Marek Niekrasz
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Marek Niekrasz has a total of 8 co-authors. Here are the top co-authors by number of shared publications:
- Gregory A. Christoforidis
Department of Radiology, Mount Carmel Health System, Columbus, OH, United States
2 shared publications - Mihai Giurcanu
University of Chicago Department of Public Health Sciences Chicago, IL 60637
2 shared publications - Niloufar Saadat
University of Chicago, Committee on Medical Physics, Department of Radiology, Chicago, Illinois, United States
2 shared publications - Steven Roth
Michael Reese Professor of Anesthesiology and Vice Head for Research and Faculty Affairs, Department of Anesthesiology, University of Illinois College of Medicine; Professor Emeritus, University of Chicago, Chicago, Illinois, USA
2 shared publications - Timothy J. Carroll
From the Department of Radiology, University of Chicago, 5841 S Maryland Ave, Chicago, IL 60637
2 shared publications - Yong Jeong
University of Chicago, Committee on Medical Physics, Department of Radiology, Chicago, Illinois, United States
2 shared publications
Latest Publications
- Open Access
- 1 November 2023
- Published by SPIE-Intl Soc Optical Eng in Journal of Medical Imaging
- Vol. 10 (06) , 063501-14
Quantitative perfusion and water transport time model from multi b-value diffusion magnetic resonance imaging validated against neutron capture microspheres
Intravoxel incoherent motion (IVIM) is a post-processing algorithm for diffusion magnetic resonance imaging (MRI) scans introduced by Le Bihan et al.;1 it uses multiple -values to simultaneously assess tissue water diffusion and tissue perfusion. Prolonged scan times, ease of use, and direct quantification of perfusion afforded by contrast-enhanced scans largely supplanted IVIM as a clinical option. However, because newer, faster scanner hardware and software have substantially reduced scan and image processing times, many groups2 – 6 are beginning to revisit IVIM perfusion-diffusion images as a tool for evaluating neurovascular disease. If IVIM can be established as a reliable, quantitative scan protocol that requires under 5 min of scan time and no contrast, quantitative perfusion can be added to any neurovascular scan protocol. This could provide cross-sectional and longitudinal tissue perfusion maps to allow physicians to ascertain changes in perfusion that are associated with chronic disease progression, such as intracranial atherosclerotic disease, carotid stenosis, and moyamoya disease, as well as treatment response.7 – 9 Furthermore, if cerebral blood flow can be quantified in ml/100 g/min (qCBF) without organ-dependent capillary segment length and dimension assumptions, IVIM has the potential to allow multi-site cross-sectional comparison in addition to within-patient longitudinal comparison in organs other than the brain.10 – 12- 1 November 2023
- Published by SPIE-Intl Soc Optical Eng in Journal of Medical Imaging
- Vol. 10 (06) , 063501-14
Open AccessQuantitative perfusion and water transport time model from multi b-value diffusion magnetic resonance imaging validated against neutron capture microspheres
Intravoxel incoherent motion (IVIM) is a post-processing algorithm for diffusion magnetic resonance imaging (MRI) scans introduced by Le Bihan et al.;1 it uses multiple -values to simultaneously assess tissue water diffusion and tissue perfusion. Prolonged scan times, ease of use, and direct quantification of perfusion afforded by contrast-enhanced scans largely supplanted IVIM as a clinical option. However, because newer, faster scanner hardware and software have substantially reduced scan and image processing times, many groups2 – 6 are beginning to revisit IVIM perfusion-diffusion images as a tool for evaluating neurovascular disease. If IVIM can be established as a reliable, quantitative scan protocol that requires under 5 min of scan time and no contrast, quantitative perfusion can be added to any neurovascular scan protocol. This could provide cross-sectional and longitudinal tissue perfusion maps to allow physicians to ascertain changes in perfusion that are associated with chronic disease progression, such as intracranial atherosclerotic disease, carotid stenosis, and moyamoya disease, as well as treatment response.7 – 9 Furthermore, if cerebral blood flow can be quantified in ml/100 g/min (qCBF) without organ-dependent capillary segment length and dimension assumptions, IVIM has the potential to allow multi-site cross-sectional comparison in addition to within-patient longitudinal comparison in organs other than the brain.10 – 12 - Open Access
Quantitative perfusion and water transport time model from multi b-value diffusion magnetic resonance imaging validated against neutron capture microspheres
Intravoxel Incoherent Motion (IVIM) is a non-contrast magnetic resonance imaging diffusion-based scan that uses a multitude of b-values to measure various speeds of molecular perfusion and diffusion, sidestepping inaccuracy of arterial input functions or bolus kinetics in quantitative imaging. We test a new method of IVIM quantification and compare our values to reference standard neutron capture microspheres across normocapnia, CO2 induced hypercapnia, and middle cerebral artery occlusion in a controlled animal model. Perfusion quantification in ml/100g/min compared to microsphere perfusion uses the 3D gaussian probability distribution and defined water transport time as when 50% of the molecules remain in the tissue of interest. Perfusion, water transport time, and infarct volume was compared to reference standards. Simulations were studied to suppress non-specific cerebrospinal fluid (CSF). Linear regression analysis of quantitative perfusion returned correlation (slope = .55, intercept = 52.5, $R^2$= .64). Linear regression for water transport time asymmetry in infarcted tissue was excellent (slope = .59, intercept = .3, $R^2$ = .93). Strong linear agreement also was found for infarct volume (slope = 1.01, $R^2$= .79). Simulation of CSF suppression via inversion recovery returned blood signal reduced by 82% from combined T1 and T2 effects. Intra-physiologic state comparison of perfusion shows potential partial volume effects which require further study especially in disease states. The accuracy and sensitivity of IVIM provides evidence that observed signal changes reflect cytotoxic edema and tissue perfusion. Partial volume contamination of CSF may be better removed during post-processing rather than with inversion recovery to avoid artificial loss of blood signal.Open AccessQuantitative perfusion and water transport time model from multi b-value diffusion magnetic resonance imaging validated against neutron capture microspheres
Intravoxel Incoherent Motion (IVIM) is a non-contrast magnetic resonance imaging diffusion-based scan that uses a multitude of b-values to measure various speeds of molecular perfusion and diffusion, sidestepping inaccuracy of arterial input functions or bolus kinetics in quantitative imaging. We test a new method of IVIM quantification and compare our values to reference standard neutron capture microspheres across normocapnia, CO2 induced hypercapnia, and middle cerebral artery occlusion in a controlled animal model. Perfusion quantification in ml/100g/min compared to microsphere perfusion uses the 3D gaussian probability distribution and defined water transport time as when 50% of the molecules remain in the tissue of interest. Perfusion, water transport time, and infarct volume was compared to reference standards. Simulations were studied to suppress non-specific cerebrospinal fluid (CSF). Linear regression analysis of quantitative perfusion returned correlation (slope = .55, intercept = 52.5, $R^2$= .64). Linear regression for water transport time asymmetry in infarcted tissue was excellent (slope = .59, intercept = .3, $R^2$ = .93). Strong linear agreement also was found for infarct volume (slope = 1.01, $R^2$= .79). Simulation of CSF suppression via inversion recovery returned blood signal reduced by 82% from combined T1 and T2 effects. Intra-physiologic state comparison of perfusion shows potential partial volume effects which require further study especially in disease states. The accuracy and sensitivity of IVIM provides evidence that observed signal changes reflect cytotoxic edema and tissue perfusion. Partial volume contamination of CSF may be better removed during post-processing rather than with inversion recovery to avoid artificial loss of blood signal.