JGJeremy A. Grajeda

Jeremy A. Grajeda

*This is an algorithmically generated author record based on publicly available information.

Current Organizations / Institutes

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Jeremy A. Grajeda has a total of 40 co-authors. Here are the top co-authors by number of shared publications:


Latest Publications

  • Open Access

    Incorporating Magnetic-Field Characteristics into EUV-Based Automated Segmentation of Coronal Holes

    by Jeremy A. Grajeda, Laura E. Boucheron, Michael S. Kirk, Andrew Leisner, Jaime A. Landeros, C. Nick Arge

    Coronal holes (CHs) are magnetically open regions that allow hot coronal plasma to escape from the Sun and form the high-speed solar wind. This wind can interact with Earth’s magnetic field. For this reason, developing an accurate understanding of CH regions is vital for understanding space weather and its effects on Earth. The process of identifying CH regions typically relies on extreme ultraviolet (EUV) imagery, leveraging the fact that CHs appear dark at these wavelengths. Accurate identification of CHs in EUV, however, can be difficult due to a variety of factors, including stray light from nearby regions, limb brightening, and the presence of filaments (which also appear dark, but are not sources of solar wind). In order to overcome these issues, this work incorporates photospheric magnetic-field data into a classical EUV-based segmentation algorithm based on the Active Contours Without Edges (ACWE) segmentation method. In this work magnetic-field data are incorporated directly into the segmentation process, serving both as a method for removing non-CH regions in advance, and as a method to constrain evolution of the segmented CH boundary. This reduces the presence of filaments while allowing the segmentation to include CH regions that may be difficult to identify due to inconsistent intensities.


  • Open Access

    Magnetic Field-Constrained Ensemble Image Segmentation of Coronal Holes in Chromospheric Observations

    by Jaime A. Landeros, Michael S. Kirk, C. Nick Arge, Laura E. Boucheron, Jie Zhang, Vadim M. Uritsky, Jeremy A. Grajeda, Matthew Dupertuis

    Coronal holes (CHs) are large-scale, low-density regions in the solar atmosphere that may expel high-speed solar wind streams that incite hazardous, geomagnetic storms. Coronal and solar wind models can predict these high-speed streams, and the performance of the coronal model can be validated against segmented CH boundaries. We present a novel method named Sub-Transition Region Identification of Ensemble Coronal Holes (STRIDE-CH) to address prominent challenges in segmenting CHs using extreme-ultraviolet (EUV) imagery. Ground-based, chromospheric He i 10,830 Å line imagery and underlying Fe i photospheric magnetograms are revisited to disambiguate CHs from filaments and quiet Sun, overcome obscuration by coronal loops, and complement established methods in the community which use space-borne coronal EUV observations. Classical computer vision techniques are applied to constrain the radiative and magnetic properties of detected CHs, produce an ensemble of boundaries, and compile these boundaries in a confidence map that quantifies the likelihood of the CH presence throughout the solar disk. This method is a science-enabling one towards future studies of CH formation and variability from a mid-atmospheric perspective.


  • Open Access

    A Community Data Set for Comparing Automated Coronal Hole Detection Schemes

    by Martin A. Reiss, Karin Muglach, Emily Mason, Emma E. Davies, Shibaji Chakraborty, Veronique Delouille, Cooper Downs, Tadhg M. Garton, Jeremy A. Grajeda, Amr Hamada, et al.

    Automated detection schemes are nowadays the standard approach for locating coronal holes in extreme-UV images from the Solar Dynamics Observatory (SDO). However, factors such as the noisy nature of solar imagery, instrumental effects, and others make it challenging to identify coronal holes using these automated schemes. While discrepancies between detection schemes have been noted in the literature, a comprehensive assessment of these discrepancies is still lacking. The contribution of the Coronal Hole Boundary Working Team in the COSPAR ISWAT initiative to close this gap is threefold. First, we present the first community data set for comparing automated coronal hole detection schemes. This data set consists of 29 SDO images, all of which were selected by experienced observers to challenge automated schemes. Second, we use this community data set as input to 14 widely applied automated schemes to study coronal holes and collect their detection results. Third, we study three SDO images from the data set that exemplify the most important lessons learned from this effort. Our findings show that the choice of the automated detection scheme can have a significant effect on the physical properties of coronal holes, and we discuss the implications of these findings for open questions in solar and heliospheric physics. We envision that this community data set will serve the scientific community as a benchmark data set for future developments in the field.


  • Open Access

    Solar active region magnetogram image dataset for studies of space weather

    by Laura E. Boucheron, Ty Vincent, Jeremy A. Grajeda, Ellery Wuest

    In this dataset we provide a comprehensive collection of line-of-sight (LOS) solar photospheric magnetograms (images quantifying the strength of the photospheric magnetic field) from the National Aeronautics and Space Administration’s (NASA’s) Solar Dynamics Observatory (SDO). The dataset incorporates data from three sources and provides SDO Helioseismic and Magnetic Imager (HMI) magnetograms of solar active regions (regions of large magnetic flux, generally the source of eruptive events) as well as labels of corresponding flaring activity. This dataset will be useful for image analysis or solar physics research related to magnetic structure, its evolution over time, and its relation to solar flares. The dataset will be of interest to those researchers investigating automated solar flare prediction methods, including supervised and unsupervised machine learning (classical and deep), binary and multi-class classification, and regression. This dataset is a minimally processed, user configurable dataset of consistently sized images of solar active regions that can serve as a comprehensive image dataset of LOS photospheric magnetograms for solar flare prediction research.


  • Open Access

    Quantifying the Consistency and Characterizing the Confidence of Coronal Holes Detected by Active Contours Without Edges (ACWE)

    by Jeremy A. Grajeda, Laura E. Boucheron, Michael S. Kirk, Andrew Leisner, C. Nick Arge

    Coronal Holes (CHs) are regions of open magnetic-field lines, resulting in high-speed solar wind. Accurate detection of CHs is vital for space-weather prediction. This paper presents an intramethod ensemble for coronal-hole detection based on the Active Contours Without Edges (ACWE) segmentation algorithm. The purpose of this ensemble is to develop a confidence map that defines, for all ondisk regions of a solar extreme ultraviolet (EUV) image, the likelihood that each region belongs to a CH based on that region’s proximity to, and homogeneity with, the core of identified CH regions. By relying on region homogeneity, and not intensity (which can vary due to various factors, including line-of-sight changes and stray light from nearby bright regions), to define the final confidence of any given region, this ensemble is able to provide robust, consistent delineations of the CH regions. Using the metrics of global consistency error (GCE), local consistency error (LCE), intersection over union (IOU), and the structural similarity index measure (SSIM), the method is shown to be robust to different spatial resolutions maintaining a median IOU $>0.75$ > 0.75 and minimum SSIM $>0.93$ > 0.93 even when the segmentation process was performed on an EUV image decimated from $4096\times 4096$ 4096 × 4096 pixels down to $512\times 512$ 512 × 512 pixels. Furthermore, using the same metrics, the method is shown to be robust across short timescales, producing segmentation with a mean IOU of 0.826 from EUV images taken at a 1-h cadence, and showing a smooth decay in similarity across all metrics as a function of time, indicating self-consistent segmentations even when corrections for exposure time have not been applied to the data. Finally, the accuracy of the segmentations and confidence maps are validated by considering the skewness (i.e., unipolarity) of the underlying magnetic field.


  • Neural-Based Compression Scheme for Solar Image Data

    by Ali Zafari, Atefeh Khoshkhahtinat, Jeremy A. Grajeda, Piyush M. Mehta, Nasser M. Nasrabadi, Laura E. Boucheron, Barbara J. Thompson, Michael S. F. Kirk, Daniel E. da Silva

    Studying the solar system and especially the Sun relies on the data gathered daily from space missions. These missions are data-intensive and compressing this data to make them efficiently transferable to the ground station is a twofold decision to make. Stronger compression methods, by distorting the data, can increase data throughput at the cost of accuracy which could affect scientific analysis of the data. On the other hand, preserving subtle details in the compressed data requires a high amount of data to be transferred, reducing the desired gains from compression. In this work, we propose a neural network-based lossy compression method to be used in NASA's data-intensive imagery missions. We chose NASA's Solar Dynamics Observatory (SDO) mission which transmits 1.4 terabytes of data each day as a proof of concept for the proposed algorithm. In this work, we propose an adversarially trained neural network, equipped with local and non-local attention modules to capture both the local and global structure of the image resulting in a better trade-off in rate-distortion (RD) compared to conventional hand-engineered codecs. The RD variational autoencoder used in this work is jointly trained with a channel-dependent entropy model as a shared prior between the analysis and synthesis transforms to make the entropy coding of the latent code more effective. We also studied how optimizing perceptual losses could help our neural compressor to preserve high-frequency details of the data in the reconstructed compressed image. Our neural image compression algorithm outperforms currently-in-use and state-of-the-art codecs such as JPEG and JPEG-2000 in terms of the RD performance when compressing extreme-ultraviolet (EUV) data. As a proof of concept for use of this algorithm in SDO data analysis, we have performed coronal hole (CH) detection using our compressed images, and generated consistent segmentations, even at a compression rate of $\sim 0.1$ bits per pixel (compared to 8 bits per pixel on the original data) using EUV data from SDO.


  • Open Access

    Neural-based Compression Scheme for Solar Image Data

    by Ali Zafari, Atefeh Khoshkhahtinat, Jeremy A. Grajeda, Piyush M. Mehta, Nasser M. Nasrabadi, Laura E. Boucheron, Barbara J. Thompson, Michael S. F. Kirk, Daniel da Silva

    Studying the solar system and especially the Sun relies on the data gathered daily from space missions. These missions are data-intensive and compressing this data to make them efficiently transferable to the ground station is a twofold decision to make. Stronger compression methods, by distorting the data, can increase data throughput at the cost of accuracy which could affect scientific analysis of the data. On the other hand, preserving subtle details in the compressed data requires a high amount of data to be transferred, reducing the desired gains from compression. In this work, we propose a neural network-based lossy compression method to be used in NASA's data-intensive imagery missions. We chose NASA's SDO mission which transmits 1.4 terabytes of data each day as a proof of concept for the proposed algorithm. In this work, we propose an adversarially trained neural network, equipped with local and non-local attention modules to capture both the local and global structure of the image resulting in a better trade-off in rate-distortion (RD) compared to conventional hand-engineered codecs. The RD variational autoencoder used in this work is jointly trained with a channel-dependent entropy model as a shared prior between the analysis and synthesis transforms to make the entropy coding of the latent code more effective. Our neural image compression algorithm outperforms currently-in-use and state-of-the-art codecs such as JPEG and JPEG-2000 in terms of the RD performance when compressing extreme-ultraviolet (EUV) data. As a proof of concept for use of this algorithm in SDO data analysis, we have performed coronal hole (CH) detection using our compressed images, and generated consistent segmentations, even at a compression rate of $\sim0.1$ bits per pixel (compared to 8 bits per pixel on the original data) using EUV data from SDO.