Frédéric Saudou
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Research Interests
Frédéric Saudou has a total of 636 co-authors. Here are the top co-authors by number of shared publications:
- Sandrine Humbert
Sorbonne University, Institut du Cerveau - Paris Brain Institute - ICM, Inserm, CNRS, Paris, France
44 shared publications - Diana Zala
Université Paris Cité, Institute of Psychiatry and Neuroscience of Paris (IPNP), INSERM U1266, Dynamics of Neuronal Structure in Health and Disease, Paris, France
15 shared publications - Alexis Brice
Sorbonne Université, Institut du Cerveau - Paris Brain Institute - ICM, Institut National de la Recherche Médicale-U1127, Centre National de la Recherche Scientifique-UMR7225, APHP, Paris, France
8 shared publications - Chiara Scaramuzzino
Univ. Grenoble Alpes, Inserm, U1216, CHU Grenoble Alpes, Grenoble Institut Neuroscience
7 shared publications Julie Bruyère
Univ. Grenoble Alpes, Inserm, U1216, CHU Grenoble Alpes, Grenoble Institut Neuroscience
7 shared publications- Laurent Nguyen
Laboratory of Molecular Regulation of Neurogenesis, GIGA Institute, University of Liège, Liège 4000, Belgium
7 shared publications
Latest Publications
- Open Access
- 27 October 2026
- Published by Elsevier in Molecular Therapy Nucleic Acids
- Vol. 37 (4)
Allele-selective and pan-allelic huntingtin lowering differentially affect neuronal homeostasis and BDNF transport
- 27 October 2026
- Published by Elsevier in Molecular Therapy Nucleic Acids
- Vol. 37 (4)
Open AccessAllele-selective and pan-allelic huntingtin lowering differentially affect neuronal homeostasis and BDNF transport
- 24 August 2026
- Published by SAGE Publications in Journal of Huntington's Disease
Huntingtin, signaling endosomes and neuronal survival in health and Huntington disease
The axonal transport of organelles mediates several functions throughout the lifespan of neurons. Over the past years, the role of endosomes, a specific type of trafficking organelle, has been extensively investigated for their increasing relevance during development, maturation and maintenance of neuronal networks. Endosome formation results from membrane invagination events driven by endocytic pathways. Following their formation, endosomes undergo maturation steps, and their fate is determined by the recruitment of specific cytosolic proteins to their membrane. Early endosomes may be recycled, signal in the distal compartments (signaling endosomes) or undergo fusion with autophagosomes (amphisomes), thus entering the degradation pathways together with lysosomes. Altogether, these processes regulate plasma membrane equilibrium at the synapse, further recycling and degradation of dysfunctional or toxic proteins, and promote the distribution of fundamental signals far from the synapses. Many of these pathways involve huntingtin (HTT) functions and are impaired in Huntington disease (HD). The past years have shed light on newly identified mechanisms involving the endocytic machinery with special attention being paid to long-range signaling endosome trafficking in axons. In this review, we will summarize the recent advancements and discuss the potential implications of therapeutic approaches to rescue these processes in the context of HD.
- 24 August 2026
- Published by SAGE Publications in Journal of Huntington's Disease
Huntingtin, signaling endosomes and neuronal survival in health and Huntington disease
The axonal transport of organelles mediates several functions throughout the lifespan of neurons. Over the past years, the role of endosomes, a specific type of trafficking organelle, has been extensively investigated for their increasing relevance during development, maturation and maintenance of neuronal networks. Endosome formation results from membrane invagination events driven by endocytic pathways. Following their formation, endosomes undergo maturation steps, and their fate is determined by the recruitment of specific cytosolic proteins to their membrane. Early endosomes may be recycled, signal in the distal compartments (signaling endosomes) or undergo fusion with autophagosomes (amphisomes), thus entering the degradation pathways together with lysosomes. Altogether, these processes regulate plasma membrane equilibrium at the synapse, further recycling and degradation of dysfunctional or toxic proteins, and promote the distribution of fundamental signals far from the synapses. Many of these pathways involve huntingtin (HTT) functions and are impaired in Huntington disease (HD). The past years have shed light on newly identified mechanisms involving the endocytic machinery with special attention being paid to long-range signaling endosome trafficking in axons. In this review, we will summarize the recent advancements and discuss the potential implications of therapeutic approaches to rescue these processes in the context of HD.
- 6 February 2026
- Published by American Chemical Society (ACS) in ACS Sensors
- Vol. 11 (2) , 1020-1032
Nanoscale Activity Mapping of Chloride-Permeable Pentameric Receptors
Pentameric glycine receptors (GlyRs) are key modulators of inhibitory neurotransmission, yet visualization of their activity across neuronal compartments has remained a challenge. Current methods that employ intracellularly tagged genetically encoded fluorescent proteins are prone to artefacts, as the tags can disrupt protein interactions that regulate receptor trafficking and positioning within the cell. We developed a novel, genetically encoded GlyRα2 activity reporter by fusing a chloride-sensitive fluorescent protein, mClYFP, to the extracellular N-terminus of GlyRα2. This chimeric receptor allows real-time nanoscopic visualization of the receptor and glycine-induced chloride concentration changes using total internal reflection fluorescence microscopy and ratio image analysis. Simultaneous electrophysiological and fluorescence measurements validated the functionality of both the ion channel and mClYFP components of our GlyRα2 activity reporter. The GlyRα2 ion channel characteristics are preserved, and the extracellular mClYFP tag reports chloride concentration changes in the physiological range. Therefore, mClYFP-GlyRα2 allowed us to detect receptor activity of chloride-permeable ionotropic receptors. In addition, we demonstrate that mClYFP-GlyRα2 can be effectively expressed in physiologically relevant striatal neurons. We present an extracellularly located, receptor-specific sensor that enables surface-accessible tracking of chloride ion dynamics in live cells. Our approach enables spatially resolved, non-invasive monitoring of chloride permeable receptor signaling, offering a powerful tool to investigate pentameric receptor function at the nanoscale.
- 6 February 2026
- Published by American Chemical Society (ACS) in ACS Sensors
- Vol. 11 (2) , 1020-1032
Nanoscale Activity Mapping of Chloride-Permeable Pentameric Receptors
Pentameric glycine receptors (GlyRs) are key modulators of inhibitory neurotransmission, yet visualization of their activity across neuronal compartments has remained a challenge. Current methods that employ intracellularly tagged genetically encoded fluorescent proteins are prone to artefacts, as the tags can disrupt protein interactions that regulate receptor trafficking and positioning within the cell. We developed a novel, genetically encoded GlyRα2 activity reporter by fusing a chloride-sensitive fluorescent protein, mClYFP, to the extracellular N-terminus of GlyRα2. This chimeric receptor allows real-time nanoscopic visualization of the receptor and glycine-induced chloride concentration changes using total internal reflection fluorescence microscopy and ratio image analysis. Simultaneous electrophysiological and fluorescence measurements validated the functionality of both the ion channel and mClYFP components of our GlyRα2 activity reporter. The GlyRα2 ion channel characteristics are preserved, and the extracellular mClYFP tag reports chloride concentration changes in the physiological range. Therefore, mClYFP-GlyRα2 allowed us to detect receptor activity of chloride-permeable ionotropic receptors. In addition, we demonstrate that mClYFP-GlyRα2 can be effectively expressed in physiologically relevant striatal neurons. We present an extracellularly located, receptor-specific sensor that enables surface-accessible tracking of chloride ion dynamics in live cells. Our approach enables spatially resolved, non-invasive monitoring of chloride permeable receptor signaling, offering a powerful tool to investigate pentameric receptor function at the nanoscale.
- Open Access
Early alterations of motor learning and corticostriatal network activity in a Huntington’s disease mouse model
Huntington’s disease (HD) is a neurodegenerative disorder that presents motor, cognitive and psychiatric symptoms as it progresses. Prior to motor symptoms onset, alterations and dysfunctions in the corticostriatal projections have been described along with cognitive deficits, but the sequence of early defects of brain circuits is largely unknown. There is thus a crucial need to identify early alterations that precede symptoms and that could be used as potential early disease markers. Using an HD knock-In mouse model (Hdh CAG140/+ ) that recapitulates the human genetic alterations and that show a late and progressive appearance of anatomical and behavior deficits, we identified early alterations in the motor learning abilities of young mice, long before any motor coordination defects. In parallel, e x vivo two-photon calcium recordings revealed that young HD mice have altered basal activity patterns in both dorsomedial and dorsolateral parts of the striatum. In addition, while wild-type mice display specific reorganization of the activity upon motor training, network alterations present in the basal state of non-trained mice are not affected by motor training of HD mice. Our results thus identify early behavioral deficits and network alterations that could serve as early markers of the disease.
Open AccessEarly alterations of motor learning and corticostriatal network activity in a Huntington’s disease mouse model
Huntington’s disease (HD) is a neurodegenerative disorder that presents motor, cognitive and psychiatric symptoms as it progresses. Prior to motor symptoms onset, alterations and dysfunctions in the corticostriatal projections have been described along with cognitive deficits, but the sequence of early defects of brain circuits is largely unknown. There is thus a crucial need to identify early alterations that precede symptoms and that could be used as potential early disease markers. Using an HD knock-In mouse model (Hdh CAG140/+ ) that recapitulates the human genetic alterations and that show a late and progressive appearance of anatomical and behavior deficits, we identified early alterations in the motor learning abilities of young mice, long before any motor coordination defects. In parallel, e x vivo two-photon calcium recordings revealed that young HD mice have altered basal activity patterns in both dorsomedial and dorsolateral parts of the striatum. In addition, while wild-type mice display specific reorganization of the activity upon motor training, network alterations present in the basal state of non-trained mice are not affected by motor training of HD mice. Our results thus identify early behavioral deficits and network alterations that could serve as early markers of the disease.
A vesicular Warburg effect: Aerobic glycolysis occurs on axonal vesicles for local NAD+ recycling and transport
In neurons, fast axonal transport (FAT) of vesicles occurs over long distances and requires constant and local energy supply for molecular motors in the form of adenosine triphosphate (ATP). FAT is independent of mitochondrial metabolism. Indeed, the glycolytic machinery is present on vesicles and locally produces ATP, as well as nicotinamide adenine dinucleotide bonded with hydrogen (NADH) and pyruvate, using glucose as a substrate. It remains unclear whether pyruvate is transferred to mitochondria from the vesicles as well as how NADH is recycled into NAD+ on vesicles for continuous glycolysis activity. The optimization of a glycolytic activity test for subcellular compartments allowed the evaluation of the kinetics of vesicular glycolysis in the brain. This revealed that glycolysis is more efficient on vesicles than in the cytosol. We also found that lactate dehydrogenase (LDH) enzymatic activity is required for effective vesicular ATP production. Indeed, inhibition of LDH or the forced degradation of pyruvate inhibited ATP production from axonal vesicles. We found LDHA rather than the B isoform to be enriched on axonal vesicles suggesting a preferential transformation of pyruvate to lactate and a concomitant recycling of NADH into NAD+ on vesicles. Finally, we found that LDHA inhibition dramatically reduces the FAT of both dense‐core vesicles and synaptic vesicle precursors in a reconstituted cortico‐striatal circuit on‐a‐chip. Together, this shows that aerobic glycolysis is required to supply energy for vesicular transport in neurons, similar to the Warburg effect.
A vesicular Warburg effect: Aerobic glycolysis occurs on axonal vesicles for local NAD+ recycling and transport
In neurons, fast axonal transport (FAT) of vesicles occurs over long distances and requires constant and local energy supply for molecular motors in the form of adenosine triphosphate (ATP). FAT is independent of mitochondrial metabolism. Indeed, the glycolytic machinery is present on vesicles and locally produces ATP, as well as nicotinamide adenine dinucleotide bonded with hydrogen (NADH) and pyruvate, using glucose as a substrate. It remains unclear whether pyruvate is transferred to mitochondria from the vesicles as well as how NADH is recycled into NAD+ on vesicles for continuous glycolysis activity. The optimization of a glycolytic activity test for subcellular compartments allowed the evaluation of the kinetics of vesicular glycolysis in the brain. This revealed that glycolysis is more efficient on vesicles than in the cytosol. We also found that lactate dehydrogenase (LDH) enzymatic activity is required for effective vesicular ATP production. Indeed, inhibition of LDH or the forced degradation of pyruvate inhibited ATP production from axonal vesicles. We found LDHA rather than the B isoform to be enriched on axonal vesicles suggesting a preferential transformation of pyruvate to lactate and a concomitant recycling of NADH into NAD+ on vesicles. Finally, we found that LDHA inhibition dramatically reduces the FAT of both dense‐core vesicles and synaptic vesicle precursors in a reconstituted cortico‐striatal circuit on‐a‐chip. Together, this shows that aerobic glycolysis is required to supply energy for vesicular transport in neurons, similar to the Warburg effect.
- Open Access
Customization of the translational complex regulates mRNA-specific translation to control CNS regeneration
- Open Access
- 11 July 2023
- Published by eLife Sciences Publications, Ltd in eLife
- Vol. 12
Huntingtin recruits KIF1A to transport synaptic vesicle precursors along the mouse axon to support synaptic transmission and motor skill learning
Neurotransmitters are released at synapses by synaptic vesicles (SVs), which originate from SV precursors (SVPs) that have traveled along the axon. Because each synapse maintains a pool of SVs, only a small fraction of which are released, it has been thought that axonal transport of SVPs does not affect synaptic function. Here, studying the corticostriatal network both in microfluidic devices and in mice, we find that phosphorylation of the Huntingtin protein (HTT) increases axonal transport of SVPs and synaptic glutamate release by recruiting the kinesin motor KIF1A. In mice, constitutive HTT phosphorylation causes SV over-accumulation at synapses, increases the probability of SV release, and impairs motor skill learning on the rotating rod. Silencing KIF1A in these mice restored SV transport and motor skill learning to wild-type levels. Axonal SVP transport within the corticostriatal network thus influences synaptic plasticity and motor skill learning.
- 11 July 2023
- Published by eLife Sciences Publications, Ltd in eLife
- Vol. 12
Open AccessHuntingtin recruits KIF1A to transport synaptic vesicle precursors along the mouse axon to support synaptic transmission and motor skill learning
Neurotransmitters are released at synapses by synaptic vesicles (SVs), which originate from SV precursors (SVPs) that have traveled along the axon. Because each synapse maintains a pool of SVs, only a small fraction of which are released, it has been thought that axonal transport of SVPs does not affect synaptic function. Here, studying the corticostriatal network both in microfluidic devices and in mice, we find that phosphorylation of the Huntingtin protein (HTT) increases axonal transport of SVPs and synaptic glutamate release by recruiting the kinesin motor KIF1A. In mice, constitutive HTT phosphorylation causes SV over-accumulation at synapses, increases the probability of SV release, and impairs motor skill learning on the rotating rod. Silencing KIF1A in these mice restored SV transport and motor skill learning to wild-type levels. Axonal SVP transport within the corticostriatal network thus influences synaptic plasticity and motor skill learning.
- Open Access
Stretch-injury promotes activation of microglia with enhanced phagocytic and synaptic stripping activities
Microglial cells must act as the first line of defense of the central nervous system, but they can be exposed to various mechanical signals that may trigger their activation. While the impact of chemical signaling on brain cells has been studied in detail, our current understanding of the mechanical signaling in microglia is still limited. To address this challenge, we exposed microglial cells to a single mechanical stretch and compared their behavior to chemical activation by lipopolysaccharide treatment. Here we show that stretching microglial cells results in their activation, demonstrating a strong mechanosensitivity. Stretched microglial cells exhibited higher Iba1 protein levels, a denser actin cytoskeleton and migrated more persistently. In contrary to LPS-treated cells, stretched microglia maintain a robust secretory profile of chemokines and cytokines, except for TNF-α, highlighting the relevance of this model. Interestingly, a single stretch injury results in more compacted chromatin and DNA damage, suggesting possible long-term genomic instabilities in stretched microglia. Using neuronal networks in compartmentalized microfluidic chambers, we found that stretched microglial cells exhibit enhanced phagocytic and synaptic stripping activities. Altogether, our results propose that the immune potential of microglial cells can be unlocked by stretching events to maintain brain tissue homeostasis after mechanical injury.
Open AccessStretch-injury promotes activation of microglia with enhanced phagocytic and synaptic stripping activities
Microglial cells must act as the first line of defense of the central nervous system, but they can be exposed to various mechanical signals that may trigger their activation. While the impact of chemical signaling on brain cells has been studied in detail, our current understanding of the mechanical signaling in microglia is still limited. To address this challenge, we exposed microglial cells to a single mechanical stretch and compared their behavior to chemical activation by lipopolysaccharide treatment. Here we show that stretching microglial cells results in their activation, demonstrating a strong mechanosensitivity. Stretched microglial cells exhibited higher Iba1 protein levels, a denser actin cytoskeleton and migrated more persistently. In contrary to LPS-treated cells, stretched microglia maintain a robust secretory profile of chemokines and cytokines, except for TNF-α, highlighting the relevance of this model. Interestingly, a single stretch injury results in more compacted chromatin and DNA damage, suggesting possible long-term genomic instabilities in stretched microglia. Using neuronal networks in compartmentalized microfluidic chambers, we found that stretched microglial cells exhibit enhanced phagocytic and synaptic stripping activities. Altogether, our results propose that the immune potential of microglial cells can be unlocked by stretching events to maintain brain tissue homeostasis after mechanical injury.
- Open Access
- 21 November 2022
- Published by Rockefeller University Press in Journal of General Physiology
- Vol. 155 (1)
Huntingtin regulates calcium fluxes in skeletal muscle
The expression of the Huntingtin protein, well known for its involvement in the neurodegenerative Huntington’s disease, has been confirmed in skeletal muscle. The impact of HTT deficiency was studied in human skeletal muscle cell lines and in a mouse model with inducible and muscle-specific HTT deletion. Characterization of calcium fluxes in the knock-out cell lines demonstrated a reduction in excitation–contraction (EC) coupling, related to an alteration in the coupling between the dihydropyridine receptor and the ryanodine receptor, and an increase in the amount of calcium stored within the sarcoplasmic reticulum, linked to the hyperactivity of store-operated calcium entry (SOCE). Immunoprecipitation experiments demonstrated an association of HTT with junctophilin 1 (JPH1) and stromal interaction molecule 1 (STIM1), both providing clues on the functional effects of HTT deletion on calcium fluxes. Characterization of muscle strength and muscle anatomy of the muscle-specific HTT-KO mice demonstrated that HTT deletion induced moderate muscle weakness and mild muscle atrophy associated with histological abnormalities, similar to the phenotype observed in tubular aggregate myopathy. Altogether, this study points toward the hypotheses of the involvement of HTT in EC coupling via its interaction with JPH1, and on SOCE via its interaction with JPH1 and/or STIM1.
- 21 November 2022
- Published by Rockefeller University Press in Journal of General Physiology
- Vol. 155 (1)
Open AccessHuntingtin regulates calcium fluxes in skeletal muscle
The expression of the Huntingtin protein, well known for its involvement in the neurodegenerative Huntington’s disease, has been confirmed in skeletal muscle. The impact of HTT deficiency was studied in human skeletal muscle cell lines and in a mouse model with inducible and muscle-specific HTT deletion. Characterization of calcium fluxes in the knock-out cell lines demonstrated a reduction in excitation–contraction (EC) coupling, related to an alteration in the coupling between the dihydropyridine receptor and the ryanodine receptor, and an increase in the amount of calcium stored within the sarcoplasmic reticulum, linked to the hyperactivity of store-operated calcium entry (SOCE). Immunoprecipitation experiments demonstrated an association of HTT with junctophilin 1 (JPH1) and stromal interaction molecule 1 (STIM1), both providing clues on the functional effects of HTT deletion on calcium fluxes. Characterization of muscle strength and muscle anatomy of the muscle-specific HTT-KO mice demonstrated that HTT deletion induced moderate muscle weakness and mild muscle atrophy associated with histological abnormalities, similar to the phenotype observed in tubular aggregate myopathy. Altogether, this study points toward the hypotheses of the involvement of HTT in EC coupling via its interaction with JPH1, and on SOCE via its interaction with JPH1 and/or STIM1.