Huanming Xu
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Huanming Xu has a total of 38 co-authors. Here are the top co-authors by number of shared publications:
- Jiang Xiong
Department of Vascular and Endovascular Surgery, Chinese PLA General Hospital, Beijing, China
5 shared publications - Duanduan Chen
School of Medical Technology, Beijing Institute of Technology, Beijing, China
4 shared publications Jianyong Wei
School of Life Science, Beijing Institute of Technology, Beijing, China
3 shared publicationsXiaofeng Han
Department of Diagnostic and Interventional Radiology, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
3 shared publicationsDuanduan Chen
Department of Biomedical Engineering, School of Life Science, Beijing Institute of Technology, Beijing, People's Republic of China; Key Laboratory of Convergence Medical Engineering System and Healthcare Technology, The Ministry of Industry and Information Technology, Beijing Institute of Technology, Beijing, People's Republic of China
2 shared publications- Paul N. Watton
Department of Computer Science, University of Sheffield, Sheffield, UK
2 shared publications
Latest Publications
- Open Access
- 15 March 2024
- Published by Impact Journals, LLC in Aging
- Vol. 16 (6) , 5545-5566
A pyrimidine metabolism-related signature for prognostic and immunotherapeutic response prediction in hepatocellular carcinoma by integrating analyses
Background: Hepatocellular carcinoma (HCC), with discouraging morbidity and mortality, ranks as one of the most prevalent tumors worldwide. Pyrimidine metabolism is a critical process that regulates DNA and RNA synthesis in cells. It is imperative to investigate the significance of pyrimidine metabolism in liver cancer. Methods: Transcriptome and clinical data were downloaded from the TCGA database and the GEO database. The genes related to pyrimidine metabolism were sourced from the MSigDB. The pyrimidine metabolism-related signature (PMRS) was constructed through Cox regression and Lasso regression and then verified in the external validation set from the ICGC database. Functional enrichment, immune infiltration analysis, drug sensitivity, and Immunophenoscore (IPS) were further implemented to predict the response to immunotherapy. The role of PMRS in the malignant phenotype of hepatocellular carcinoma was explored by conducting a series of in vitro experiments. Results: Our study developed a four-genes PMRS which demonstrates a substantial correlation with the prognosis of HCC patients, serving as an independent predictor in clinical practice. The result of risk-stratified analysis yielded evidence that low-risk patients experienced more favorable clinical outcomes. The nomogram exhibited remarkable prognostic predictive value. The subsequent results revealed that low-risk patients manifested a more promising response to immunotherapy. Moreover, the results of cell experiments demonstrated that the downregulation of DCK markedly inhibited the malignant phenotype of hepatocellular carcinoma. Conclusions: Our pyrimidine metabolism-centered prognostic signature accurately predicts overall survival, immune status, and treatment response in hepatocellular carcinoma (HCC) patients, offering innovative insights for precise diagnosis, personalized treatment, and improved prognosis.
- 15 March 2024
- Published by Impact Journals, LLC in Aging
- Vol. 16 (6) , 5545-5566
Open AccessA pyrimidine metabolism-related signature for prognostic and immunotherapeutic response prediction in hepatocellular carcinoma by integrating analyses
Background: Hepatocellular carcinoma (HCC), with discouraging morbidity and mortality, ranks as one of the most prevalent tumors worldwide. Pyrimidine metabolism is a critical process that regulates DNA and RNA synthesis in cells. It is imperative to investigate the significance of pyrimidine metabolism in liver cancer. Methods: Transcriptome and clinical data were downloaded from the TCGA database and the GEO database. The genes related to pyrimidine metabolism were sourced from the MSigDB. The pyrimidine metabolism-related signature (PMRS) was constructed through Cox regression and Lasso regression and then verified in the external validation set from the ICGC database. Functional enrichment, immune infiltration analysis, drug sensitivity, and Immunophenoscore (IPS) were further implemented to predict the response to immunotherapy. The role of PMRS in the malignant phenotype of hepatocellular carcinoma was explored by conducting a series of in vitro experiments. Results: Our study developed a four-genes PMRS which demonstrates a substantial correlation with the prognosis of HCC patients, serving as an independent predictor in clinical practice. The result of risk-stratified analysis yielded evidence that low-risk patients experienced more favorable clinical outcomes. The nomogram exhibited remarkable prognostic predictive value. The subsequent results revealed that low-risk patients manifested a more promising response to immunotherapy. Moreover, the results of cell experiments demonstrated that the downregulation of DCK markedly inhibited the malignant phenotype of hepatocellular carcinoma. Conclusions: Our pyrimidine metabolism-centered prognostic signature accurately predicts overall survival, immune status, and treatment response in hepatocellular carcinoma (HCC) patients, offering innovative insights for precise diagnosis, personalized treatment, and improved prognosis.
- 1 August 2021
- Published by Elsevier in The Journal of Thoracic and Cardiovascular Surgery
- Vol. 162 (2) , e165-e176
Computed tomography-based hemodynamic index for aortic dissection
- 1 August 2021
- Published by Elsevier in The Journal of Thoracic and Cardiovascular Surgery
- Vol. 162 (2) , e165-e176
Computed tomography-based hemodynamic index for aortic dissection
- 1 December 2019
- Published by Elsevier in Clinical Radiology
- Vol. 74 (12) , 972.e17-972.e23
Type 2 diabetes mellitus is associated with increased left ventricular mass independent of coronary artery volume
- 1 December 2019
- Published by Elsevier in Clinical Radiology
- Vol. 74 (12) , 972.e17-972.e23
Type 2 diabetes mellitus is associated with increased left ventricular mass independent of coronary artery volume
- 5 March 2019
- Published by Wiley in International Journal for Numerical Methods in Biomedical Engineering
- Vol. 35 (6) , e3197
Optimization schemes for endovascular repair with parallel technique based on hemodynamic analyses
Endovascular repair with parallel stent‐grafts (SG) is a challenging technique that reconstructs the luminal flow pathways by implanting parallel‐placed SGs into the vessel. After treatment, occlusion and shifting of the parallel SGs are sometimes reported, which could be fatal and difficult to be re‐operated. These issues are highly related to the local hemodynamic conditions in the stented region. In this study, a patient case treated by the octopus endograft technique (a head‐SG with three limb‐SGs) and experienced limb‐SG occlusion is studied. 3‐D models are established based on computed tomography (CT) angiography datasets pretreatment and posttreatment as well as during follow‐ups. Hemodynamic quantities such as pressure drop, wall shear stress‐related parameters, and flow division in limb‐SGs and visceral arteries are quantitatively investigated. Optimizations on the length of the head‐SG and diameter of the limb‐SGs are analyzed based on various scenarios. The results indicate that when reconstructing the flow pathways via octopus stenting, it is important to ensure the flow distribution as physiologically required with this new morphology. Position (or length) of the head‐SG and diameter of the limb‐SGs play an important role in controlling flow division, and high time average wall shear stress (TAWSS) around the head‐SG acts as a main factor for graft immigration. This study, by proposing optimization suggestions with hemodynamic analyses for a specific case, implicates that pretreatment SG scenarios may assist in wise selection and placement of the device and thus may improve long‐term effectiveness of this kind of challenging endovascular repair techniques.
- 5 March 2019
- Published by Wiley in International Journal for Numerical Methods in Biomedical Engineering
- Vol. 35 (6) , e3197
Optimization schemes for endovascular repair with parallel technique based on hemodynamic analyses
Endovascular repair with parallel stent‐grafts (SG) is a challenging technique that reconstructs the luminal flow pathways by implanting parallel‐placed SGs into the vessel. After treatment, occlusion and shifting of the parallel SGs are sometimes reported, which could be fatal and difficult to be re‐operated. These issues are highly related to the local hemodynamic conditions in the stented region. In this study, a patient case treated by the octopus endograft technique (a head‐SG with three limb‐SGs) and experienced limb‐SG occlusion is studied. 3‐D models are established based on computed tomography (CT) angiography datasets pretreatment and posttreatment as well as during follow‐ups. Hemodynamic quantities such as pressure drop, wall shear stress‐related parameters, and flow division in limb‐SGs and visceral arteries are quantitatively investigated. Optimizations on the length of the head‐SG and diameter of the limb‐SGs are analyzed based on various scenarios. The results indicate that when reconstructing the flow pathways via octopus stenting, it is important to ensure the flow distribution as physiologically required with this new morphology. Position (or length) of the head‐SG and diameter of the limb‐SGs play an important role in controlling flow division, and high time average wall shear stress (TAWSS) around the head‐SG acts as a main factor for graft immigration. This study, by proposing optimization suggestions with hemodynamic analyses for a specific case, implicates that pretreatment SG scenarios may assist in wise selection and placement of the device and thus may improve long‐term effectiveness of this kind of challenging endovascular repair techniques.
- Open Access
- 1 January 2018
- Published by Ivyspring International Publisher in Theranostics
- Vol. 8 (20) , 5758-5771
Virtual stenting with simplex mesh and mechanical contact analysis for real-time planning of thoracic endovascular aortic repair
In aortic endovascular repair, the prediction of stented vessel remodeling informs treatment plans and risk evaluation; however, there are no highly accurate and efficient methods to quantitatively simulate stented vessels. This study developed a fast virtual stenting algorithm to simulate stent-induced aortic remodeling to assist in real-time thoracic endovascular aortic repair planning.
- 1 January 2018
- Published by Ivyspring International Publisher in Theranostics
- Vol. 8 (20) , 5758-5771
Open AccessVirtual stenting with simplex mesh and mechanical contact analysis for real-time planning of thoracic endovascular aortic repair
In aortic endovascular repair, the prediction of stented vessel remodeling informs treatment plans and risk evaluation; however, there are no highly accurate and efficient methods to quantitatively simulate stented vessels. This study developed a fast virtual stenting algorithm to simulate stent-induced aortic remodeling to assist in real-time thoracic endovascular aortic repair planning.
- 1 November 2017
- Published by Elsevier in Annals of Vascular Surgery
- Vol. 45, 117-126
The Significance of the Angle between Superior Mesenteric Artery and Aorta in Spontaneous Isolated Superior Mesenteric Artery Dissection
- 1 November 2017
- Published by Elsevier in Annals of Vascular Surgery
- Vol. 45, 117-126
The Significance of the Angle between Superior Mesenteric Artery and Aorta in Spontaneous Isolated Superior Mesenteric Artery Dissection
- Open Access
- 7 September 2017
- Published by IOP Publishing in Medical Engineering & Physics
- Vol. 50 (1) , 12-21
Hemodynamic parameters that may predict false-lumen growth in type-B aortic dissection after endovascular repair: A preliminary study on long-term multiple follow-ups
Thoracic endovascular aortic repair (TEVAR) is commonly applied in type-B aortic dissection. For patients with dissection affects descending aorta and extends downward to involve abdominal aorta and possibly iliac arteries, false lumen (FL) expansion might occur post-TEVAR. Predictions of dissection development may assist in medical decision on re-intervention or surgery. In this study, two patients are selected with similar morphological features at initial presentation but with different long-term FL development post-TEVAR (stable and enlarged FL). Patient-specific models are established for each of the follow-ups. Flow boundaries and computational validations are obtained from Doppler ultrasound velocimetry. By analyzing the hemodynamic parameters, the false-to-true luminal pressure difference (PDiff) and particle relative residence time (RRT) are found related to FL remodeling. It is found that (i) the position of the first FL flow entry is the watershed of negative-and-positive PDiff and, in long-term follow-ups, and the position of largest PDiff is consistent with that of the greatest increase of FL width; (ii) high RRT occurs at the FL proximal tip and similar magnitude of RRT is found in both stable and enlarged cases; (iii) comparing to the RRT at 7days post-TEVAR, an increase of RRT afterwards in short-term is found in the stable case while a slight decrease of this parameter is found in the enlarged case, indicating that the variation of RRT in short-term post-TEVAR might be potential to predict long-term FL remodeling.
- 7 September 2017
- Published by IOP Publishing in Medical Engineering & Physics
- Vol. 50 (1) , 12-21
Open AccessHemodynamic parameters that may predict false-lumen growth in type-B aortic dissection after endovascular repair: A preliminary study on long-term multiple follow-ups
Thoracic endovascular aortic repair (TEVAR) is commonly applied in type-B aortic dissection. For patients with dissection affects descending aorta and extends downward to involve abdominal aorta and possibly iliac arteries, false lumen (FL) expansion might occur post-TEVAR. Predictions of dissection development may assist in medical decision on re-intervention or surgery. In this study, two patients are selected with similar morphological features at initial presentation but with different long-term FL development post-TEVAR (stable and enlarged FL). Patient-specific models are established for each of the follow-ups. Flow boundaries and computational validations are obtained from Doppler ultrasound velocimetry. By analyzing the hemodynamic parameters, the false-to-true luminal pressure difference (PDiff) and particle relative residence time (RRT) are found related to FL remodeling. It is found that (i) the position of the first FL flow entry is the watershed of negative-and-positive PDiff and, in long-term follow-ups, and the position of largest PDiff is consistent with that of the greatest increase of FL width; (ii) high RRT occurs at the FL proximal tip and similar magnitude of RRT is found in both stable and enlarged cases; (iii) comparing to the RRT at 7days post-TEVAR, an increase of RRT afterwards in short-term is found in the stable case while a slight decrease of this parameter is found in the enlarged case, indicating that the variation of RRT in short-term post-TEVAR might be potential to predict long-term FL remodeling.
- Open Access
- 1 June 2017
- Published by Elsevier in Journal of Vascular Surgery Cases, Innovations and Techniques
- Vol. 3 (2) , 90-94
Successful use of retrograde branched extension limb assembling technique in endovascular repair of pararenal abdominal aortic aneurysm
- 1 June 2017
- Published by Elsevier in Journal of Vascular Surgery Cases, Innovations and Techniques
- Vol. 3 (2) , 90-94
Open AccessSuccessful use of retrograde branched extension limb assembling technique in endovascular repair of pararenal abdominal aortic aneurysm