Vladimiros Thoma
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
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Research Interests
Vladimiros Thoma has a total of 63 co-authors. Here are the top co-authors by number of shared publications:
Hiromu Tanimoto
Graduate School of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan
3 shared publications- Athinoula L. Petrou
Laboratory of Inorganic Chemistry, Department of Chemistry, University of Athens, Panepistimioupolis, 15771 Athens, Greece
2 shared publications Ayako Abe
Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan
2 shared publications- Carla Ferreri
ISOF, Consiglio Nazionale delle Ricerche, Bologna, Italy
2 shared publications - Hiromu Tanimoto
Tohoku University
2 shared publications - Koichi Hashimoto
Graduate School of Information Sciences, Tohoku University, Sendai, Japan
2 shared publications
Latest Publications
- Open Access
- 3 April 2023
- Published by National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 120 (15)
On the origin of appetite: GLWamide in jellyfish represents an ancestral satiety neuropeptide
Food intake is regulated by internal state. This function is mediated by hormones and neuropeptides, which are best characterized in popular model species. However, the evolutionary origins of such feeding-regulating neuropeptides are poorly understood. We used the jellyfishCladonemato address this question. Our combined transcriptomic, behavioral, and anatomical approaches identified GLWamide as a feeding-suppressing peptide that selectively inhibits tentacle contraction in this jellyfish. In the fruit flyDrosophila, myoinhibitory peptide (MIP) is a related satiety peptide. Surprisingly, we found that GLWamide and MIP were fully interchangeable in these evolutionarily distant species for feeding suppression. Our results suggest that the satiety signaling systems of diverse animals share an ancient origin.
- 3 April 2023
- Published by National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 120 (15)
Open AccessOn the origin of appetite: GLWamide in jellyfish represents an ancestral satiety neuropeptide
Food intake is regulated by internal state. This function is mediated by hormones and neuropeptides, which are best characterized in popular model species. However, the evolutionary origins of such feeding-regulating neuropeptides are poorly understood. We used the jellyfishCladonemato address this question. Our combined transcriptomic, behavioral, and anatomical approaches identified GLWamide as a feeding-suppressing peptide that selectively inhibits tentacle contraction in this jellyfish. In the fruit flyDrosophila, myoinhibitory peptide (MIP) is a related satiety peptide. Surprisingly, we found that GLWamide and MIP were fully interchangeable in these evolutionarily distant species for feeding suppression. Our results suggest that the satiety signaling systems of diverse animals share an ancient origin.
- Open Access
- 6 November 2017
- Published by Society for Neuroscience in eneuro
- Vol. 4 (6)
The Role of the Gustatory System in the Coordination of Feeding
To survive, all animals must find, inspect, and ingest food. Behavioral coordination and control of feeding is therefore a challenge that animals must face. Here, we focus on how the gustatory system guides the precise execution of behavioral sequences that promote ingestion and suppresses competing behaviors. We summarize principles learnt fromDrosophila, where underlying sensory neuronal mechanisms are illustrated in great detail. Moreover, we compare these principles with findings in other animals, where such coordination plays prominent roles. These examples suggest that the use of gustatory information for feeding coordination has an ancient origin and is prevalent throughout the animal kingdom.
- 6 November 2017
- Published by Society for Neuroscience in eneuro
- Vol. 4 (6)
Open AccessThe Role of the Gustatory System in the Coordination of Feeding
To survive, all animals must find, inspect, and ingest food. Behavioral coordination and control of feeding is therefore a challenge that animals must face. Here, we focus on how the gustatory system guides the precise execution of behavioral sequences that promote ingestion and suppresses competing behaviors. We summarize principles learnt fromDrosophila, where underlying sensory neuronal mechanisms are illustrated in great detail. Moreover, we compare these principles with findings in other animals, where such coordination plays prominent roles. These examples suggest that the use of gustatory information for feeding coordination has an ancient origin and is prevalent throughout the animal kingdom.
- Open Access
Multiple Drosophila Tracking System with Heading Direction
Machine vision systems have been widely used for image analysis, especially that which is beyond human ability. In biology, studies of behavior help scientists to understand the relationship between sensory stimuli and animal responses. This typically requires the analysis and quantification of animal locomotion. In our work, we focus on the analysis of the locomotion of the fruit fly , a widely used model organism in biological research. Our system consists of two components: fly detection and tracking. Our system provides the ability to extract a group of flies as the objects of concern and furthermore determines the heading direction of each fly. As each fly moves, the system states are refined with a Kalman filter to obtain the optimal estimation. For the tracking step, combining information such as position and heading direction with assignment algorithms gives a successful tracking result. The use of heading direction increases the system efficiency when dealing with identity loss and flies swapping situations. The system can also operate with a variety of videos with different light intensities.Open AccessMultiple Drosophila Tracking System with Heading Direction
Machine vision systems have been widely used for image analysis, especially that which is beyond human ability. In biology, studies of behavior help scientists to understand the relationship between sensory stimuli and animal responses. This typically requires the analysis and quantification of animal locomotion. In our work, we focus on the analysis of the locomotion of the fruit fly , a widely used model organism in biological research. Our system consists of two components: fly detection and tracking. Our system provides the ability to extract a group of flies as the objects of concern and furthermore determines the heading direction of each fly. As each fly moves, the system states are refined with a Kalman filter to obtain the optimal estimation. For the tracking step, combining information such as position and heading direction with assignment algorithms gives a successful tracking result. The use of heading direction increases the system efficiency when dealing with identity loss and flies swapping situations. The system can also operate with a variety of videos with different light intensities. - Open Access
- 19 February 2016
- Published by Springer Nature in Nature Communications
- Vol. 7 (1) , 10678
Functional dissociation in sweet taste receptor neurons between and within taste organs of Drosophila
Finding food sources is essential for survival. Insects detect nutrients with external taste receptor neurons. Drosophila possesses multiple taste organs that are distributed throughout its body. However, the role of different taste organs in feeding remains poorly understood. By blocking subsets of sweet taste receptor neurons, we show that receptor neurons in the legs are required for immediate sugar choice. Furthermore, we identify two anatomically distinct classes of sweet taste receptor neurons in the leg. The axonal projections of one class terminate in the thoracic ganglia, whereas the other projects directly to the brain. These two classes are functionally distinct: the brain-projecting neurons are involved in feeding initiation, whereas the thoracic ganglia-projecting neurons play a role in sugar-dependent suppression of locomotion. Distinct receptor neurons for the same taste quality may coordinate early appetitive responses, taking advantage of the legs as the first appendages to contact food.
- 19 February 2016
- Published by Springer Nature in Nature Communications
- Vol. 7 (1) , 10678
Open AccessFunctional dissociation in sweet taste receptor neurons between and within taste organs of Drosophila
Finding food sources is essential for survival. Insects detect nutrients with external taste receptor neurons. Drosophila possesses multiple taste organs that are distributed throughout its body. However, the role of different taste organs in feeding remains poorly understood. By blocking subsets of sweet taste receptor neurons, we show that receptor neurons in the legs are required for immediate sugar choice. Furthermore, we identify two anatomically distinct classes of sweet taste receptor neurons in the leg. The axonal projections of one class terminate in the thoracic ganglia, whereas the other projects directly to the brain. These two classes are functionally distinct: the brain-projecting neurons are involved in feeding initiation, whereas the thoracic ganglia-projecting neurons play a role in sugar-dependent suppression of locomotion. Distinct receptor neurons for the same taste quality may coordinate early appetitive responses, taking advantage of the legs as the first appendages to contact food.
- 30 September 2012
- Published by Elsevier in Biochimica et Biophysica Acta (BBA) - Biomembranes
- Vol. 1818 (9) , 2314-2324
trans Arachidonic acid isomers inhibit NADPH-oxidase activity by direct interaction with enzyme components
- 30 September 2012
- Published by Elsevier in Biochimica et Biophysica Acta (BBA) - Biomembranes
- Vol. 1818 (9) , 2314-2324
trans Arachidonic acid isomers inhibit NADPH-oxidase activity by direct interaction with enzyme components
- 1 May 2012
- Published by Elsevier in Journal of Proteomics
- Vol. 75 (9) , 2685-2696
Identification of a potential biomarker panel for the intake of the common dietary trans fat elaidic acid (trans∆9-C18:1)
- 1 May 2012
- Published by Elsevier in Journal of Proteomics
- Vol. 75 (9) , 2685-2696
Identification of a potential biomarker panel for the intake of the common dietary trans fat elaidic acid (trans∆9-C18:1)
- Top Cited Papers
- 19 June 2011
- Published by Springer Nature in Nature Neuroscience
- Vol. 14 (7) , 903-910
Mushroom body efferent neurons responsible for aversive olfactory memory retrieval in Drosophila
Aversive olfactory memory is formed in the mushroom bodies in Drosophila melanogaster. Memory retrieval requires mushroom body output, but the manner in which a memory trace in the mushroom body drives conditioned avoidance of a learned odor remains unknown. To identify neurons that are involved in olfactory memory retrieval, we performed an anatomical and functional screen of defined sets of mushroom body output neurons. We found that MB-V2 neurons were essential for retrieval of both short- and long-lasting memory, but not for memory formation or memory consolidation. MB-V2 neurons are cholinergic efferent neurons that project from the mushroom body vertical lobes to the middle superiormedial protocerebrum and the lateral horn. Notably, the odor response of MB-V2 neurons was modified after conditioning. As the lateral horn has been implicated in innate responses to repellent odorants, we propose that MB-V2 neurons recruit the olfactory pathway involved in innate odor avoidance during memory retrieval.
- 19 June 2011
- Published by Springer Nature in Nature Neuroscience
- Vol. 14 (7) , 903-910
Top Cited PapersMushroom body efferent neurons responsible for aversive olfactory memory retrieval in Drosophila
Aversive olfactory memory is formed in the mushroom bodies in Drosophila melanogaster. Memory retrieval requires mushroom body output, but the manner in which a memory trace in the mushroom body drives conditioned avoidance of a learned odor remains unknown. To identify neurons that are involved in olfactory memory retrieval, we performed an anatomical and functional screen of defined sets of mushroom body output neurons. We found that MB-V2 neurons were essential for retrieval of both short- and long-lasting memory, but not for memory formation or memory consolidation. MB-V2 neurons are cholinergic efferent neurons that project from the mushroom body vertical lobes to the middle superiormedial protocerebrum and the lateral horn. Notably, the odor response of MB-V2 neurons was modified after conditioning. As the lateral horn has been implicated in innate responses to repellent odorants, we propose that MB-V2 neurons recruit the olfactory pathway involved in innate odor avoidance during memory retrieval.
- Open Access
- 1 January 2010
- Published by Wiley in Bioinorganic Chemistry and Applications
- Vol. 2010 (1) , 348692
Kinetics and Mechanism of the Reaction between Chromium(III) and 2,3‐Dihydroxybenzoic Acid in Weak Acidic Aqueous Solutions
The reaction between chromium(III) and 2,3‐dihydroxybenzoic acid (2,3‐DHBA) takes place in at least three stages, involving various intermediates. The ligand (2,3‐DHBA)‐to‐chromium(III) ratio in the final product of the reaction is 1 : 1. The first stage is suggested to be the reaction of with the ligand in weak acidic aqueous solutions that follows an Id mechanism. The second and third stages do not depend on the concentrations of chromium(III), and their activation parameters are ΔH≠ 2(obs) = 61.2 ± 3.1 kJmol−1, ΔS≠ 2(obs) = −91.1 ± 11.0 JK−1mol−1, ΔH≠ 3(obs) = 124.5 ± 8.7 kJmol−1, and ΔS≠ 3(obs) = 95.1 ± 29.0 JK−1mol−1. These two stages are proposed to proceed via associative mechanisms. The positive value of ΔS≠ 3(obs) can be explained by the opening of a four‐membered ring (positive entropy change) and the breaking of a hydrogen bond (positive entropy change) at the associative step of the replacement of the carboxyl group by the hydroxyl group at the chromium(III) center (negative entropy change in associative mechanisms). The reactions are accompanied by proton release, as shown by the pH decrease.
- 1 January 2010
- Published by Wiley in Bioinorganic Chemistry and Applications
- Vol. 2010 (1) , 348692
Open AccessKinetics and Mechanism of the Reaction between Chromium(III) and 2,3‐Dihydroxybenzoic Acid in Weak Acidic Aqueous Solutions
The reaction between chromium(III) and 2,3‐dihydroxybenzoic acid (2,3‐DHBA) takes place in at least three stages, involving various intermediates. The ligand (2,3‐DHBA)‐to‐chromium(III) ratio in the final product of the reaction is 1 : 1. The first stage is suggested to be the reaction of with the ligand in weak acidic aqueous solutions that follows an Id mechanism. The second and third stages do not depend on the concentrations of chromium(III), and their activation parameters are ΔH≠ 2(obs) = 61.2 ± 3.1 kJmol−1, ΔS≠ 2(obs) = −91.1 ± 11.0 JK−1mol−1, ΔH≠ 3(obs) = 124.5 ± 8.7 kJmol−1, and ΔS≠ 3(obs) = 95.1 ± 29.0 JK−1mol−1. These two stages are proposed to proceed via associative mechanisms. The positive value of ΔS≠ 3(obs) can be explained by the opening of a four‐membered ring (positive entropy change) and the breaking of a hydrogen bond (positive entropy change) at the associative step of the replacement of the carboxyl group by the hydroxyl group at the chromium(III) center (negative entropy change in associative mechanisms). The reactions are accompanied by proton release, as shown by the pH decrease.
- 17 March 2009
- Published by Springer Nature in JBIC Journal of Biological Inorganic Chemistry
- Vol. 14 (5) , 783-799
Insight into the protein and solvent contributions to the reduction potentials of [4Fe–4S]2+/+ clusters: crystal structures of the Allochromatium vinosum ferredoxin variants C57A and V13G and the homologous Escherichia coli ferredoxin
The crystal structures of the C57A and V13G molecular variants of Allochromatium vinosum 2[4Fe–4S] ferredoxin (AlvinFd) and that of the homologous ferredoxin from Escherichia coli (EcFd) have been determined at 1.05-, 1.48-, and 1.65-Å resolution, respectively. The present structures combined with cyclic voltammetry studies establish clear effects of the degree of exposure of the cluster with the lowest reduction potential (cluster I) towards less negative reduction potentials (E°). This is better illustrated by V13G AlvinFd (high exposure, E° = −594 mV) and EcFd (low exposure, E° = −675 mV). In C57A AlvinFd, the movement of the protein backbone, as a result of replacing the noncoordinating Cys57 by Ala, leads to a +50-mV upshift of the potential of the nearby cluster I, by removal of polar interactions involving the thiolate group and adjustment of the hydrogen-bond network involving the cluster atoms. In addition, the present structures and other previously reported accurate structures of this family of ferredoxins indicate that polar interactions of side chains and water molecules with cluster II sulfur atoms, which are absent in the environment of cluster I, are correlated to the approximately 180–250 mV difference between the reduction potentials of clusters I and II. These findings provide insight into the significant effects of subtle structural differences of the protein and solvent environment around the clusters of [4Fe–4S] ferredoxins on their electrochemical properties.
- 17 March 2009
- Published by Springer Nature in JBIC Journal of Biological Inorganic Chemistry
- Vol. 14 (5) , 783-799
Insight into the protein and solvent contributions to the reduction potentials of [4Fe–4S]2+/+ clusters: crystal structures of the Allochromatium vinosum ferredoxin variants C57A and V13G and the homologous Escherichia coli ferredoxin
The crystal structures of the C57A and V13G molecular variants of Allochromatium vinosum 2[4Fe–4S] ferredoxin (AlvinFd) and that of the homologous ferredoxin from Escherichia coli (EcFd) have been determined at 1.05-, 1.48-, and 1.65-Å resolution, respectively. The present structures combined with cyclic voltammetry studies establish clear effects of the degree of exposure of the cluster with the lowest reduction potential (cluster I) towards less negative reduction potentials (E°). This is better illustrated by V13G AlvinFd (high exposure, E° = −594 mV) and EcFd (low exposure, E° = −675 mV). In C57A AlvinFd, the movement of the protein backbone, as a result of replacing the noncoordinating Cys57 by Ala, leads to a +50-mV upshift of the potential of the nearby cluster I, by removal of polar interactions involving the thiolate group and adjustment of the hydrogen-bond network involving the cluster atoms. In addition, the present structures and other previously reported accurate structures of this family of ferredoxins indicate that polar interactions of side chains and water molecules with cluster II sulfur atoms, which are absent in the environment of cluster I, are correlated to the approximately 180–250 mV difference between the reduction potentials of clusters I and II. These findings provide insight into the significant effects of subtle structural differences of the protein and solvent environment around the clusters of [4Fe–4S] ferredoxins on their electrochemical properties.