- Open Access
- 6 August 2025
- Published by Royal Society of Chemistry (RSC) in Chemical Communications
- Vol. 61 (71) , 13413-13416
A clickable spherical nucleic acid probe for fluorescence and synchrotron radiation X-ray dual-modality imaging
This study developed a novel Click-SNAs dual-mode probe based on click chemistry, which achieved high specificity fluorescence and synchrotron X-ray microscopy imaging of neuronal cells.
- 6 August 2025
- Published by Royal Society of Chemistry (RSC) in Chemical Communications
- Vol. 61 (71) , 13413-13416
Open AccessA clickable spherical nucleic acid probe for fluorescence and synchrotron radiation X-ray dual-modality imaging
This study developed a novel Click-SNAs dual-mode probe based on click chemistry, which achieved high specificity fluorescence and synchrotron X-ray microscopy imaging of neuronal cells.
- Open Access
Strategies for Suppression and Compensation of Signal Loss in Ptychography
X-ray ptychography is an ultrahigh resolution imaging technique widely used in synchrotron radiation facilities. Its imaging performance relies on the quality of the acquired signals. However, the X-ray detectors used often suffer from signal loss due to sensor gaps, beamstops, defective pixels, overexposure, or other factors, resulting in degraded image quality. To suppress and compensate for the effects of signal loss, we proposed the known probe approach to partially recover the lost signals and introduced the high probe divergence strategy by investigating the effects of probe divergence on reconstruction quality under signal loss conditions. Both simulation and experiment results show that high probe divergence can effectively suppress the impact of signal loss on reconstruction quality while using a known probe as the initial probe for reconstruction can largely recover missing signals in Fourier space, resulting in a much better image than using a guessed initial probe. These strategies allow for high-quality imaging in the presence of signal loss without secondary data acquisition, significantly improving experimental efficiency and reducing radiation damage compared to previous strategies.
Open AccessStrategies for Suppression and Compensation of Signal Loss in Ptychography
X-ray ptychography is an ultrahigh resolution imaging technique widely used in synchrotron radiation facilities. Its imaging performance relies on the quality of the acquired signals. However, the X-ray detectors used often suffer from signal loss due to sensor gaps, beamstops, defective pixels, overexposure, or other factors, resulting in degraded image quality. To suppress and compensate for the effects of signal loss, we proposed the known probe approach to partially recover the lost signals and introduced the high probe divergence strategy by investigating the effects of probe divergence on reconstruction quality under signal loss conditions. Both simulation and experiment results show that high probe divergence can effectively suppress the impact of signal loss on reconstruction quality while using a known probe as the initial probe for reconstruction can largely recover missing signals in Fourier space, resulting in a much better image than using a guessed initial probe. These strategies allow for high-quality imaging in the presence of signal loss without secondary data acquisition, significantly improving experimental efficiency and reducing radiation damage compared to previous strategies.
- 5 June 2025
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Nuclear Science
- Vol. 72 (7) , 2194-2205
A Denoising Method for X-Ray Ptychography Combining a Physical Diffraction Model With a Deep Image Prior Network
X-ray ptychography is a lensless imaging technology with promising applications that can achieve nanometer resolution. However, the noise in the diffraction patterns degrades the performance of the phase recovery algorithms for ptychography. In reconstructed objects, the artifacts can affect details. We categorize the noise in the diffraction patterns into static intensity (SI) and dynamic random noise (DRN), which lead to periodic artifacts (PAs) and random noise in the reconstructed object. A denoising method for X-ray ptychography is therefore proposed to suppress the SI and DRN by a unified mathematical model. An explicit noise constraint based on the physical diffraction model and an implicit prior regarding the object for network extraction are integrated to construct a joint noise constraint. Simulations and soft X-ray experiments demonstrate the advanced capability of the proposed method for noise suppression. Compared with other methods (extended ptychographical iterative engine and periodic-artifact suppressing algorithm), the proposed method has high robustness and generality.
- 5 June 2025
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Nuclear Science
- Vol. 72 (7) , 2194-2205
A Denoising Method for X-Ray Ptychography Combining a Physical Diffraction Model With a Deep Image Prior Network
X-ray ptychography is a lensless imaging technology with promising applications that can achieve nanometer resolution. However, the noise in the diffraction patterns degrades the performance of the phase recovery algorithms for ptychography. In reconstructed objects, the artifacts can affect details. We categorize the noise in the diffraction patterns into static intensity (SI) and dynamic random noise (DRN), which lead to periodic artifacts (PAs) and random noise in the reconstructed object. A denoising method for X-ray ptychography is therefore proposed to suppress the SI and DRN by a unified mathematical model. An explicit noise constraint based on the physical diffraction model and an implicit prior regarding the object for network extraction are integrated to construct a joint noise constraint. Simulations and soft X-ray experiments demonstrate the advanced capability of the proposed method for noise suppression. Compared with other methods (extended ptychographical iterative engine and periodic-artifact suppressing algorithm), the proposed method has high robustness and generality.
- Open Access
Dynamic Coherent Diffractive Imaging with Modulus Enforced Probe and Low Spatial Frequency Constraints
Dynamic behavior is prevalent in biological and condensed matter systems at the nano- and mesoscopic scales. Typically, we capture images as “snapshots” to demonstrate the evolution of a system, and coherent X-ray diffraction imaging (CDI), as a lensless imaging technique, provides a nanoscale resolution, allowing us to clearly observe these microscopic phenomena. This paper presents a new dynamic CDI method based on zone-plate optics aiming to overcome the limitations of existing techniques in imaging fast dynamic processes by integrating the spatio-temporal dual constraint with a probe constraint. In this method, the modulus-enforced probe constraint and the temporal correlation of the dynamic sample low-frequency information are exploited and combined with an empty static region constraint in the dynamic sample. Using this method, we achieved a temporal resolution of 20 Hz and a spatial resolution of 13.2 nm, which were verified by visualized experimental results. Further comparisons showed that the reconstructed images were consistent with the ptychography reconstruction results, confirming the accuracy and feasibility of the method. This work is expected to provide a new tool for materials science and mesoscopic life sciences, promoting a deeper understanding of complex dynamic processes.
Open AccessDynamic Coherent Diffractive Imaging with Modulus Enforced Probe and Low Spatial Frequency Constraints
Dynamic behavior is prevalent in biological and condensed matter systems at the nano- and mesoscopic scales. Typically, we capture images as “snapshots” to demonstrate the evolution of a system, and coherent X-ray diffraction imaging (CDI), as a lensless imaging technique, provides a nanoscale resolution, allowing us to clearly observe these microscopic phenomena. This paper presents a new dynamic CDI method based on zone-plate optics aiming to overcome the limitations of existing techniques in imaging fast dynamic processes by integrating the spatio-temporal dual constraint with a probe constraint. In this method, the modulus-enforced probe constraint and the temporal correlation of the dynamic sample low-frequency information are exploited and combined with an empty static region constraint in the dynamic sample. Using this method, we achieved a temporal resolution of 20 Hz and a spatial resolution of 13.2 nm, which were verified by visualized experimental results. Further comparisons showed that the reconstructed images were consistent with the ptychography reconstruction results, confirming the accuracy and feasibility of the method. This work is expected to provide a new tool for materials science and mesoscopic life sciences, promoting a deeper understanding of complex dynamic processes.